scholarly journals Diagnosis of Clostridioides difficile infection by analysis of volatile organic compounds in breath, plasma, and stool: A cross-sectional proof-of-concept study

PLoS ONE ◽  
2021 ◽  
Vol 16 (8) ◽  
pp. e0256259
Author(s):  
Teny M. John ◽  
Nabin K. Shrestha ◽  
Gary W. Procop ◽  
David Grove ◽  
Sixto M. Leal ◽  
...  

Clostridioides difficile infection (CDI) is an important infectious cause of antibiotic-associated diarrhea, with significant morbidity and mortality. Current diagnostic algorithms are based on identifying toxin by enzyme immunoassay (EIA) and toxin gene by real-time polymerase chain reaction (PCR) in patients with diarrhea. EIA’s sensitivity is poor, and PCR, although highly sensitive and specific, cannot differentiate infection from colonization. An ideal test that incorporates microbial factors, host factors, and host-microbe interaction might characterize true infection, and assess prognosis and recurrence. The study of volatile organic compounds (VOCs) has the potential to be an ideal diagnostic test. The presence of VOCs accounts for the characteristic odor of stool in CDI but their presence in breath and plasma has not been studied yet. A cross-sectional proof-of-concept study analyzing VOCs using selected ion flow tube mass spectrometry (SIFT-MS) was done on breath, stool, and plasma of patients with clinical features and positive PCR for CDI (cases) and compared with patients with clinical features but a negative PCR (control). Our results showed that VOC patterns in breath, stool, and plasma, had good accuracy [area under the receiver operating characteristic curve (ROC) 93%, 86%, and 91%, respectively] for identifying patients with CDI.

PLoS ONE ◽  
2018 ◽  
Vol 13 (10) ◽  
pp. e0203044 ◽  
Author(s):  
C. Stönner ◽  
A. Edtbauer ◽  
B. Derstroff ◽  
E. Bourtsoukidis ◽  
T. Klüpfel ◽  
...  

2020 ◽  
Vol 81 (6) ◽  
pp. e25-e27
Author(s):  
Rosarito Coronel Teixeira ◽  
Sandra Gonzalez ◽  
Myrian Román ◽  
Nilda Romero ◽  
Jan Bart Yntema ◽  
...  

2021 ◽  
Vol 36 (Supplement_1) ◽  
Author(s):  
Annalisa Romani ◽  
Anna Pietroboni Zaitseva ◽  
Andrea Carretta ◽  
Giulia Marrone ◽  
Chiara Vita ◽  
...  

Abstract Background and Aims Breath analysis techniques allow detection and quantification of multiple analytes present in breath to the low parts per billion volume (ppbv) level. One such technique is selected ion flow tube–mass spectrometry (SIFT-MS), which can measure numerous volatile organic compounds (VOCs) in breath on-line and in real-time. This technique has already been used in an innovative manner to monitor infectious, inflammatory status and metabolic conditions. However, there is no evidence on its use in ambulatory patients with chronic kidney disease (CKD). End-stage-renal-disease patients are characterized by "uremic halitosis" caused by the accumulation of uremic toxins that are detectable in breath such as ammonia and amines. The aims of this study are identifying a possible correlation between the detected VOCs and the presence of CKD, moreover, exploring the range of VOCs levels in patients with different CKD stage. Method In the present study, a mobile Voice200ultra® SIFT-MS instrument was made available by the Agilent SRA Division. The SIFT-MS allowed to quantify the VOCs in CKD patients. The SIFT-MS uses a precise and controlled application of “soft” chemical ionization. We enrolled 50 CKD patients, divided into two subgroups according to the estimated glomerular filtration rate (eGFR): eGFR ≥30 mL/min/1.73m2 (A) and eGFR <30 mL/min/1.73m2 (B) compared to 18 healthy subjects (C). The anamnestic data and information about any comorbidities such as arterial hypertension, cardiovascular and metabolic diseases, were collected for each patient. In order to reduce the possible interferences in the exhaled composition induced by different lifestyles, all participants were instructed to perform hygienic procedures before the test execution. The exhaled was sampled through the use of a standard spirometry mouthpiece for single use, directly connected with the input probe to the MS detector of the instrument that was able to detect more than 30 VOCs. The processing of the sample was made through the direct use of an internal comparison library (Syft library). The SIFT-MS software instantly calculates the absolute concentration of the target compounds by interpolating mass-to-charge ratios, reaction rate coefficients and branching ratios. Results Among all the VOCs analyzed, the most significant results are observed for ammonia and isoprene. In particular, the ROC curve of ammonia highlighted statistically significant differences between the three subgroups respectively A vs C AUC=0,756 p=0,001; B vs C AUC=0,942 p<0,001; A vs B AUC=0,797 p<0,001 (Figure 1). Youden index J between subgroups B and C defines the best cut-off =0,8704 associated with the criterion ammonia concentration ≤4700 ppbv with sensitivity =94,44% and specificity = 92,59%. The ROC curve of isoprene showed statistically significant differences between the three subgroups respectively B vs C AUC=0,669 p=0,050; A vs B AUC=0,691 p=0,014 (Figure 2). These data allow us to define this a highly accurate test. The same significant results were observed also with Anova one-way test that highlighted an inversely correlation between the ammonia breath concentration and eGFR, and a direct correlation between isoprene and eGFR. Conclusion This preliminary data confirms the potential utility of SIFT-MS for the CKD diagnosis and the possible relation between the VOCs concentration and CKD stage. This exam could be a new, non-invasive, fast-performing diagnostic technique with real-time results useful for clinical management of CKD. The study was inserted in the projects: “MioMenù: nuova filiera dell’agro-industria e una cucina tracciata natura/benessere- Lazio Region” and “BioSynOL- Oil and Legumes: biodynamic and synergistic crops for naturally fortified foods and innovative products for health and sport – G.O.Tuscany Region”.


The Lancet ◽  
1999 ◽  
Vol 353 (9168) ◽  
pp. 1930-1933 ◽  
Author(s):  
Michael Phillips ◽  
Kevin Gleeson ◽  
J Michael B Hughes ◽  
Joel Greenberg ◽  
Renee N Cataneo ◽  
...  

2000 ◽  
Vol 104 (48) ◽  
pp. 11318-11327 ◽  
Author(s):  
Michael H. Cohen ◽  
Cynthia Barckholtz ◽  
Brian T. Frink ◽  
Joshua J. Bond ◽  
C. Michael Geise ◽  
...  

2021 ◽  
Author(s):  
Banrida Wahlang ◽  
Tyler C. Gripshover ◽  
Hong Gao ◽  
Tatiana Krivokhizhina ◽  
Rachel J. Keith ◽  
...  

ABSTRACTOccupational exposures to volatile organic compounds (VOCs) have been associated with numerous health complications including steatohepatitis and liver cancer. However, the potential impact of environmental/residential VOC exposures on liver health and function is largely unknown. To address this knowledge gap, the objective of this cross-sectional study is to investigate associations between VOCs and liver injury biomarkers in community residents. Subjects were recruited from six Louisville neighborhoods, and informed consent was obtained. Exposure biomarkers included 16 creatinine-adjusted urinary metabolites corresponding to 12 parent VOCs. Serological disease biomarkers measured included cytokertain-18 (K18 M65 and M30), liver enzymes and direct bilirubin. Associations between exposure and disease biomarkers were assessed using generalized linear models. Smoking status was confirmed through urinary cotinine levels. The population comprised of approximately 60% females and 40% males; White persons accounted 78% of the population; with more nonsmokers (n=413) than smokers (n=250). When compared to nonsmokers, Males (45%) and Black persons (26%) were more likely to be smokers. In the overall population, metabolites of acrolein, acrylonitrile, acrylamide, 1,3-butadiene, crotonaldehyde, styrene and xylene were positively associated with alkaline phosphatase (ALP). These associations persisted in smokers, with the exception of crotonaldehyde, and addition of N,N dimethylformamide and propylene oxide metabolites. Although no positive associations were observed for K18 M30, the benzene metabolite was positively associated with bilirubin, irrespective of smoking status. Taken together, the results demonstrated that selected VOCs were positively associated with liver injury biomarkers. These findings will enable better risk assessment and identification of populations vulnerable to liver disease.


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