Advances in the Study of Mammalian Proteome by Tandem Affinity Purification – Mass Spectrometry

Delineating WWOX Protein Interactome by Tandem Affinity Purification-Mass Spectrometry: Identification of Top Interactors and Key Metabolic Pathways Involved

Frontiers in Oncology ◽

10.3389/fonc.2018.00591 ◽

2018 ◽

Vol 8 ◽

Cited By ~ 7

Author(s):

Tabish Hussain ◽

Jaeho Lee ◽

Martin C. Abba ◽

Junjie Chen ◽

C. Marcelo Aldaz

Keyword(s):

Mass Spectrometry ◽

Metabolic Pathways ◽

Affinity Purification ◽

Protein Interactome ◽

Mass Spectrometry Identification ◽

Identification of Protein Complexes from Tandem Affinity Purification/Mass Spectrometry Data via Biased Random Walk

IEEE/ACM Transactions on Computational Biology and Bioinformatics ◽

10.1109/tcbb.2014.2352616 ◽

2015 ◽

Vol 12 (2) ◽

pp. 455-466 ◽

Cited By ~ 3

Author(s):

Bingjing Cai ◽

Haiying Wang ◽

Huiru Zheng ◽

Hui Wang

Keyword(s):

Mass Spectrometry ◽

Random Walk ◽

Protein Complexes ◽

Affinity Purification ◽

Mass Spectrometry Data ◽

Biased Random Walk ◽

An Inducible Retroviral Expression System for Tandem Affinity Purification Mass-Spectrometry-Based Proteomics Identifies Mixed Lineage Kinase Domain-like Protein (MLKL) as an Heat Shock Protein 90 (HSP90) Client

Molecular & Cellular Proteomics ◽

10.1074/mcp.m115.055350 ◽

2016 ◽

Vol 15 (3) ◽

pp. 1139-1150 ◽

Cited By ~ 1

Author(s):

Johannes W. Bigenzahn ◽

Astrid Fauster ◽

Manuele Rebsamen ◽

Richard K. Kandasamy ◽

Stefania Scorzoni ◽

...

Keyword(s):

Mass Spectrometry ◽

Heat Shock ◽

Heat Shock Protein ◽

Affinity Purification ◽

Expression System ◽

Heat Shock Protein 90 ◽

Kinase Domain ◽

Mixed Lineage Kinase ◽

An Inducible Retroviral Expression System for Tandem Affinity Purification Mass-Spectrometry-Based Proteomics Identifies Mixed Lineage Kinase Domain-like Protein (MLKL) as an Heat Shock Protein 90 (HSP90) Client

Molecular & Cellular Proteomics ◽

10.1074/mcp.o115.055350 ◽

2015 ◽

Vol 15 (3) ◽

pp. 1139-1150 ◽

Cited By ~ 15

Author(s):

Johannes W. Bigenzahn ◽

Astrid Fauster ◽

Manuele Rebsamen ◽

Richard K. Kandasamy ◽

Stefania Scorzoni ◽

...

Keyword(s):

Mass Spectrometry ◽

Heat Shock ◽

Heat Shock Protein ◽

Affinity Purification ◽

Expression System ◽

Heat Shock Protein 90 ◽

Kinase Domain ◽

Mixed Lineage Kinase ◽

Analyzing protein complexes inDrosophila with tandem affinity purification-mass spectrometry

Developmental Dynamics ◽

10.1002/dvdy.20272 ◽

2005 ◽

Vol 232 (3) ◽

pp. 827-834 ◽

Cited By ~ 76

Author(s):

Alexey Veraksa ◽

Andreas Bauer ◽

Spyros Artavanis-Tsakonas

Keyword(s):

Mass Spectrometry ◽

Protein Complexes ◽

Affinity Purification ◽

Abstract P1-06-10: Combined tandem affinity purification mass-spectrometry technique with genome-editing CRISPR-Cas9 knockout screening to identify potential subunits in the BRCA1 complex

10.1158/1538-7445.sabcs18-p1-06-10 ◽

2019 ◽

Author(s):

H Zhao ◽

H Jiang ◽

W Sun ◽

Z Shao ◽

X Hu

Keyword(s):

Mass Spectrometry ◽

Genome Editing ◽

Affinity Purification ◽

Mass Spectrometry Technique ◽

Spectrometry Technique ◽

Faculty Opinions recommendation of Sortase A mediated site-specific immobilization for identification of protein interactions in affinity purification-mass spectrometry experiments.

Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature ◽

10.3410/f.725280481.793522616 ◽

2016 ◽

Author(s):

Morten Meldal ◽

Sanne Schoffelen

Keyword(s):

Mass Spectrometry ◽

Protein Interactions ◽

Affinity Purification ◽

Sortase A ◽

Site Specific ◽

SAINT: probabilistic scoring of affinity purification–mass spectrometry data

Nature Methods ◽

10.1038/nmeth.1541 ◽

2010 ◽

Vol 8 (1) ◽

pp. 70-73 ◽

Cited By ~ 414

Author(s):

Hyungwon Choi ◽

Brett Larsen ◽

Zhen-Yuan Lin ◽

Ashton Breitkreutz ◽

Dattatreya Mellacheruvu ◽

...

Keyword(s):

Mass Spectrometry ◽

Affinity Purification ◽

Mass Spectrometry Data ◽

Reinvestigation of Aminoacyl-TRNA Synthetase Core Complex by Affinity Purification-Mass Spectrometry Reveals TARSL2 as a Potential Member of the Complex

PLoS ONE ◽

10.1371/journal.pone.0081734 ◽

2013 ◽

Vol 8 (12) ◽

pp. e81734 ◽

Cited By ~ 11

Author(s):

Kyutae Kim ◽

Seong-Jun Park ◽

Seungjin Na ◽

Jun Seok Kim ◽

Hyungwon Choi ◽

...

Keyword(s):

Mass Spectrometry ◽

Affinity Purification ◽

Trna Synthetase ◽

Aminoacyl Trna Synthetase ◽

Core Complex ◽

Affinity Purification Mass Spectrometry ◽

Potential Member

SAINT-MS1: Protein–Protein Interaction Scoring Using Label-free Intensity Data in Affinity Purification-Mass Spectrometry Experiments

Journal of Proteome Research ◽

10.1021/pr201185r ◽

2012 ◽

Vol 11 (4) ◽

pp. 2619-2624 ◽

Cited By ~ 43

Author(s):

Hyungwon Choi ◽

Timo Glatter ◽

Mathias Gstaiger ◽

Alexey I. Nesvizhskii

Keyword(s):

Mass Spectrometry ◽

Protein Interaction ◽

Affinity Purification ◽

Intensity Data ◽

Label Free ◽

Protein Protein Interaction ◽