Universal vs. pathogen-specific immune response responses categorized by cell-type specific responses

Author(s):  
Valerya Nisnevich
2012 ◽  
Vol 25 (4) ◽  
pp. 268-276 ◽  
Author(s):  
Moanaro Biswas ◽  
Sandeep R.P. Kumar ◽  
Adria Allen ◽  
Wang Yong ◽  
Ramadevi Nimmanapalli ◽  
...  

Immunity ◽  
2015 ◽  
Vol 43 (1) ◽  
pp. 52-64 ◽  
Author(s):  
Li-Fan Lu ◽  
Georg Gasteiger ◽  
I-Shing Yu ◽  
Ashutosh Chaudhry ◽  
Jing-Ping Hsin ◽  
...  

2019 ◽  
Author(s):  
Ying Hu ◽  
Mohini Ranganathan ◽  
Chang Shu ◽  
Xiaoyu Liang ◽  
Suhas Ganesh ◽  
...  

AbstractDelta 9-tetrahydrocannabinol (THC), the principal psychoactive constituent of cannabis, is also known to modulate immune response in peripheral cells. The mechanisms of THC’s effects on gene expression in human immune cells remains poorly understood. Combining a within-subject design with single cell transcriptome mapping, we report that administration of THC acutely alters gene expression in 15,973 human blood immune cells. Controlled for high inter-individual transcriptomic variability, we identified 294 transcriptome-wide significant genes among eight cell types including 69 common genes and 225 cell-type specific genes affected by acute THC administration, including those genes involving not only in immune response, cytokine production, but signal transduction, and cell proliferation and apoptosis. We revealed distinct transcriptomic sub-clusters affected by THC in major immune cell types where THC perturbed cell type-specific intracellular gene expression correlations. Gene set enrichment analysis further supports the findings of THC’s common and cell-type specific effects on immune response and cell toxicity. We found that THC alters the correlation of cannabinoid receptor gene, CNR2, with other genes in B cells, in which CNR2 showed the highest level of expression. This comprehensive cell-specific transcriptomic profiling identified novel genes regulated by THC and provides important insights into THC’s acute effects on immune function that may have important medical implications.


2020 ◽  
Author(s):  
Haley E Randolph ◽  
Zepeng Mu ◽  
Jessica K Fiege ◽  
Beth K Thielen ◽  
Jean-Christophe Grenier ◽  
...  

AbstractHumans vary in their susceptibility to infectious disease, partly due to variation in the immune response following infection. Here, we used single-cell RNA-sequencing to quantify genetic contributions to this variation in peripheral blood mononuclear cells, focusing specifically on the transcriptional response to influenza infection. We find that monocytes are the most responsive to influenza infection, but that all cell types mount a conserved interferon response, which is stronger in individuals with increased European ancestry. By comparing European American and African American individuals, we show that genetic ancestry effects on expression are common, influencing 29% of genes, but highly cell type-specific. Further, we demonstrate that much of this population-associated expression variation is explained by cis expression quantitative trait loci, which are enriched for signatures of recent positive selection. Our findings establish common cis-regulatory variants—including those that are differentiated by genetic ancestry—as important determinants of the antiviral immune response.


2017 ◽  
Vol 55 (05) ◽  
pp. e28-e56
Author(s):  
S Macheiner ◽  
R Gerner ◽  
A Pfister ◽  
A Moschen ◽  
H Tilg

Sign in / Sign up

Export Citation Format

Share Document