Charge Reduction of Membrane Proteins in Native Mass Spectrometry Using Alkali Metal Acetate Salts

Author(s):  
John T. Petroff II ◽  
Ailing Tong ◽  
Lawrence Chen ◽  
GregoryT. DeKoster ◽  
Farha Khan ◽  
...  

<p>Native mass spectrometry paired with ion mobility (IM-MS) provides the capacity to monitor the structure of protein complexes and simultaneously assess small molecule binding to the protein. Native IM-MS typically utilizes positive mode electrospray ionization producing a distribution of multiply charged protein species. For membrane proteins, these charge states are often too high resulting in protein gas phase unfolding or loss of noncovalent interactions. In an effort to reduce the charge of membrane proteins, the utility of alkali metal salts as a charge reducing additive was explored. Low concentrations of alkali metal salts caused marked charge reduction in the membrane protein, ELIC. The charge reducing effect was only present in membrane proteins, and could not be accounted for by conformational changes in ELIC structure. Charge reduction by alkali metal salts was also detergent dependent, and was most pronounced in long PEG-based detergents such as C10E5 and C12E8. Based on these results, a mechanism was posited for alkali metal charge reduction of membrane proteins. Addition of low concentration of alkali metals may provide an advantageous approach for charge reduction of detergent solubilized membrane proteins by native MS. <br></p>

2019 ◽  
Author(s):  
John T. Petroff II ◽  
Ailing Tong ◽  
Lawrence Chen ◽  
GregoryT. DeKoster ◽  
Farha Khan ◽  
...  

<p>Native mass spectrometry paired with ion mobility (IM-MS) provides the capacity to monitor the structure of protein complexes and simultaneously assess small molecule binding to the protein. Native IM-MS typically utilizes positive mode electrospray ionization producing a distribution of multiply charged protein species. For membrane proteins, these charge states are often too high resulting in protein gas phase unfolding or loss of noncovalent interactions. In an effort to reduce the charge of membrane proteins, the utility of alkali metal salts as a charge reducing additive was explored. Low concentrations of alkali metal salts caused marked charge reduction in the membrane protein, ELIC. The charge reducing effect was only present in membrane proteins, and could not be accounted for by conformational changes in ELIC structure. Charge reduction by alkali metal salts was also detergent dependent, and was most pronounced in long PEG-based detergents such as C10E5 and C12E8. Based on these results, a mechanism was posited for alkali metal charge reduction of membrane proteins. Addition of low concentration of alkali metals may provide an advantageous approach for charge reduction of detergent solubilized membrane proteins by native MS. <br></p>


2020 ◽  
Vol 92 (9) ◽  
pp. 6622-6630 ◽  
Author(s):  
John T. Petroff ◽  
Ailing Tong ◽  
Lawrence J. Chen ◽  
Gregory T. Dekoster ◽  
Farha Khan ◽  
...  

2012 ◽  
Vol 27 ◽  
pp. 321-328
Author(s):  
E. Regulska ◽  
M. Samsonowicz ◽  
R. Świsłocka ◽  
W. Lewandowski

Optimized geometrical structures of alkali metal phenoxyacetates were obtained using B3LYP/6-311++G** method. Geometric and magnetic aromaticity indices, dipole moments, and energies were calculated. Atomic charges on the atoms of phenoxyacetic acid molecule and its alkali metal salts were calculated by Mulliken, APT (atomic polar tensor), NPA (natural population analysis), MK (Merz-Singh-Kollman method), and ChelpG (charges from electrostatic potentials using grid-based method) methods. The theoretical wavenumbers and intensities of IR as well as chemical shifts in NMR spectra were obtained and compared with experimental data. The effect of alkali metals on molecular structure of phenoxyacetic acid appears in the shift of selected bands along the series of alkali metal salts. The correlations between chosen bands and some metal parameters, such as electronegativity, ionization energy, and atomic, and ionic radius, have been noticed.


1968 ◽  
Vol 72 (4) ◽  
pp. 1111-1116 ◽  
Author(s):  
James F. Rounsaville ◽  
Joseph J. Lagowski

2015 ◽  
Vol 396 (9-10) ◽  
pp. 991-1002 ◽  
Author(s):  
Albert Konijnenberg ◽  
Jeroen F. van Dyck ◽  
Lyn L. Kailing ◽  
Frank Sobott

Abstract Recent developments in native mass spectrometry and ion mobility have made it possible to analyze the composition and structure of membrane protein complexes in the gas-phase. In this short review we discuss the experimental strategies that allow to elucidate aspects of the dynamic structure of these important drug targets, such as the structural effects of lipid binding or detection of co-populated conformational and assembly states during gating on an ion channel. As native mass spectrometry relies on nano-electrospray of natively reconstituted proteins, a number of commonly used lipid- and detergent-based reconstitution systems have been evaluated for their compatibility with this approach, and parameters for the release of intact, native-like folded membrane proteins studied in the gas-phase. The strategy thus developed can be employed for the investigation of the subunit composition and stoichiometry, oligomeric state, conformational changes, and lipid and drug binding of integral membrane proteins.


1979 ◽  
Vol 57 (9) ◽  
pp. 999-1005 ◽  
Author(s):  
E. Buncel ◽  
B. C. Menon ◽  
J. P. Colpa

A spectrophotometric study of diphenylmethyllithium (DPM−Li+) and diphenylmethyl-potassium (DPM−K+) in ethereal solvents has yielded information on ion pairing and solvation phenomena in these carbanion systems. Different spectral absorptions are observed, characteristic of two types of contact ion pairs (unsolvated and partially solvated) as well as the solvent separated ion pair species, on varying the cation and solvent. This contrasts with our previous observations with triphenylmethyl alkali metal salts where only contact and solvent separated ion pairs were observed. The effect of 18-crown-6 polyether and the effect of temperature changes on the ion pairing equilibria are evaluated. Thermodynamic parameters are obtained for equilibria pertaining to the DPM−Li+/THF and DPM−Li+/DME systems. The results are discussed in relation to literature reports on ion pairing in these systems as derived from nmr studies. Comparison with triphenylmethyl alkali metal salts yields information relating to delocalization and steric effects on ion pairing.


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