scholarly journals ATP-Dependent Diffusion Entropy and Homogeneity in Living Cells

Entropy ◽  
2019 ◽  
Vol 21 (10) ◽  
pp. 962 ◽  
Author(s):  
Wohl ◽  
Sherman

Intracellular dynamics is highly complex, and includes diffusion of poly-dispersed objects in a non-homogeneous, out-of-equilibrium medium. Assuming non-equilibrium steady-state, we developed a framework that relates non-equilibrium fluctuations to diffusion, and generalized entropy in cells. We employed imaging of live Jurkat T cells, and showed that active cells have higher diffusion parameters (Kα and α) and entropy relative to the same cells after ATP depletion. Kα and α were related in ATP-depleted cells while this relation was not apparent in untreated cells, probably due to non-equilibrium applied work. Next we evaluated the effect of intracellular diffusion and entropy on the cell content homogeneity, which was displayed by the extent of its liquid–liquid phase separation (LLPS). Correlations between intracellular diffusion parameters, entropy and cell homogeneity could be demonstrated only in active cells while these correlations disappeared after ATP depletion. We conclude that non-equilibrium contributions to diffusivity and entropy by ATP-dependent mechanical work allow cells to control their content homogeneity and LLPS state. Such understanding may enable better intervention in extreme LLPS conditions associated with various cell malignancies and degenerative diseases.

Polymers ◽  
2019 ◽  
Vol 11 (6) ◽  
pp. 990 ◽  
Author(s):  
April L. Darling ◽  
Boris Y. Zaslavsky ◽  
Vladimir N. Uversky

The visible outcome of liquid-liquid phase transitions (LLPTs) in cells is the formation and disintegration of various proteinaceous membrane-less organelles (PMLOs). Although LLPTs and related PMLOs have been observed in living cells for over 200 years, the physiological functions of these transitions (also known as liquid-liquid phase separation, LLPS) are just starting to be understood. While unveiling the functionality of these transitions is important, they have come into light more recently due to the association of abnormal LLPTs with various pathological conditions. In fact, several maladies, such as various cancers, different neurodegenerative diseases, and cardiovascular diseases, are known to be associated with either aberrant LLPTs or some pathological transformations within the resultant PMLOs. Here, we will highlight both the physiological functions of cellular liquid-liquid phase transitions as well as the pathological consequences produced through both dysregulated biogenesis of PMLOs and the loss of their dynamics. We will also discuss the potential downstream toxic effects of proteins that are involved in pathological formations.


2019 ◽  
Vol 16 (1) ◽  
pp. 15-20 ◽  
Author(s):  
Jordan M. Horowitz ◽  
Todd R. Gingrich

2016 ◽  
Vol 28 (4) ◽  
pp. 467-475 ◽  
Author(s):  
Fabrizio Croccolo ◽  
Cédric Giraudet ◽  
Henri Bataller ◽  
Roberto Cerbino ◽  
Alberto Vailati

2017 ◽  
Vol 31 (01) ◽  
pp. 1650425 ◽  
Author(s):  
E. A. Melkikh ◽  
A. V. Melkikh ◽  
V. I. Tokmantsev

As a result of numerical modeling the dependence of relative mean-square fluctuation of evaporating particles for the ring of material points interacting via gravitational forces is obtained. It is shown that this dependence is [Formula: see text], where [Formula: see text] = 0.39–0.6 for different virial ratios. The dependence of a fraction of evaporated particles on the width of the ring and on the ratio between the average kinetic and potential energy of the particles is obtained. The dependence of mean square deviation of fraction of evaporated particles on time was investigated. It was concluded that the concept “entropy” (as well as other thermodynamical parameters) could not be correctly introduced in the systems with gravity.


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