Development and Characterization of DNA Hybridization Reaction on PDMS Microchip

Author(s):  
Xiang Chen ◽  
Da-Fu Cui ◽  
Li Wang ◽  
Ming Wang ◽  
Qiang Zhao
2002 ◽  
Vol 01 (05n06) ◽  
pp. 663-666
Author(s):  
DO-KYUN KIM ◽  
YOUNG-SOO KWON ◽  
EIICHI TAMIYA

In this research, we report the characterization of the probe and target oligonucleotide hybridization reaction using the evanescent field microscopy. For detection of DNA hybridization assay, a high-density array of sensor probes were prepared by randomly distributing a mixture of particles immobilized with oligonucleotides for DNA chip applications. With the evanescent field excitation and real-time detection method, we suggest that a very sharp discrimination of bulk fluorescence against surface excitation in combination with high excitation intensities can be achieved.


Plant Disease ◽  
1997 ◽  
Vol 81 (8) ◽  
pp. 901-904 ◽  
Author(s):  
Claudia Goyer ◽  
Carole Beaulieu

Ten Streptomyces isolates from common scab lesions on carrots (Daucus carota) were characterized. Morphological and physiological characterization of the carrot isolates established that they were closely related to S. scabies. DNA-DNA hybridization studies were carried out between DNA from the carrot isolates and DNA from two potato strains belonging to the two genetic clusters of S. scabies. Most of the carrot isolates exhibited a high level of DNA relatedness (average of 90%) to strain EF-54, which belongs to genetic cluster 1 of S. scabies. Three carrot isolates could not be included in either S. scabies genetic cluster 1 or 2. The pathogenicity of six S. scabies isolates from potato or carrot, two isolates of S. caviscabies, and one isolate of S. acidiscabies was determined on potato, carrot, radish, beet, turnip, and parsnip. All S. scabies isolates were pathogenic on carrot and radish, but pathogenicity on beet, parsnip, turnip, and potato was variable. Even though S. acidiscabies and S. caviscabies until now have been isolated only from potato, we demonstrated that isolates of these species also could infect other crops, such as radish, carrot, parsnip, and turnip.


2003 ◽  
Vol 19 (2) ◽  
pp. 95-102 ◽  
Author(s):  
Marin Gheorghe ◽  
Anthony Guiseppi-Elie

2007 ◽  
Vol 59 (1) ◽  
pp. 13-22 ◽  
Author(s):  
M. Kojic ◽  
Jelena Lozo ◽  
Jelena Begovic ◽  
B. Jovcic ◽  
Lj. Topisirovic

Five bacteriocin-producing lactococci isolates from traditionally prepared kefir were determined as Lactococcus lactis subsp. lactis. The analyzed isolates showed different plasmid profiles and no cross inhibition between them was detected. Moreover, natural isolate BGKF26 was resistant to the antimicrobial activity of nisin producing strain NP45. Plasmid curing experiments revealed that the genes encoding bacteriocin and proteinase production are located on separate genetic elements, except in BGKF26. Production of the tested bacteriocins depends on the concentration of casitone or triptone in the medium. Higher concentrations of casitone or triptone induce bacteriocin activity. Our DNA-DNA hybridization analyses suggest that the analyzed antimicrobial compounds probably are lactococcin-like bacteriocins.


Langmuir ◽  
2006 ◽  
Vol 22 (26) ◽  
pp. 11245-11250 ◽  
Author(s):  
Jung-Hoon Yang ◽  
Kwang-Soup Song ◽  
Guo-Jun Zhang ◽  
Munenori Degawa ◽  
Yoshinori Sasaki ◽  
...  

1988 ◽  
Vol 26 (10) ◽  
pp. 1993-2000 ◽  
Author(s):  
J J Farmer ◽  
F W Hickman-Brenner ◽  
G R Fanning ◽  
C M Gordon ◽  
D J Brenner

2002 ◽  
Vol 737 ◽  
Author(s):  
Wensha Yang ◽  
Orlando Auciello ◽  
James E. Butler ◽  
Wei Cai ◽  
John A. Carlisle ◽  
...  

ABSTRACTNanocrystalline diamond thin films of sub-micron thickness have been covalently modified with DNA oligonucleotides. Quantitative studies of hybridization of surface-bound oligonucleotides with fluorescently tagged complementary and non-complementary oligonucleotides were performed. The results show no detectable nonspecific adsorption, with extremely good selectivity between matched and mismatched sequences. Impedance spectroscopy measurements were made of DNA-modified boron-doped nanocrystalline diamond films. The results show that exposure to non-complementary sequences induce only small changes in impedance, while complementary DNA sequences produce a pronounced decrease in impedance. The combination of high stability, selectivity, and the ability to directly detect DNA hybridization via electrical means suggest that diamond may be an ideal substrate for continuously-monitoring biological sensors.


2004 ◽  
Vol 108 (33) ◽  
pp. 12375-12380 ◽  
Author(s):  
So-Jung Park ◽  
Anne A. Lazarides ◽  
James J. Storhoff ◽  
Lorenzo Pesce ◽  
Chad A. Mirkin

1988 ◽  
Vol 78 (4) ◽  
pp. 377-381 ◽  
Author(s):  
M. Andersson ◽  
D. C. Page ◽  
L. G. Brown ◽  
K. Elfving ◽  
A. de la Chapelle
Keyword(s):  

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