Integrative Analysis of Genome-wide Gene Expression for Prostate Cancer Prognosis

2011 ◽  
Author(s):  
Jiyoung Ahn
Author(s):  
Dilys Lam ◽  
Susan Clark ◽  
Clare Stirzaker ◽  
Ruth Pidsley

There is a major clinical need for accurate biomarkers for prostate cancer prognosis, to better inform treatment strategies and disease monitoring. Current clinically recognised prognostic factors, including prostate-specific antigen (PSA) levels, lack sensitivity and specificity in distinguishing aggressive from indolent disease, particularly in patients with localised intermediate grade prostate cancer. There has therefore been a major focus on identifying molecular biomarkers that can add prognostic value to existing markers, including investigation of DNA methylation, which has a known role in tumorigenesis. In this review, we will provide a comprehensive overview of the current state of DNA methylation biomarker studies in prostate cancer prognosis, and highlight the advances that have been made in this field. We cover the numerous studies into well-established candidate genes, and explore the technological transition that has enabled hypothesis-free genome-wide studies and the subsequent discovery of novel prognostic genes.


Cancers ◽  
2020 ◽  
Vol 12 (10) ◽  
pp. 2993 ◽  
Author(s):  
Dilys Lam ◽  
Susan Clark ◽  
Clare Stirzaker ◽  
Ruth Pidsley

There is a major clinical need for accurate biomarkers for prostate cancer prognosis, to better inform treatment strategies and disease monitoring. Current clinically recognised prognostic factors, including prostate-specific antigen (PSA) levels, lack sensitivity and specificity in distinguishing aggressive from indolent disease, particularly in patients with localised intermediate grade prostate cancer. There has therefore been a major focus on identifying molecular biomarkers that can add prognostic value to existing markers, including investigation of DNA methylation, which has a known role in tumorigenesis. In this review, we will provide a comprehensive overview of the current state of DNA methylation biomarker studies in prostate cancer prognosis, and highlight the advances that have been made in this field. We cover the numerous studies into well-established candidate genes, and explore the technological transition that has enabled hypothesis-free genome-wide studies and the subsequent discovery of novel prognostic genes.


2019 ◽  
Author(s):  
Jordan H. Creed ◽  
Anders E. Berglund ◽  
Robert J. Rounbehler ◽  
Shivanshu Awasthi ◽  
John L. Cleveland ◽  
...  

2019 ◽  
Author(s):  
Jordan H. Creed ◽  
Anders E. Berglund ◽  
Robert J. Rounbehler ◽  
Shivanshu Awasthi ◽  
John L. Cleveland ◽  
...  

2019 ◽  
Vol 29 (1) ◽  
pp. 246-253 ◽  
Author(s):  
Jordan H. Creed ◽  
Anders E. Berglund ◽  
Robert J. Rounbehler ◽  
Shivanshu Awasthi ◽  
John L. Cleveland ◽  
...  

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