scholarly journals Characterization of Normal and Malignant Breast Tissues utilizing Hyperspectral Images and Associated Differential Spectrum Algorithm

2021 ◽  
Vol 7 (2) ◽  
pp. 020302
Author(s):  
Mohamed Aref ◽  
Abou-Bakr Youssef ◽  
Ibrahim El-Sharkawy

Breast malignancy is the most pervasive disease and a significant reason for death in women around the world. Recently, Photonic technologies play a vital role in medical applications. This study presents an outline of recent outcomes on the magnitude of breast tissue optical properties. We established an optical system setup utilizing a hyperspectral (HS) camera with poly-chromatic source lights with wavelength (380~1050 nm) for this investigation. Measuring the diffuse reflection (Ŗd) of the investigated ex vivo breast sample to select the optimum spectral image to differentiate between the normal and tumor in the near infra-red and visible (NIR–VIS) spectrum. Finally, applying the custom algorithm to increase the image contrast and applying contour delineation of the malignant regions. The experimental analysis indicates key spectroscopic variations between normal tissue and malignant region in range (550~650 nm). Although, after data normalization, there was noticeable variation at three ranges (630–680 nm), (720–770 nm), and (830–880 nm). The calculated standard deviation (Şd) between the normal and cancer tissue to validate the selective ranges shows that the highest contrast at wavelength 680 nm. However, the histogram analysis illustrates that the spectral image at 600 nm was higher contrast and wavelength 400 nm was the lowest contrast from the select seven-spectral images (400, 500, 600, 700, 800, 900, 1000 nm) to avoid the processing time of the captured HS 128-frames. The proposed potential method could provide promising results on the investigated breast sample optical properties in the diagnostic applications to assist the pathologist and the surgeon. Where the optimum wavelength at 680 nm for diagnostic applications and the ideal spectral image at 600 nm discriminate between the normal and malignant tissue.

2009 ◽  
Vol 02 (02) ◽  
pp. 123-129 ◽  
Author(s):  
STEVEN L. JACQUES

An introduction to the basics of spectral imaging as applied to biological tissues is presented. An example of a spectral image of a face is used to demonstrate the data and spectral analysis that specify the melanin content (M), blood content (B), tissue oxygen saturation (S), water content (W), fraction of scattering due to Rayleigh scattering (f) and due to Mie scattering (1 - f), and the reduced scattering coefficient at 500-nm wavelength (μ′s 500 nm). The sensitivity of reflectance spectra to variation in the various parameters is illustrated.


2017 ◽  
Vol 49 (7) ◽  
pp. 666-674 ◽  
Author(s):  
Paul J.D. Whiteside ◽  
Chenxi Qian ◽  
Nicholas Golda ◽  
Heather K. Hunt

2020 ◽  
pp. 189-201
Author(s):  
Mohamed Aref ◽  
Ibrahim H. Aboughaleb ◽  
Abou-Bakr Youssef ◽  
Yasser El-Sharkawy

Background: Breast malignant growth is the most widely recognized disease in women in both highly and less developed nations where early detection is vital for life-saving and fast recovery. Recently, Photonic technologies has played a vital role in medical applications. Their satisfactory and viable implementation in therapy and diagnosis requires reliable information on the optical properties of human tissues. This study presents an outline of recent outcomes on the magnitude of breast tissue optical properties.Methods: We established two different system setups utilizing hyperspectral (HS) camera and multiple excitation source lights with wavelength (380~1050 nm) for this investigation. The first setup (Transmission Mode) was applied for light transmission measurement of ex-vivo breast sample. Thereby, we made calculations of sample absorption. The second setup (Reflection Mode) was used for the measurement of breast sample light diffuse reflectance. The outcomes of both setups were used to select the optimum spectral image to differentiate between the normal and tumoral regions in the ex-vivo breast sample by exploring the optical properties spectroscopy in the Near and visible (NIR-VIS) spectrum. Finally, we applied the custom system on the case study technique for breast tumor detection.Results: Experimental investigations results showed that due to the various excitation wavelength light source (380~1050 nm) generates variable depths of penetration depth in the ex-vivo breast sample. Consequently, experimental results of the diffuse reflectance (?d) provide the optimum spectral image at 600 nm for the diagnostic applications. However, the statistical calculation of the normalized signal validated the outcome at wavelength 680 nm. Additionally, we noticed the optimum spectral image for therapy applications at 700 nm by measurement of breast tissue transmission (?) and attenuation absorption (?) calculation. Moreover, the statistical calculation of the normalized signal validated the outcome at wavelength 760 nm.Conclusions: The proposed novel approach successfully provided promising results of the investigated breast sample optical properties in both diagnostic and therapy applications to assist the pathologist and the surgeon. The trail outcomes of the investigated case study were impressive for selecting optimum wavelength for diagnostic and treatment (680, 760 nm), respectively.


2018 ◽  
Vol 35 (1) ◽  
pp. 176-182 ◽  
Author(s):  
Vivek K. Nagarajan ◽  
Venkateswara R. Gogineni ◽  
Sarah B. White ◽  
Bing Yu

2017 ◽  
Vol 11 (01) ◽  
pp. 1750011 ◽  
Author(s):  
Zhifang Li ◽  
Haiyu Chen ◽  
Feifan Zhou ◽  
Hui Li ◽  
Wei R. Chen

Interstitial laser immunotherapy (ILIT) is designed to use photothermal and immunological interactions for treatment of metastatic cancers. The photothermal effect is crucial in inducing anti-tumor immune responses in the host. Tissue temperature and tissue optical properties are important factors in this process. In this study, a device combining interstitial photoacoustic (PA) technique and interstitial laser photothermal interaction is proposed. Together with computational simulation, this device was designed to determine temperature distributions and tissue optical properties during laser treatment. Experiments were performed using ex-vivo porcine liver tissue. Our results demonstrated that interstitial PA signal amplitude was linearly dependent on tissue temperature in the temperature ranges of 20–60[Formula: see text]C, as well as 65–80[Formula: see text]C, with a different slope, due to the change of tissue optical properties. Using the directly measured temperature in the tissue around the interstitial optical fiber diffusion tip for calibration, the theoretical temperature distribution predicted by the bioheat equation was used to extract optical properties of tissue. Finally, the three-dimensional temperature distribution was simulated to guide tumor destruction and immunological stimulation. Thus, this novel device and method could be used for monitoring and controlling ILIT for cancer treatment.


Microbiome ◽  
2021 ◽  
Vol 9 (1) ◽  
Author(s):  
Leeann Klassen ◽  
Greta Reintjes ◽  
Jeffrey P. Tingley ◽  
Darryl R. Jones ◽  
Jan-Hendrik Hehemann ◽  
...  

AbstractGut microbiomes, such as the microbial community that colonizes the rumen, have vast catabolic potential and play a vital role in host health and nutrition. By expanding our understanding of metabolic pathways in these ecosystems, we will garner foundational information for manipulating microbiome structure and function to influence host physiology. Currently, our knowledge of metabolic pathways relies heavily on inferences derived from metagenomics or culturing bacteria in vitro. However, novel approaches targeting specific cell physiologies can illuminate the functional potential encoded within microbial (meta)genomes to provide accurate assessments of metabolic abilities. Using fluorescently labeled polysaccharides, we visualized carbohydrate metabolism performed by single bacterial cells in a complex rumen sample, enabling a rapid assessment of their metabolic phenotype. Specifically, we identified bovine-adapted strains of Bacteroides thetaiotaomicron that metabolized yeast mannan in the rumen microbiome ex vivo and discerned the mechanistic differences between two distinct carbohydrate foraging behaviors, referred to as “medium grower” and “high grower.” Using comparative whole-genome sequencing, RNA-seq, and carbohydrate-active enzyme fingerprinting, we could elucidate the strain-level variability in carbohydrate utilization systems of the two foraging behaviors to help predict individual strategies of nutrient acquisition. Here, we present a multi-faceted study using complimentary next-generation physiology and “omics” approaches to characterize microbial adaptation to a prebiotic in the rumen ecosystem.


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