scholarly journals COMPARISON OF FUZZY SUBTRACTIVE CLUSTERING AND FUZZYC-MEANS

Kursor ◽  
2021 ◽  
Vol 11 (1) ◽  
Author(s):  
Annisa Eka Haryati ◽  
Sugiyarto Sugiyarto ◽  
Rizki Desi Arindra Putri
Keyword(s):  
Principal Component Analysis ◽  
Fuzzy Clustering ◽  
Principal Component ◽  
Large Data ◽  
Component Analysis ◽  
Subtractive Clustering ◽  
Validity Index ◽  
Fuzzy Clustering Method ◽  
Dependent Variables ◽  
Better Than

Multivariate statistics have related problems with large data dimensions. One method that can be used is principal component analysis (PCA). Principal component analysis (PCA) is a technique used to reduce data dimensions consisting of several dependent variables while maintaining variance in the data. PCA can be used to stabilize measurements in statistical analysis, one of which is cluster analysis. Fuzzy clustering is a method of grouping based on membership values ​​that includes fuzzy sets as a weighting basis for grouping. In this study, the fuzzy clustering method used is Fuzzy Subtractive Clustering (FSC) and Fuzzy C-Means (FCM) with a combination of the Minkowski Chebysev distance. The purpose of this study was to compare the cluster results obtained from the FSC and FCM using the DBI validity index. The results obtained indicate that the results of clustering using FCM are better than the FSC.

Gender classification based on fuzzy clustering and principal component analysis

2016 ◽  
Vol 10 (3) ◽  
pp. 228-233 ◽  
Author(s):  
Hamid Hassanpour ◽  
Amin Zehtabian ◽  
Avishan Nazari ◽  
Hossein Dehghan
Keyword(s):  
Principal Component Analysis ◽  
Fuzzy Clustering ◽  
Principal Component ◽  
Component Analysis ◽  
Gender Classification

scholarly journals Functional Connectivity: The Principal-Component Analysis of Large (PET) Data Sets

1993 ◽  
Vol 13 (1) ◽  
pp. 5-14 ◽  
Author(s):  
K. J. Friston ◽  
C. D. Frith ◽  
P. F. Liddle ◽  
R. S. J. Frackowiak
Keyword(s):  
Principal Component Analysis ◽  
Functional Connectivity ◽  
Verbal Fluency ◽  
Principal Component ◽  
Temporal Correlation ◽  
Large Data ◽  
Component Analysis ◽  
Anterior Cingulate ◽  
Data Sets ◽  
Brain System

The distributed brain systems associated with performance of a verbal fluency task were identified in a nondirected correlational analysis of neurophysiological data obtained with positron tomography. This analysis used a recursive principal-component analysis developed specifically for large data sets. This analysis is interpreted in terms of functional connectivity, defined as the temporal correlation of a neurophysiological index measured in different brain areas. The results suggest that the variance in neurophysiological measurements, introduced experimentally, was accounted for by two independent principal components. The first, and considerably larger, highlighted an intentional brain system seen in previous studies of verbal fluency. The second identified a distributed brain system including the anterior cingulate and Wernicke's area that reflected monotonic time effects. We propose that this system has an attentional bias.

Training Data Reduction and Classification Based on Greedy Kernel Principal Component Analysis and Fuzzy C-Means Algorithm

2013 ◽  
Vol 347-350 ◽  
pp. 2390-2394
Author(s):  
Xiao Fang Liu ◽  
Chun Yang
Keyword(s):  
Principal Component Analysis ◽  
Feature Extraction ◽  
Computational Complexity ◽  
Principal Component ◽  
Large Data ◽  
Component Analysis ◽  
Training Data ◽  
Kernel Principal Component Analysis ◽  
Nonlinear Feature Extraction ◽  
Nonlinear Feature

Nonlinear feature extraction used standard Kernel Principal Component Analysis (KPCA) method has large memories and high computational complexity in large datasets. A Greedy Kernel Principal Component Analysis (GKPCA) method is applied to reduce training data and deal with the nonlinear feature extraction problem for training data of large data in classification. First, a subset, which approximates to the original training data, is selected from the full training data using the greedy technique of the GKPCA method. Then, the feature extraction model is trained by the subset instead of the full training data. Finally, FCM algorithm classifies feature extraction data of the GKPCA, KPCA and PCA methods, respectively. The simulation results indicate that the feature extraction performance of both the GKPCA, and KPCA methods outperform the PCA method. In addition of retaining the performance of the KPCA method, the GKPCA method reduces computational complexity due to the reduced training set in classification.

scholarly journals Analysis of 46,046 SARS-CoV-2 whole-genomes leveraging principal component analysis (PCA)

2020 ◽  
Author(s):  
Christiane Scherer ◽  
James Grover ◽  
Darby Kammeraad ◽  
Gabe Rudy ◽  
Andreas Scherer
Keyword(s):  
Principal Component Analysis ◽  
Population Genetics ◽  
Phylogenetic Analysis ◽  
Principal Component ◽  
Large Data ◽  
Component Analysis ◽  
Comprehensive Analysis ◽  
Large Data Sets ◽  
Data Sets ◽  
Whole Genomes

AbstractSince the beginning of the global SARS-CoV-2 pandemic, there have been a number of efforts to understand the mutations and clusters of genetic lines of the SARS-CoV-2 virus. Until now, phylogenetic analysis methods have been used for this purpose. Here we show that Principal Component Analysis (PCA), which is widely used in population genetics, can not only help us to understand existing findings about the mutation processes of the virus, but can also provide even deeper insights into these processes while being less sensitive to sequencing gaps. Here we describe a comprehensive analysis of a 46,046 SARS-CoV-2 genome sequence dataset downloaded from the GISAID database in June of this year.SummaryPCA provides deep insights into the analysis of large data sets of SARS-CoV-2 genomes, revealing virus lineages that have thus far been unnoticed.

Quantitative measurement of complex substances dissolved in an ionic liquid using IR spectroscopy and chemometrics

2017 ◽  
Vol 84 (1) ◽  
Author(s):  
Johannes Kiefer ◽  
Andreas Bösmann ◽  
Peter Wasserscheid
Keyword(s):  
Principal Component Analysis ◽  
Ionic Liquid ◽  
Principal Component Regression ◽  
Principal Component ◽  
Component Analysis ◽  
Least Squares Regression ◽  
Catalytically Active ◽  
Regression Techniques ◽  
Active Substances ◽  
Better Than

AbstractIn the past two decades, ionic liquids have found many applications as solvents for complex solutes. Prominent examples are the dissolution of biomass and carbohydrates as well as catalytically active substances. The chemical analysis of such solutions, however, is still a challenge due to the molecular complexity. In the present work, the use of infrared spectroscopy for quantifying the concentration of different solutes dissolved in an imidazolium-based ionic liquid is investigated. Binary solutions of glucose, cellubiose, and Wilkinson's catalyst in 1-ethyl-3-methylimidazolium acetate are studied as examples. For this purpose, different chemometric approaches (principal component analysis (PCA), partial least-squares regression (PLSR), and principal component regression (PCR)) for analyzing the spectra are tested. Principal component analysis was found to be suitable for classifying the different solutions. Both regression techniques were capable of deriving accurate concentration values. The performance of PLSR was slightly better than that of PCR for the same number of components.

Sign in / Sign up

Export Citation Format

Share Document