scholarly journals Molecular characterization of bulgarian livestock genetic resources, II: Microsatelite variation within and among Bulgarian cattle breeds

2007 ◽  
Vol 23 (5-6-1) ◽  
pp. 227-242 ◽  
Author(s):  
A. Teneva ◽  
E. Todorovska ◽  
N. Tyufekchiev ◽  
A. Stella ◽  
P. Boettcher ◽  
...  

This study was undertaken to determine the genetic structure and the diversity among 2 local cattle breeds from Bulgaria, the Rhodope Shorthorn and Grey cattle. A panel of 11 microsatellites was used for the evaluation. For these loci, allele frequencies, heterozygosity, HWE, genetic disequilibrium, genic differentiation were determined. Both populations displayed a relatively high level of genetic variation as estimated by allelic diversity and heterozygosity. Heterozygosities ranged from 0.5424 /SPS 115/ to 0.8983 /TGLA 227/ for the Rhodope population and 0.6333 /TGLA 53/ to 0.9333 /TGLA227/ for Grey cattle, with similar average values for the two groups - 0.7858 and 0.7757. These results clearly suggest that these breeds are suitable to preserve as a genetic resources.

Fruits ◽  
2011 ◽  
Vol 66 (1) ◽  
pp. 53-62 ◽  
Author(s):  
Taki Demir ◽  
Leyla Demirsoy ◽  
Hüsnü Demirsoy ◽  
Yıldız Aka Kaçar ◽  
Muharrem Yılmaz ◽  
...  

2019 ◽  
Vol 19 (1) ◽  
Author(s):  
Jill A. Nemacheck ◽  
Brandon J. Schemerhorn ◽  
Steven R. Scofield ◽  
Subhashree Subramanyam

Abstract Background The Hessian fly (Mayetiola destructor), belonging to the gall midge family (Cecidomyiidae), is a devastating pest of wheat (Triticum aestivum) causing significant yield losses. Despite identification and characterization of numerous Hessian fly-responsive genes and associated biological pathways involved in wheat defense against this dipteran pest, their functional validation has been challenging. This is largely attributed to the large genome, polyploidy, repetitive DNA, and limited genetic resources in hexaploid wheat. The diploid progenitor Aegilops tauschii, D-genome donor of modern-day hexaploid wheat, offers an ideal surrogate eliminating the need to target all three homeologous chromosomes (A, B and D) individually, and thereby making the functional validation of candidate Hessian fly-responsive genes plausible. Furthermore, the well-annotated sequence of Ae. tauschii genome and availability of genetic resources amenable to manipulations makes the functional assays less tedious and time-consuming. However, prior to utilization of this diploid genome for downstream studies, it is imperative to characterize its physical and molecular responses to Hessian fly. Results In this study we screened five Ae. tauschii accessions for their response to the Hessian fly biotypes L and vH13. Two lines were identified that exhibited a homozygous resistance response to feeding by both Hessian fly biotypes. Studies using physical measurements and neutral red staining showed that the resistant Ae. tauschii accessions resembled hexaploid wheat in their phenotypic responses to Hessian fly, that included similarities in larval developmental stages, leaf and plant growth, and cell wall permeability. Furthermore, molecular responses, characterized by gene expression profiling using quantitative real-time PCR, in select resistant Ae. tauschii lines also revealed similarities with resistant hexaploid wheat. Conclusions Phenotypic and molecular characterization of Ae. tauschii to Hessian fly infestation revealed resistant accessions that shared similarities to hexaploid wheat. Resembling the resistant hexaploid wheat, the Ae. tauschii accessions mount an early defense strategy involving defense proteins including lectins, secondary metabolites and reactive oxygen species (ROS) radicals. Our results reveal the suitability of the diploid progenitor for use as an ideal tool for functional genomics research in deciphering the wheat-Hessian fly molecular interactions.


2003 ◽  
Vol 1 (1) ◽  
pp. 11-18 ◽  
Author(s):  
M. O. Humphreys

AbstractUK agriculture is undergoing significant change with reduced subsidies for food production, increasing consumer demands for food safety and traceability, and environmental concerns including climate and demographic change. The International Treaty on Plant Genetic Resources for Food and Agriculture adopted by the United Nations Food and Agriculture Organisation supports the use of genetic resources for research and breeding. Mining genetic resources for useful genetic variation is perceived as a major benefit of genebanks. However, utilization by breeders may be constrained by poor characterization of genetic resources, a widening gap between improved and unimproved material, and the disruption of well- adapted genotypes during introgression. Breeders working with grasses and forage legumes for sustainable agriculture are fortunate in the wealth of genetic variation available both within the primary species of interest and among related species. New DNA technologies allow more targeted approaches to the use of these genetic resources. Possibilities for gene transfer between related species using conventional techniques expand the available gene pools while potential use of genetic transformation extend these even further.


2018 ◽  
Vol 75 (6) ◽  
pp. 509-518 ◽  
Author(s):  
Ioannis Ganopoulos ◽  
Nikolaos Tourvas ◽  
Aliki Xanthopoulou ◽  
Filippos A. Aravanopoulos ◽  
Euaggelia Avramidou ◽  
...  

2010 ◽  
Vol 54 (6) ◽  
pp. 2699-2703 ◽  
Author(s):  
Li-Yueh Huang ◽  
Po-Liang Lu ◽  
Te-Li Chen ◽  
Fang-Yee Chang ◽  
Chang-Phone Fung ◽  
...  

ABSTRACT The genetic structure of β-lactamases in Acinetobacter genospecies 3 (AG3) isolates in Taiwan was studied to analyze their high rates of resistance to β-lactams, including carbapenems (57.9%). bla IMP-1 and bla IMP-8 were located in a class 1 integron. bla OXA-58 was bracketed by ISAba3. A novel TnpF-like integrase gene was identified upstream of bla VEB-3. Adjacent to the 5′ sequence of the bla ADC gene, folE was identified. Four new Acinetobacter-derived cephalosporinase (ADC) enzymes were found, which clustered phylogenetically with published AG3 ADC proteins.


2015 ◽  
Vol 60 (2) ◽  
pp. 1129-1133 ◽  
Author(s):  
Jose A. Vazquez ◽  
Elias K. Manavathu

ABSTRACTMolecular characterization ofcyp51Afrom the azole-resistantAspergillus fumigatusisolate 50593 from a lung transplant patient showed Y121F/T289A changes coupled with a 46-bp tandem repeat (TR46) on the promoter, whereascyp51Afrom the pretherapy isolate,A. fumigatus47381, showed no changes. This is the first reported case ofA. fumigatusazole resistance due to Y121F/T289A/TR46 in the United States, suggesting that multiple mutational alterations ofcyp51Aresulting in high-level azole resistance could occur during prolonged antifungal therapy.


Sign in / Sign up

Export Citation Format

Share Document