Biogeomes of hydrosphere and land as elements of the biosphere structure

2015 ◽  
Vol 27 (1-2) ◽  
pp. 5-15
Author(s):  
A. A. Protasov
Keyword(s):  
Abiotic Factors ◽  
Level Structure ◽  
Structure And Function ◽  
Woody Vegetation ◽  
Strong Impact ◽  
Ecosystem Level ◽  
And Function ◽  
Natural Groups ◽  
Ecological Convergence

Ecosystems as the smallest unit in the structure of the biosphere form natural groups with similar nonliving or inert components (geome) and leaving, biotic (biome) as a result of the ecological convergence. Thus it is formed following after ecosystem level structure of the biosphere – biogeomes or complexes of similar in its structure and function ecosystems. It is proposed unit classification of 12 biogeomes of hydrosphere and land, combining with three types of ecosystems: biotic, oligobiotic and subbiotic types. The biotic type combine with ecosystems controlled by leaving components as well as woody vegetation or hermatypic corrals. The ecosystems of oligobiotic type have strong impact of abiotic factors but biotic ones are important too. It is grass ecosystems on the land, and shelf ecosystems of ocean. In subbiotic type of ecosystems strongly prevail in its habitus abiotic components. It is ecosystems of deserts, and ocean deep bottom or pelagic ocean ecosystems. The evolution of biosphere was lead as well as to new local ecosystems divergently and convergently to formation limit number of ecosystems types, biogeomes. There is reason to believe it possible to form a new scientific section – biogeomics because there is a particular object of it study – the biogeome.

Ecosystems processes

2018 ◽  
Author(s):  
Karen J. Esler ◽  
Anna L. Jacobsen ◽  
R. Brandon Pratt
Keyword(s):  
Ecosystem Function ◽  
Mineral Nutrients ◽  
Structure And Function ◽  
Water Dynamics ◽  
Ecosystem Level ◽  
Key Drivers ◽  
And Function ◽  
Mediterranean Type Ecosystems

Ecosystems are assemblages of organisms interacting with one another and their environment (Chapter 1). Key to the functioning of ecosystems is the flow of energy, carbon, mineral nutrients, and water in these systems. The numerous processes involved are chiefly driven by climate, soil, and fire (Chapter 2). In cases where the key drivers are the same in different areas, then ecosystems should converge in their structure and function, which has been a motivation for comparing across mediterranean-type climate (MTC) regions. Convergence of MTC regions has been evaluated, but such comparisons at the ecosystem level are challenging because ecosystems are complex and dynamic entities. Here we review carbon, nutrient, and water dynamics of mediterranean-type ecosystems in the context of ecosystem function. As nutrients in soils are low in some MTC regions, we review how this has led to unique adaptations to meet this challenge.

scholarly journals IX. On the structure and development of the liver

1849 ◽  
Vol 139 ◽  
pp. 109-137 ◽  
Keyword(s):  
Royal Society ◽  
A Priori ◽  
Structural Features ◽  
Structure And Function ◽  
Conclusive Evidence ◽  
Interesting Paper ◽  
Biliary Ducts ◽  
And Function ◽  
Do So

In venturing to offer a second communication to the Royal Society respecting the structure of the liver, I feel the rather anxious to do so, that I may have an opportunity of correcting an error and supplying a deficiency which existed in my previous paper. In the following observations I purpose to present some account of the structure of the liver examined in the ascending series of animals, and also to describe the several stages of its evolution in the embryo; in this way I trust I may be able to exhibit the characteristic structural features of the organ as it exists in Man and the higher animals, and also to determine the true place which ought to be assigned to it in a classification of the various glandular organs occurring in the same. I am not aware that any detailed account of the structure of the liver has been recently published, except that by M. Natalis Guillot, which however, so far as I comprehend it, does not seem to be one that can be readily accepted; the idea that the minute biliary ducts and lymphatics originate together in a common net-work, is à priori improbable, and entirely opposed to conclusive evidence (as I think), which will be subsequently adduced. A very interesting paper on the structure and function of the liver has also appeared in the 4th volume of the Guy’s Hospital Reports, from the pen of Dr. Williams; to his labours I shall several times have occasion to refer, but it will be seen that I differ from him in several particulars, especially respecting the importance of the basement or limitary membrane.

scholarly journals Comprehensive in silico Analysis of IKBKAP gene that could potentially cause Familial dysautonomia

2018 ◽  
Author(s):  
Mujahed I. Mustafa ◽  
Enas A. Osman ◽  
Abdelrahman H. Abdelmoneiom ◽  
Dania M. Hassn ◽  
Hadeel M. Yousif ◽  
...  
Keyword(s):  
In Silico ◽  
Genetic Disorder ◽  
In Silico Analysis ◽  
Familial Dysautonomia ◽  
Structural Effect ◽  
Structure And Function ◽  
Genetic Studies ◽  
And Function ◽  
Silico Analysis

AbstractBackgroundFamilial dysautonomia (FD) is a rare neurodevelopmental genetic disorder within the larger classification of hereditary sensory and autonomic neuropathies. We aimed to identify the pathogenic SNPs in IKBKAP gene by computational analysis software’s, and to determine the structure, function and regulation of their respective proteins.Materials and MethodsWe carried out in silico analysis of structural effect of each SNP using different bioinformatics tools to predict SNPs influence on protein structure and function.Result41 novel mutations out of 973 nsSNPs that are found be deleterious effect on the IKBKAP structure and function.ConclusionThis is the first in silico analysis in IKBKAP gene to prioritize SNPs for further genetic studies.

scholarly journals Does Thermal Stress Modulate the Biochemical and Physiological Responses of Ruditapes Decussatus Exposed to the Progestin Levonorgestrel?

2021 ◽  
Author(s):  
Asma Mannai ◽  
Leila HMIDA ◽  
Zied BOURAOUI ◽  
Hamadi GUERBEJ ◽  
Tahar GHARRED ◽  
...  
Keyword(s):  
Chronic Conditions ◽  
Abiotic Factors ◽  
Physiological Responses ◽  
Structure And Function ◽  
Warning Sign ◽  
Ruditapes Decussatus ◽  
Physiological Processes ◽  
Lysosomal Membrane Stability ◽  
And Function ◽  
Increasing Temperature

Abstract The combined effects of the abiotic factors such as temperature and synthetic progestins on the biochemical and physiological performances of marine clam Ruditapes decssatus under sub-chronic conditions are poorly studied. Here, we investigated the effects of levonorgestrel (1000 ng/l) alone or combined with increasing temperature of 20, 24 and 28°C on the biochemical and physiological responses and the gonad histology of the clam (Ruditapes decussatus) for 28 days. Our results revealed that, in clams treated with levonorgestrel (LNG) alone, there was an impairment of the defense against oxidative stress related to the inductions of CAT, GST and PSH, a reduction in the lysosomal membrane stability, a physiological disturbance via an increase in the level of estradiol, a decrease in the number of gonad oocytes and a reduction in vitellogenin like protein. Furthermore, exposure to heat stress of 20°C, 24°C and 28°C, alone or in combination with LNG, enhanced SOD antioxidant activity which was ineffective in preventing lipoperoxidation and altered clam’s physiological processes of reproduction via dramatic reduction of gonad oocyte numbers and of vitellogenin like protein reserves. Overall, these findings can be taken as a warning sign of temperature and levonorgestrel progestin effect that can lead to effective changes in the structure and function of target vital organs, such as the gonads of the clam Ruditapes decussatus, and this may have implications for the whole organism and populations.

scholarly journals Structure-Function Relationship of the Disintegrin Family: Sequence Signature and Integrin Interaction

2021 ◽  
Vol 8 ◽  
Author(s):  
Ariana A. Vasconcelos ◽  
Jorge C. Estrada ◽  
Victor David ◽  
Luciana S. Wermelinger ◽  
Fabio C. L. Almeida ◽  
...  
Keyword(s):  
Snake Venom ◽  
Disulfide Bonds ◽  
Structure And Function ◽  
Matrix Interaction ◽  
Cell Matrix ◽  
Snake Venom Metalloproteinase ◽  
Function Relationship ◽  
And Function ◽  
Relationship Of

Disintegrins are small cysteine-rich proteins found in a variety of snake venom. These proteins selectively modulate integrin function, heterodimeric receptors involved in cell-cell and cell-matrix interaction that are widely studied as therapeutic targets. Snake venom disintegrins emerged from the snake venom metalloproteinase and are classified according to the sequence size and number of disulfide bonds. Evolutive structure and function diversification of disintegrin family involves a stepwise decrease in the polypeptide chain, loss of cysteine residues, and selectivity. Since the structure elucidation of echistatin, the description of the structural properties of disintegrins has allowed the investigation of the mechanisms involved in integrin-cell-extracellular matrix interaction. This review provides an analysis of the structures of all family groups enabling the description of an expanded classification of the disintegrin family in seven groups. Each group presents a particular disulfide pattern and sequence signatures, facilitating the identification of new disintegrins. The classification was based on the disintegrin-like domain of the human metalloproteinase (ADAM-10). We also present the sequence and structural signatures important for disintegrin-integrin interaction, unveiling the relationship between the structure and function of these proteins.

Community Ecology of Stream Fishes: Concepts, Approaches, and Techniques

2010 ◽  
Keyword(s):  
Community Ecology ◽  
Fish Assemblages ◽  
Abiotic Factors ◽  
Biotic Interactions ◽  
Theoretical Models ◽  
Field Studies ◽  
Structure And Function ◽  
Activity Levels ◽  
Ecological Communities ◽  
And Function

<em>Abstract</em>.—Ecological communities are structured by a combination of stochastic and deterministic processes, the latter including both abiotic factors and biotic interactions such as predation. Many studies, mostly in relatively stable ecosystems such as lakes, have demonstrated top-down effects on community structure and function. Communities or species in dynamic nonequilibrium ecosystems such as streams may also respond strongly to predation pressure. In this chapter, we review experimental research on effects of predation on fish assemblages in lotic systems, focusing on developments in the decades since Matthews and Heins (1987). Direct experimental evidence indicates that predators strongly affect lotic fish assemblages via direct and indirect pathways of lethal and nonlethal interactions. Across studies, predators consistently reduced prey density, caused changes in prey habitat use, and decreased prey activity levels. Predators may also affect aspects of prey life history and reproduction in streams, and the presence of multiple predator species may result in prey risk enhancement. Our review identified five areas needing additional research that may lead to further advances in stream fish community ecology: (1) linking predation experiments with theoretical models of fish assemblage structure and function, (2) quantifying functional traits of predators and prey, (3) manipulating whole assemblages and testing multispecies interactions, (4) understanding the role of predation in human-modified ecosystems, and (5) application of analytical approaches that facilitate integration among these areas of research as well as with observational field studies.

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