Potato viruses and resistance genes in potato

2012 ◽  
Vol 60 (3) ◽  
pp. 283-298 ◽  
Author(s):  
R. Ahmadvand ◽  
A. Takács ◽  
J. Taller ◽  
I. Wolf ◽  
Z. Polgár
Keyword(s):  
Potato Virus ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Potato Leaf ◽  
Potato Virus S ◽  
Potato Virus A ◽  
The World ◽  
Potato Virus M ◽  
Cultivated Potatoes

Potato (Solanum tuberosum L.) is the fourth most important food crop in the world. It is the most economically valuable and well-known member of the plant family Solanaceae. Potato is the host of many pathogens, including fungi, bacteria, Phytoplasmas, viruses, viroids and nematodes, which cause reductions in the quantity and quality of yield. Apart from the late blight fungus [Phytophthora infestans (Mont.) de Bary] viruses are the most important pathogens, with over 40 viruses and virus-like pathogens infecting cultivated potatoes in the field, among which Potato virus Y (PVY), Potato leaf roll virus (PLRV), Potato virus X (PVX), Potato virus A (PVA), Potato virus S (PVS) and Potato virus M (PVM) are some of the most important viruses in the world. In this review, their characteristics and types of resistance to them will be discussed.

scholarly journals Incidence of Potato Viruses in Different Districts of Khyber Pakhtunkhawa, Pakistan

2013 ◽  
Vol 2 (1) ◽  
pp. 32-36 ◽  
Author(s):  
Zishan Gul ◽  
Aftab A. Khan ◽  
Asif U. R. Khan ◽  
Zaheer U. Khan
Keyword(s):  
Potato Virus ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Potato Leaf ◽  
Potato Leave ◽  
Potato Virus S ◽  
Immunosorbant Assay ◽  
Potato Virus A ◽  
Potato Virus M ◽  
Potato Crops

Three consecutive potato crops are grown annually in Pakistan and Khyber Pakhtunkhawa (KPK) province is the main source for seed tubers. During the year 2010, 240 symptomatic and viral susceptible potato leave samples were collected from Swat, Dir, Abbottabad and Mansehra and serologically confirmed through Double Antibody Sandwich (DAS) Enzyme Linked Immunosorbant Assay (ELISA) against Potato virus X (PVX), Potato virus Y (PVY), Potato leaf roll virus (PLRV), Potato virus M (PVM), Potato virus S (PVS) and Potato virus A (PVA). The presence or absence of viruses was confirmed by observing the yellow and white color in ELISA plates respectively. According to ELISA results, overall percentage incidence of viral diseases was found highest in Swat (65%) followed by Mansehra (61%), Dir (53%) and Abbottabad (43.33%) while PVY and PVS were dominant in Swat (26.66%), Dir (20%), Mansehra (15%) and Abbottabad (21.66%) respectively. PVX was not detected in Abbottabad while Swat samples seemed to be free from PVM and PVA.

scholarly journals Presence and distribution of economically important potato viruses in Montenegro

2011 ◽  
Vol 26 (2) ◽  
pp. 117-127
Author(s):  
Jelena Zindovic
Keyword(s):  
Potato Virus ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Enzyme Linked Immunosorbent Assay ◽  
Potato Leaf ◽  
Potato Virus S ◽  
Potato Varieties ◽  
Potato Viruses ◽  
Das Elisa

The research was carried out, in the period 2002-2004 in order to determine the presence and distribution of potato viruses at 12 different locations and on 9 different potato varieties grown in Montenegro. The research included collecting of samples in seed potato crops and testing of six economically important potato viruses: Potato leaf roll virus (PLRV), Potato virus Y (PVY), Potato virus X (PVX), Potato virus S (PVS), Potato virus A (PVA) i Potato virus M (PVM). Using the direct enzyme-linked immunosorbent assay (DAS-ELISA) and commercial antisera specific for six potato viruses, it was found that PVY was the most frequent virus during the three-year research period. The second frequent virus was PVS, followed by PVA, PLRV, PVM and PVX. Single and mixed infections were detected, and the most prevalent were the single infections of PVY. Also, in the period 2002-2004, PVY had the highest distribution and the number of present viruses was different at different localities and on different potato varieties. Further investigations were related to detailed characterization of the most prevalent virus (PVY), which is at the same time economically the most important one. Serological characterization of PVY was performed utilizing DAS-ELISA kit with commercial monoclonal antibodies specific for detection of the three strain groups of PVY, and the two strain groups - necrotic (PVYN/PVYNTN) and common (PVYO), were identified. Necrotic strains were prevalent in 2002 and 2004, while in 2003 PVYO was the most frequent strain in virus population. The presence of stipple streak strain (PVYC) was not detected in any of the tested samples.

scholarly journals Prevalence, distribution and control of six major potato viruses in Kenya

2020 ◽  
Author(s):  
John Onditi ◽  
Moses Nyongesa ◽  
René van der Vlugt
Keyword(s):  
Potato Virus ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Plant Viruses ◽  
Multiple Infections ◽  
Potato Seed ◽  
Potato Leaf ◽  
Potato Virus S ◽  
Potato Viruses ◽  
Virus Prevalence

AbstractIn most developing countries, farmers lack sufficient supply of certified or healthy potato seed tubers. Hence, they often plant their own saved ware potato tubers, a practice that is known to contribute to spread and increase the prevalence of plant viruses. In this study, we proposed options for managing the virus based on the knowledge obtained from surveys of virus prevalence and distribution in potato cultivars grown under such conditions. Potato leaf samples randomly collected from 354 farms in five major potato-growing counties in Kenya were tested for six potato viruses; potato virus Y (PVY), potato leaf roll virus (PLRV), potato virus X (PVX), potato virus M (PVM), potato virus A (PVA) and potato virus S (PVS) through DAS-ELISA. Virus prevalence in the fields was high; 72.9% of the samples were positive for at least one of the six viruses; and 55.9% showed multiple infections. A follow-up survey conducted during three consecutive seasons, in two of the five counties, revealed that virus prevalence fluctuated across seasons. This suggested that updated information on virus prevalence might be of value for designing a virus control strategy. Distribution maps showed the presence of the viruses restricted to specific geographic regions, an indication of where control efforts should be directed. Four cultivars, Sherekea, Shangi, Kenya Karibu and Asante, grown at a high virus-prevalent area, showed low values of average ELISA absorbance (OD), suggest a field resistance to the viruses. This study demonstrated that knowledge of prevalence and distribution may be of value to identify and recommend virus resistant cultivars to replace susceptible ones, especially in the virus hotspot areas.

scholarly journals Ocorrência de vírus em batata em sete estados do Brasil

2009 ◽  
Vol 27 (4) ◽  
pp. 490-497 ◽  
Author(s):  
Antônio Carlos de Ávila ◽  
Paulo Eduardo de Melo ◽  
Lindolfo R Leite ◽  
Alice K Inoue-Nagata
Keyword(s):  
Potato Virus ◽  
Potato Virus Y ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Potato Leaf Roll Virus ◽  
Rt Pcr ◽  
Potato Leaf ◽  
Potato Virus S ◽  
Das Elisa

As viroses causam rápida degenerescência dos tubérculos-sementes de batata. Em condições tropicais, em que a presença de afídeos vetores é constante e a estrutura das populações de vírus é dinâmica, a pressão das doenças é enorme. Conhecer essa dinâmica é uma ferramenta importante para a sustentabilidade da produção de batata. Realizou-se um levantamento abrangente da ocorrência de viroses em batata no Brasil, além de estudar-se a distribuição das estirpes de Potato virus Y (PVY) associadas ao mosaico da batata. Em 2005 e 2006 foram visitadas lavouras em sete estados brasileiros, coletando-se folíolos com sintomas de viroses (1.256 amostras) e amostras aleatórias (360 amostras). Foi feita também uma estimativa visual da incidência de mosaico e enrolamento-das-folhas em vários dos campos visitados. Das 1.256 amostras suspeitas, 840 apresentaram reação positiva em teste sorológico para PVY (66,9%), 128 para Potato leaf roll virus (PLRV) (10,2%), 79 para Potato virus S (PVS) (6,3%) e nenhuma para Potato virus X (PVX). Os resultados dos testes de detecção por DAS-ELISA, biológico e RT-PCR mostraram a presença quase absoluta do subgrupo necrótico de PVY, em sua maioria PVY NTN. A análise de uma sub-amostragem em todos os municípios visitados confirmou que essa variante está hoje presente nos sete estados visitados. Amostras de PVY NTN foram obtidas das cultivares Asterix, Atlantic, Agata, Achat, Baronesa, Baraka, Bintje, Caesar, Cupido, Marijke, Monalisa, Panda e Vivaldi, que apresentaram diferentes níveis de suscetibilidade. As amostras aleatórias revelaram um quadro muito similar ao encontrado com as amostras sintomáticas. PLRV foi identificado em MG, BA, PR e SC, em várias lavouras de forma muito freqüente. PVS foi identificado nesses mesmos estados e também em SP. PVX foi detectado em apenas uma amostra tomada ao acaso em Serra do Salitre (MG). O contraste entre a avaliação visual dos sintomas e os resultados do teste de detecção por ELISA revelou a possibilidade de infecção latente por PVY em níveis relevantes na cultivar Asterix.

Molecular Characterization of Potato leafroll virus, Potato virus A, and Potato virus X Isolates from Potatoes in Alaskan Cities and Villages

2011 ◽  
Vol 12 (1) ◽  
pp. 39 ◽  
Author(s):  
Nancy L. Robertson ◽  
Jeffrey Smeenk ◽  
Jodie M. Anderson
Keyword(s):  
Molecular Characterization ◽  
Potato Virus ◽  
Potato Virus X ◽  
Potato Leafroll Virus ◽  
First Report ◽  
Potato Virus A ◽  
Potato Viruses ◽  
The World ◽  
Leafroll Virus

Although all three viruses are commonly found in potatoes throughout the world, this is the first report of potato viruses from Alaska to be sequenced and molecularly analyzed for comparisons with known viruses. Accepted for publication 17 January 2011. Published 9 February 2011.

scholarly journals Antiviral and Antiviroid Activity of MAP-Containing Extracts from Mirabilis jalapa Roots

Plant Disease ◽  
1999 ◽  
Vol 83 (12) ◽  
pp. 1116-1121 ◽  
Author(s):  
Jorge M. Vivanco ◽  
Maddalena Querci ◽  
Luis F. Salazar
Keyword(s):  
Potato Virus ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Antiviral Effect ◽  
Potato Spindle Tuber Viroid ◽  
Antiviral Protein ◽  
Potato Leaf ◽  
Mirabilis Jalapa ◽  
Spot Hybridization ◽  
Mirabilis Antiviral Protein

Extracts of Mirabilis jalapa (Nyctaginaceae), containing a ribosome inactivating protein (RIP) called Mirabilis antiviral protein (MAP), were tested against infection by potato virus X, potato virus Y, potato leaf roll virus, and potato spindle tuber viroid. Root extracts of M. jalapa sprayed on test plants 24 h before virus or viroid inoculation inhibited infection by almost 100%, as corroborated by infectivity assays and the nucleic acid spot hybridization test. Antiviral activity of MAP extracts was observed against mechanically transmitted viruses but not against aphid-transmitted viruses. Purified MAP showed the same antiviral effect as the crude extracts.

scholarly journals Field Evaluation and Enzyme-Linked Immunosorbent Assay Detection of Potato Leaf Roll Virus, Potato Virus X and Potato Virus Y in Potato Germplasm

2017 ◽  
Vol 9 (7) ◽  
pp. 229 ◽  
Author(s):  
Romana Anjum ◽  
M. Aslam Khan ◽  
Kolawole Oluwaseun Olawale ◽  
Raheel Baber
Keyword(s):  
Immunosorbent Assay ◽  
Potato Virus ◽  
Potato Virus Y ◽  
Rating Scale ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Potato Leaf Roll Virus ◽  
Enzyme Linked Immunosorbent Assay ◽  
Potato Leaf ◽  
Potato Varieties

Polerovirus: potato leaf roll virus (PLRV), Potyvirus: potato virus Y (PVY) and Potexvirus: potato virus X (PVX) is more destructive and well distributed throughout the Pakistan. Incidence has been reported to be as high as 90%, 25%, and ≥ 15%, respectively in the potato growing regions. To find out the source of resistance, twenty-nine virus free potato varieties were grown under field conditions with good agricultural practices. The disease severity of PLRV, PVY and PVX was recorded to determine the level of resistance of the potato varieties according to the disease rating scale. Infectivity and biological assay of all twenty-nine varieties were done in green house on potato, Datura stramonium, Nicotiana glutinosa and Physalis floridana. Non-inoculated plants were served as control. Leaf samples from potato varieties were collected for serological detection of PLRV, PVY and PVX by Double antibody sandwich Enzyme-Linked Immunosorbent Assay (DAS-ELISA). Out of twenty nine varieties, none of the variety was resistant to PLRV although three varieties; Mirrato, 394021-120 and Orla were moderately resistant. Only FD 48-4 and TPS 9813 showed resistance to PVX and PVY. While FD 3-10, FD 9616 and FD 37-13 were moderately to PVX and PVY. Rest of the varieties was found susceptible to all three viruses.

scholarly journals Effectiveness of Positive Selection in Managing Seed-Borne Potato Viruses

2018 ◽  
Vol 10 (3) ◽  
pp. 71
Author(s):  
Gidraf Onduru Okeyo ◽  
Kalpana Sharma ◽  
Elly Atieno ◽  
Rama Devi Narla ◽  
Douglas Watuku Miano ◽  
...  
Keyword(s):  
Positive Selection ◽  
Potato Virus ◽  
Leaf Roll ◽  
Multiple Infections ◽  
Potato Leaf ◽  
Potato Virus S ◽  
Infected Seed ◽  
Potato Viruses ◽  
Field Generation ◽  
Seed Tubers

Potato productivity in Kenya has remained below the potential due to the use of infected seed tubers especially by seed borne viruses. A study was carried out to asses the effectiveness of Positive Selection (PS) in managing seed borne potato viruses. Sprouted seed potato tubers of nine genotypes; three commercial varieties and six advanced International Potato Center (CIP) clones were screened in the field for two seasons, Field Generation Three (FG3) and Field Generation Four (FG4), respectively. In each season, experimental plots were divided into two sub-plots in which one sub-plot was planted with seed tubers sourced through Random Seed Selection (RSS) and the other with seed tuber sourced through Positive Selection (PS). Positive selection plots had low visual virus incidences, high number of tubers per hill and yield (t/ha) in both FG3 and FG4 growing seasons irrespective of the genotypes. ELISA test also revealed that Potato Virus S (PVS) (78%) was the most predominant virus followed by Potato Virus Y (PVY) (20%), Potato Leaf Roll Virus (PLRV) (16%) and Potato Virus M (PVM) (9%) in RSS plots either with single or multiple infections. Positive Selection plots recorded low virus incidences of PVS (47%), and PVY, PLRV and PVM were absent in the tubers tested with ELISA. This study concludes that Positive Selection is a good management strategy to manage the seed borne potato viruses, and if adopted, small holder farmers can reduce the yield losses arising from use of virus infected seed tubers.

scholarly journals Virus Incidence Associated with Native Potato Yield in Microcenters of Potato Genetic Diversity of Bolivian

2021 ◽  
Author(s):  
Mario Coca Morante ◽  
Evelyn Coca Salazar ◽  
Javier Burgos Villegas ◽  
Nelson Tapia Ponce
Keyword(s):  
Genetic Diversity ◽  
Viral Infection ◽  
Potato Virus ◽  
Leaf Roll ◽  
Potato Virus X ◽  
Potato Yield ◽  
Potato Leaf ◽  
La Paz ◽  
Andean Potato ◽  
Das Elisa

AbstractIn the Bolivian Andean region, a diversity native potatoes species (Solanum spp) are cultivated. Areas where many types of native potato are grown are known as microcentres of potato genetic diversity. However, yields are low in these places, apparently related to viral infections. The incidence of the potato-affecting viruses Potato Virus X (PVX), Potato Virus Y (PVY), Potato Leaf Roll Virus (PLRV), Andean Potato Latent Virus (APLV) and Andean Potato Mottle Virus (APMoV) was examined by DAS-ELISA in microcentres of two high Andean regions of Bolivia, i.e. an Aymara culture region in the north of La Paz, and a Quechua culture region in the Dept. of Cochabamba. The relationship between viral incidence and potato yield was explored as well. The presence of all five viruses was detected in both regions, except APMoV in the Aymara region. The mean overall incidence of viral infection was greater in the Aymara than in the Quechua region. The most commonly detected viruses were PVX, PVY and APLV. Mix-infections of PVY + PVX and PVY + PLRV were most common in the Aymara region, and PVX + APLV and PVX + APMoV in the Quechua region. Potato yield was less in Aymara than in Quechua region and it was correlated to higher incidence of PVY and PVX in Aymara region. Low yields and high incidence of viral infection seems to be related to the ancestral management by planting native seed potatoes of poor quality. In conclusion, four of the five viruses sought were detected in the Aymara region, and all five in the Quechua region, although the overall incidence of viral infection was greater in the Aymara region, where the yields recorded were also lower.Resumen.En la región andina boliviana se cultivan una diversidad de especies nativas de papa (Solanum spp). Las áreas donde se cultivan muchos tipos de papa nativa se conocen como microcentros de diversidad genética de la papa. Sin embargo, los rendimientos son bajos en estos lugares, aparentemente relacionados con infecciones virales. Se examinó la incidencia de los virus que afectan a la papa, el Virus X de la Papa (PVX), Virus Y de la Papa (PVY), Virus del Rollo de hoja de Papa (PLRV), Virus Latente de la Papa Andina (APLV) y Virus moteado de la Papa Andina(APMoV) por DAS-ELISA en microcentros de dos regiones altoandinas de Bolivia, por ejemplo, una región de cultivo Aymara en el norte de La Paz y una región de cultivo Quechua en el Departamento de Cochabamba. También se exploró la relación entre la incidencia viral y el rendimiento de la papa. Se detectó la presencia de los cinco virus en ambas regiones, excepto APMoV en la región Aymara. La incidencia global media de infección viral fue mayor en la región Aymara que en la región Quechua. Los virus más comúnmente detectados fueron PVX, PVY y APLV. Las infecciones por mezcla de PVY + PVX y PVY + PLRV fueron más comunes en la región Aymara, y PVX + APLV y PVX + APMoV en la región Quechua. El rendimiento de papa fue menor enAaymara que en la región Quechua y se correlacionó con una mayor incidencia de PVY y PVX en la región Aymara. Estamos evidenciando que los bajos rendimientos y la alta incidencia de infección viral parecen estar relacionados con el manejo ancestral mediante la siembra de papas de semilla nativa de mala calidad. En conclusión, cuatro de los cinco virus buscados se detectaron en la región Aymara, y los cinco en la región Quechua, aunque la incidencia general de infección viral fue mayor en la región Aymara, donde los rendimientos registrados también fueron menores.

scholarly journals In silico Characterization and Homology Modelling of Potato Leaf Roll Virus (PLRV) Coat Protein

2019 ◽  
pp. 1-8
Author(s):  
Jitesh Kumar ◽  
Tushar Ranjan ◽  
Ravi Ranjan Kumar ◽  
Mohammad Ansar ◽  
Kumari Rajani ◽  
...  
Keyword(s):  
Coat Protein ◽  
Potato Virus ◽  
Homology Modelling ◽  
Leaf Roll ◽  
Potato Leaf Roll Virus ◽  
Z Score ◽  
Ramachandran Plot ◽  
Potato Leaf ◽  
Potato Virus S ◽  
Potato Crops

Polerovirus (Family-Luteoviridae) are one of the most destructive viruses causing detrimental diseases in vegetable crops in tropical regions of the world including India. Four species viz. potato leaf roll virus (PLRV), potato virus Y(PVY), potato virus X(PVX) and potato virus S(PVS) are known to cause different diseases in potato crops. Of the various viral diseases inflicting potato crops, potato leaf roll disease is the most destructive and widely distributed. They cause huge agro-economical losses (90%) worldwide and thus are the subjects of immense concern. PLRV is a phloem-limited spherical virus transmitted by several aphid species in a persistent manner. A study was performed in order to detect the infection of potato leaf roll virus from different regions of Bihar. These infected samples were diagnosed first using DAS-ELISA for the PLRV infection and later, coat protein was amplified and sequenced from PLRV positive sample. Phylogenetic tree deduced based on the nucleotide sequence of the coat protein gene gene showed a distinct divergence of PLRV isolates in two major clades. The molecular weight of the predicted protein sequence of 203 amino acids was found 22617.06 daltons while theoretical pI was 5.22. The extinction coefficient of predicted coat protein was 0.836. An attempt was taken in order to illustrate the 3D model of the coat protein which was further verified using Ramachandran plot. The model structure obtained using Swiss-Model had 92.9% residues in the most favourable region of the Ramachandran plot (Fig. 3c) and showed Z-score for bond angles, chi-1/chi-2 correlation and Ramachandran Z-score were 1.457, 1.773 and -2.633 respectively which exhibited  considerably good model quality.

Sign in / Sign up

Export Citation Format

Share Document