scholarly journals Assessment of sample processing methods for stable isotope analysis of aquatic food webs

2008 ◽  
Vol 20 (1) ◽  
pp. 13-20
Author(s):  
ZENG Qingfei ◽  
◽  
KONG Fanxiang ◽  
ZHANG Enlou ◽  
QIAN Shanqin
2020 ◽  
Author(s):  
Marc Jürgen Silberberger ◽  
Katarzyna Koziorowska-Makuch ◽  
Karol Kuliński ◽  
Monika Kędra

Abstract. Stable isotope analysis has become one of the most widely used techniques in ecology. However, uncertainties about the effects of sample preservation and pre-treatment on the ecological interpretation of stable isotope data and especially on Bayesian stable isotope mixing models remain. Here, Bayesian mixing models were used to study how three different preservation methods (drying, freezing, formalin) and two pre-treatments (acidification, lipid removal) affect the estimation of diet composition for two benthic invertebrate species (Limecola balthica, Crangon crangon). Furthermore, commonly used mathematical lipid normalization and formalin correction were applied to check if they improve the model results. Preservation effects were strong on model outcomes for frozen as well as formalin preserved L. balthica samples, but not for C. crangon. Pre-treatment effects varied with species and preservation method and neither lipid normalization nor mathematical formalin correction consistently resulted in improved model outcomes. Our analysis highlights that particularly small changes in δ15N introduced by different preservation and pre-treatments display a so far unrecognized source of error in stable isotope studies. We conclude that mathematical correction of stable isotopes data should be avoided for Bayesian mixing models and that previously unaddressed effects of sample preservation (especially those arising from preservation by freezing) have potentially biased our understanding of the utilization of organic matter in aquatic food webs.


Author(s):  
Brandon D Hoenig ◽  
Allison M Snider ◽  
Anna M Forsman ◽  
Keith A Hobson ◽  
Steven C Latta ◽  
...  

Abstract Identifying the composition of avian diets is a critical step in characterizing the roles of birds within ecosystems. However, because birds are a diverse taxonomic group with equally diverse dietary habits, gaining an accurate and thorough understanding of avian diet can be difficult. In addition to overcoming the inherent difficulties of studying birds, the field is advancing rapidly, and researchers are challenged with a myriad of methods to study avian diet, a task that has only become more difficult with the introduction of laboratory techniques to dietary studies. Because methodology drives inference, it is important that researchers are aware of the capabilities and limitations of each method to ensure the results of their study are interpreted correctly. However, few reviews exist which detail each of the traditional and laboratory techniques used in dietary studies, with even fewer framing these methods through a bird-specific lens. Here, we discuss the strengths and limitations of morphological prey identification, DNA-based techniques, stable isotope analysis, and the tracing of dietary biomolecules throughout food webs. We identify areas of improvement for each method, provide instances in which the combination of techniques can yield the most comprehensive findings, introduce potential avenues for combining results from each technique within a unified framework, and present recommendations for the future focus of avian dietary research.


Author(s):  
István Tátrai ◽  
Kálmán Mátyás ◽  
János Korponai ◽  
Gábor Paulovits ◽  
Piroska Pomogyi ◽  
...  

PLoS ONE ◽  
2018 ◽  
Vol 13 (2) ◽  
pp. e0191335 ◽  
Author(s):  
Charlotte R. Dromard ◽  
Yolande Bouchon-Navaro ◽  
Sébastien Cordonnier ◽  
Mathilde Guéné ◽  
Mireille Harmelin-Vivien ◽  
...  

2006 ◽  
Vol 336 (2) ◽  
pp. 254-261 ◽  
Author(s):  
Sirka Carabel ◽  
Enrique Godínez-Domínguez ◽  
Patricia Verísimo ◽  
Luís Fernández ◽  
Juan Freire

2015 ◽  
Vol 154 ◽  
pp. 158-168 ◽  
Author(s):  
Giulio Careddu ◽  
Maria Letizia Costantini ◽  
Edoardo Calizza ◽  
Pasquale Carlino ◽  
Flavia Bentivoglio ◽  
...  

2018 ◽  
Vol 66 (4) ◽  
pp. 261 ◽  
Author(s):  
J. F. Ocock ◽  
K. J. Brandis ◽  
B. J. Wolfenden ◽  
K. M. Jenkins ◽  
S. Wassens

Larval amphibians (tadpoles) are an important link in aquatic food webs, as they can be highly abundant consumers and prey for a wide variety of predators. Most tadpoles are considered omnivores, predominately grazing on algae, detritus and macrophytes, though recent work has identified greater plasticity and breadth in diet than previously considered. We used gut content and stable isotope analysis (SIA) in a baseline study to determine the important dietary items (ingested material) and food sources (assimilated material) for tadpoles of two abundant generalist frog species in regulated floodplain wetlands of the Murrumbidgee River, south-east Australia. We identified a wide variety of dietary items in the gut contents, including whole microcrustaceans, filamentous algae and macrophytes. The composition of several ingested food items was correlated with their availability in each wetland. However, SIA identified biofilm as the food source most consistently assimilated across several wetlands, though microcrustaceans and algae contributed when abundant. Biofilm is likely the most important basal food item for tadpoles in floodplain wetlands because it is ubiquitous and has a high nutritional quality. Identifying important food sources is a crucial step towards developing management strategies for promoting tadpole recruitment in regulated wetlands.


Hydrobiologia ◽  
2016 ◽  
Vol 784 (1) ◽  
pp. 111-123 ◽  
Author(s):  
Carlos Iglesias ◽  
Mariana Meerhoff ◽  
Liselotte S. Johansson ◽  
Ivan González-Bergonzoni ◽  
Néstor Mazzeo ◽  
...  

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