scholarly journals Genetic Gains in Grain Yield Through Genomic Selection in Eight Bi-parental Maize Populations under Drought Stress

Crop Science ◽  
2015 ◽  
Vol 55 (1) ◽  
pp. 154-163 ◽  
Author(s):  
Yoseph Beyene ◽  
Kassa Semagn ◽  
Stephen Mugo ◽  
Amsal Tarekegne ◽  
Raman Babu ◽  
...  
Keyword(s):  
Drought Stress ◽  
Grain Yield ◽  
Genomic Selection ◽  
Genetic Gains ◽  
Maize Populations

scholarly journals Rapid Cycling Genomic Selection in a Multiparental Tropical Maize Population

2017 ◽  
Vol 7 (7) ◽  
pp. 2315-2326 ◽  
Author(s):  
Xuecai Zhang ◽  
Paulino Pérez-Rodríguez ◽  
Juan Burgueño ◽  
Michael Olsen ◽  
Edward Buckler ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Grain Yield ◽  
Genomic Selection ◽  
Breeding Period ◽  
Rapid Cycling ◽  
Tropical Maize ◽  
Training Population ◽  
Genetic Gains ◽  
Maize Population ◽  
Short Period

Abstract Genomic selection (GS) increases genetic gain by reducing the length of the selection cycle, as has been exemplified in maize using rapid cycling recombination of biparental populations. However, no results of GS applied to maize multi-parental populations have been reported so far. This study is the first to show realized genetic gains of rapid cycling genomic selection (RCGS) for four recombination cycles in a multi-parental tropical maize population. Eighteen elite tropical maize lines were intercrossed twice, and self-pollinated once, to form the cycle 0 (C0) training population. A total of 1000 ear-to-row C0 families was genotyped with 955,690 genotyping-by-sequencing SNP markers; their testcrosses were phenotyped at four optimal locations in Mexico to form the training population. Individuals from families with the best plant types, maturity, and grain yield were selected and intermated to form RCGS cycle 1 (C1). Predictions of the genotyped individuals forming cycle C1 were made, and the best predicted grain yielders were selected as parents of C2; this was repeated for more cycles (C2, C3, and C4), thereby achieving two cycles per year. Multi-environment trials of individuals from populations C0, C1, C2, C3, and C4, together with four benchmark checks were evaluated at two locations in Mexico. Results indicated that realized grain yield from C1 to C4 reached 0.225 ton ha−1 per cycle, which is equivalent to 0.100 ton ha−1 yr−1 over a 4.5-yr breeding period from the initial cross to the last cycle. Compared with the original 18 parents used to form cycle 0 (C0), genetic diversity narrowed only slightly during the last GS cycles (C3 and C4). Results indicate that, in tropical maize multi-parental breeding populations, RCGS can be an effective breeding strategy for simultaneously conserving genetic diversity and achieving high genetic gains in a short period of time.

Photosynthetic organs contributions to grain yield genetic gains in Chilean winter wheat

2021 ◽  
Author(s):  
Abdelhalim Elazab ◽  
Felipe Moraga ◽  
Alejandro del Pozo
Keyword(s):  
Winter Wheat ◽  
Grain Yield ◽  
Genetic Gains

scholarly journals Copper Nanoparticle Application Enhances Plant Growth and Grain Yield in Maize Under Drought Stress Conditions

2021 ◽  
Author(s):  
Dong Van Nguyen ◽  
Huong Mai Nguyen ◽  
Nga Thanh Le ◽  
Kien Huu Nguyen ◽  
Hoa Thi Nguyen ◽  
...  
Keyword(s):  
Drought Stress ◽  
Plant Growth ◽  
Grain Yield ◽  
Stress Conditions ◽  
Copper Nanoparticle

Genetic Dissection of Epistatic Interactions Contributing Grain Yield Variability in Rice under Drought

2021 ◽  
Vol 22 ◽  
Author(s):  
Ratna Rani Majumder ◽  
Nitika Sandhu ◽  
Shailesh Yadav ◽  
Margaret Catolos ◽  
Ma. Teresa Sta. Cruz ◽  
...  
Keyword(s):  
Drought Stress ◽  
Grain Yield ◽  
Genetic Background ◽  
Reproductive Stage ◽  
Yield Variability ◽  
Marker Interval ◽  
Negative Interaction ◽  
Epistatic Interactions ◽  
Lattice Design ◽  
Drought Tolerant

Aims: The aim of the present study was to evaluate the performance of ‘high’-‘low’ yielding pyramided lines (PLs) with the same combinations of qDTYs in Samba Mahsuri, MR219 and IR64-Sub1 genetic backgrounds and understand the genetic interactions of QTL and with genetic background affecting grain yield. Background: Epistasis regulates the expression of traits governed by several major/minor genes/QTL. Multiple pyramided lines (PLs) with the same grain yield QTL (qDTYs) combinations but possessing grain yield variability under different levels of reproductive stage drought stress were identified in different rice genetic backgrounds at International Rice Research Institute (IRRI). Objectives: The objectives of the present study were to evaluate the performance pyramided lines (PLs) with drought QTL in the backgrounds of Samba Mahsuri, MR219 and IR64-Sub1 under reproductive stage drought stress (RS) and NS (non-stress) conditions ii) to understand the effect of epistatic interactions of qDTYs and with genetic background on GY under the differential level of stress iii) to identify the promising drought-tolerant lines with high yield under drought and higher background recovery in different genetic backgrounds. Results: Several digenic interactions were found in different genetic backgrounds, 13 interactions in Samba Mahsuri, 11 in MR219 and 20 in IR64-Sub1 backgrounds. Among all digenic interactions, one QTL × QTL interaction, 17 QTL × background and 26 background × background interactions resulted in GY reduction in low yielding PLs in different genetic backgrounds under LSS or LMS. Negative interaction of qDTY3.1, qDTY4.1 and qDTY9.1 with background markers and background × background interactions caused up to 15% GY reduction compared to the high yielding PLs under LMS in the Samba Mahsuri PLs. In MR219 PLs, the negative interaction of qDTY2.2, qDTY3.2, qDTY4.1 and qDTY12.1 with the background marker interval RM314-RM539, RM273-RM349 and RM445-RM346, RM473D-RM16, respectively resulted in 52% GY reduction compared to the high yielding PLs under LSS. In IR64-Sub1 PLs, qDTY6.1 interacted with background loci at RM16-RM135, RM228-RM333, RM202-RM287 and RM415-RM558A marker interval under LSS; and at RM475-RM525 marker interval under LMS, causing GY reduction to 58% compared to the high yielding PLs. Conclusion: High yielding PLs in Samba Mahsuri (IR 99734:1-33-69-1-22-6), MR219 (IR 99784-156-87-2-4-1) and IR64-Sub1 (IR 102784:2-89-632-2-1-2) backgrounds without any negative interactions were identified. The identified selected promising PLs may be used as potential drought-tolerant donors or may be released as varieties for drought-prone ecosystems in different countries. Methods: The experiments were conducted in 2015DS (dry season), 2015WS (wet season) and 2017 DS at IRRI, Los Baños, Philippines, in a transplanted lowland ecosystem under lowland severe stress (LSS), moderate lowland stress (LMS) and lowland non-stress (LNS). The experiments were laid out in alpha lattice design with two replications.

Predicted strong genetic gains from the application of genomic selection to improve growth related traits in barramundi (Lates calcarifer)

Aquaculture ◽  
2021 ◽  
pp. 737761
Author(s):  
DeanR. Jerry ◽  
David B. Jones ◽  
Marie Lillehammer ◽  
Cecile Massault ◽  
Shannon Loughnan ◽  
...  
Keyword(s):  
Genomic Selection ◽  
Lates Calcarifer ◽  
Genetic Gains

scholarly journals Strategies to assure optimal trade-offs among competing objectives for genetic improvement of soybean

2021 ◽  
Author(s):  
Vishnu Ramasubramanian ◽  
William Beavis
Keyword(s):  
Genomic Selection ◽  
Genetic Improvement ◽  
Genetic Variance ◽  
Breeding Strategies ◽  
Short Term ◽  
Genetic Gains ◽  
Mating Design ◽  
Genetic Potential ◽  
Breeding Populations

AbstractPlant breeding is a decision making discipline based on understanding project objectives. Genetic improvement projects can have two competing objectives: maximize rate of genetic improvement and minimize loss of useful genetic variance. For commercial plant breeders competition in the marketplace forces greater emphasis on maximizing immediate genetic improvements. In contrast public plant breeders have an opportunity, perhaps an obligation, to place greater emphasis on minimizing loss of useful genetic variance while realizing genetic improvements. Considerable research indicates that short term genetic gains from Genomic Selection (GS) are much greater than Phenotypic Selection (PS), while PS provides better long term genetic gains because PS retains useful genetic diversity during the early cycles of selection. With limited resources must a soybean breeder choose between the two extreme responses provided by GS or PS? Or is it possible to develop novel breeding strategies that will provide a desirable compromise between the competing objectives? To address these questions, we decomposed breeding strategies into decisions about selection methods, mating designs and whether the breeding population should be organized as family islands. For breeding populations organized into islands decisions about possible migration rules among family islands were included. From among 60 possible strategies, genetic improvement is maximized for the first five to ten cycles using GS, a hub network mating design in breeding populations organized as fully connected family islands and migration rules allowing exchange of two lines among islands every other cycle of selection. If the objectives are to maximize both short-term and long-term gains, then the best compromise strategy is similar except a genomic mating design, instead of a hub networked mating design, is used. This strategy also resulted in realizing the greatest proportion of genetic potential of the founder populations. Weighted genomic selection applied to both non-isolated and island populations also resulted in realization of the greatest proportion of genetic potential of the founders, but required more cycles than the best compromise strategy.

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