Evaluation of resistant genotypes and their characterization using molecular markers linked for powdery mildew resistance in cucumber (Cucumis sativus L.)

Powdery mildew (PM) is one of the most severe fungal diseases of cucumber that limits its production worldwide. In this study, 140 genotypes of cucumber were screened for disease resistance under field and artificial conditions, and then validated with eight known SSR markers linked to PM resistance. Among these genotypes, genotype GS140 was found resistant (R), whereas GS148, GS16 and GS70 were moderately resistant, and GS169 was found to be tolerant. Of all the eight markers, only C31, C80, C162, SSR16472 and SSR16881 amplified the reported linked allele. The 127 bp allele of SSR16881 was found to be associated with the lowest disease severity of 37.65%. The associated markers could further be verified for their usability using linkage studies and the contrast genotypes in the present study could serve as a tool for selection in future marker-assisted selection breeding strategies for PM resistance.

Interaction between the body condition score, gait, hindlimb conformation, and claw conformation in dairy cows in Aydin, Turkey

ABSTRACT: Breeding strategies aim to reduce lameness in dairies by using predictor traits to increase the selection of dairy cows. This study enhanced the present knowledge about association between the claw conformations (CC), hindlimb conformation (HiLC), gait, and body condition score (BCS) in dairy cows. A total of 166 lactating Holstein cows were enrolled in the study and scored for BCS, CC, HiLC, and gait. The abnormal HiLC group was statistically significant (P<0.001) to have more abnormal CC. Hock in (Hin) cows showed significance (P<0.001) with CC abnormalities. Cows with abnormal gait have less abnormal claw and limb conformation than normal cows (P=0.032). Lactation number (P=0.036) and abnormal HiLC (P<0.001) were significantly increased risk for CC. The present results might be useful for claw and hindlimb conformations, and breeding strategies of the herd.

Designing Climate-Smart Brinjal That Can Withstand a Variety of Environmental Conditions: A Perspective

Brinjal is a beautiful vegetable crop with strong nutritional properties specifically folate concentration and total chlorogenic acid content. These vitamins and minerals are very much effective in building up the immune system, whilst chlorogenic acid content protects the human body against heart illnesses, liver issues and diabetes. The quantity of these chemicals changes from cultivar to cultivar largely based upon the location of growth and changing environmental circumstances. Many plant breeding strategies are used to alleviate the losses but have proved to be less successful. Whereas the use of molecular markers and other biotechnology technologies have created a road for creating climate smart brinjal with maximum yields and nutritious contents.

Prioritization of vigor QTL-associated genes for future genome-directed Vitis breeding

Vigor control in grapevine may become especially important under climate change. A better understanding of gene-phenotype relationships is required in order to exploit plant genomics for breeding purposes. This research aims to use quantitative trait loci (QTLs) for vigor identified in the progeny from a cross of Ramsey (Vitis champinii) × Riparia Gloire (V. riparia). Genes located 700 kb up and downstream from each QTL position were interrogated for functional enrichment through ShinyGO online tool, based on the gene ontology annotation of Vitis vinifera PN40024. Key biological processes like phloem and xylem development, cell cycle, response to hormones, amino acid transport, tissue development, sugar metabolism, nitrogen transport, and stress/immune responses, showed functional enrichment. Integral response to light and auxin might be required for fine molecular tuning of vegetative growth in Vitis. Fifty out of 1318 candidate genes were prioritized, reducing their amount to a manageable number of candidates for further directed breeding strategies. Highlights Plant vigor control may become especially important under climate change. Genes from various vigor-related QTLs were interrogated for functional enrichment. The analysis reduced candidate gene number based on marker proximity and functional enrichment, constituting a suitable shortcut for target-directed genome-guided breeding strategies. Three TFs are strong candidates for targeted breeding: TIF - HY5, TIF - SUS1, TIF - VOZ1 potentially enhance growth by relating light response to hormone activation, and then to photosynthesis and morphogenesis.

Disentangling potential genotypes for macro and micro nutrients and polymorphic markers in Chickpea

Background- The present investigation was conducted to assess the nutritional diverseness and identify novel genetic resources to be utilized in chickpea breeding for macro and micro nutrients. Methods-The plants were grown in randomized block design. Nutritional and phytochemical properties of nine chickpea genotypes were estimated. The EST sequences from NCBI database were downloaded in FASTA format, clustered into contigs using CAP3, mined for novel SSRs using TROLL analysis and primer pairs were designed using Primer 3 software. Jaccard’s similarity coefficients were used to compare the nutritional and molecular indexes followed by dendrograms construction employing UPGMA approach. Results- The genotypes PUSA-1103, K-850, PUSA-1108, PUSA-1053 and the EST-SSR markers ICCeM012, ICCeM0049, ICCeM0070, ICCeM0078, SVP55, SVP95, SVP96, SVP146, SVP213 & SVP217 were found as potential donor / marker resources for the macro-micro nutrients. The genotypes differed (p<0.05) for nutritional properties. Amongst newly designed primers, 6 were found polymorphic with median PIC (0.46). The alleles per primer ranged 1 to 8. Cluster analysis based on nutritional and molecular diversities partially matched to each other in principle. Conclusion-The identified novel genetic resources may be used to widen the germplasm base, prepare maintainable catalogue and identify systematic blueprints for future chickpea breeding strategies targeting macro-micro nutrients.

Coordinated Effect of Ascorbate Biosynthesis and Recycling in Maize Seed Germination and Seedling Establishment under Low Temperature

The impacts of low temperature occasionally encountered at higher latitude regions on maize seed germination present significant threats to yield and cultivation. Exploring the association of antioxidant system with low temperature (LT) germination could support the breeding strategies for better responding to LT disturbance. In this study, we have examined the germination rate and growth potential of a set of elite maize inbred accessions under LT and normal temperature (NT) conditions in the field. These accessions were found to have variable germination rate and growth potential when grown at LT, whereas the difference is not significant under NT. Physiological study revealed lower hydrogen peroxide content in LT tolerant accessions when compared with sensitive ones. LT-tolerant and LT-sensitive lines maintained similar content of ascorbate (AsA) and glutathione (GSH), whereas the reduced substrate content of which were significantly higher in LT-tolerant accessions. Consistently, activities of ascorbate peroxidase and dehydroascorbate reductase, the enzyme components that responsible for the AsA-GSH recycling, were much higher in LT-tolerant lines. Transcription profile revealed the increased expression of ZmVTC2 gene in LT-tolerant inbred line, which was rate limited step in AsA biosynthesis. These data indicates that the coordinated improvement of AsA biosynthesis and AsA-GSH recycling increase the pool size of the total antioxidants, which ameliorate LT-induced oxidative stress during maize seed germination.