scholarly journals Pseudomonas PS01 Isolated from Maize Rhizosphere Alters Root System Architecture and Promotes Plant Growth

2020 ◽  
Vol 8 (4) ◽  
pp. 471 ◽  
Author(s):  
Thanh Nguyen Chu ◽  
Le Van Bui ◽  
Minh Thi Thanh Hoang
Keyword(s):  
Plant Growth ◽  
Root System ◽  
System Architecture ◽  
High Throughput Sequencing ◽  
Primary Root ◽  
Root System Architecture ◽  
Potential Candidate ◽  
Maize Rhizosphere ◽  
Plant Growth Promoting ◽  
Growth Promoting

The objectives of this study were to evaluate the plant growth promoting effects on Arabidopsis by Pseudomonas sp. strains associated with rhizosphere of crop plants grown in Mekong Delta, Vietnam. Out of all the screened isolates, Pseudomonas PS01 isolated from maize rhizosphere showed the most prominent plant growth promoting effects on Arabidopsis and maize (Zea mays). We also found that PS01 altered root system architecture (RSA). The full genome of PS01 was resolved using high-throughput sequencing. Phylogenetic analysis identified PS01 as a member of the Pseudomonas putida subclade, which is closely related to Pseudomonas taiwanensis.. PS01 genome size is 5.3 Mb, assembled in 71 scaffolds comprising of 4820 putative coding sequence. PS01 encodes genes for the indole-3-acetic acid (IAA), acetoin and 2,3-butanediol biosynthesis pathways. PS01 promoted the growth of Arabidopsis and altered the root system architecture by inhibiting primary root elongation and promoting lateral root and root hair formation. By employing gene expression analysis, genetic screening and pharmacological approaches, we suggested that the plant-growth promoting effects of PS01 and the alteration of RSA might be independent of bacterial auxin and could be caused by a combination of different diffusible compounds and volatile organic compounds (VOCs). Taken together, our results suggest that PS01 is a potential candidate to be used as bio-fertilizer agent for enhancing plant growth.

Plant growth-promoting rhizobacteria modulate root-system architecture in Arabidopsis thaliana through volatile organic compound emission

Symbiosis ◽  
2010 ◽  
Vol 51 (1) ◽  
pp. 75-83 ◽  
Author(s):  
Francisca M. Gutiérrez-Luna ◽  
José López-Bucio ◽  
Josué Altamirano-Hernández ◽  
Eduardo Valencia-Cantero ◽  
Homero Reyes de la Cruz ◽  
...  
Keyword(s):  
Arabidopsis Thaliana ◽  
Organic Compound ◽  
Plant Growth ◽  
System Architecture ◽  
Plant Growth Promoting Rhizobacteria ◽  
Root System Architecture ◽  
Volatile Organic Compound Emission ◽  
Volatile Organic ◽  
Plant Growth Promoting ◽  
Growth Promoting

scholarly journals Comprehensive Genome-Wide Association Analysis Reveals the Genetic Basis of Root System Architecture in Soybean

2020 ◽  
Vol 11 ◽  
Author(s):  
Waldiodio Seck ◽  
Davoud Torkamaneh ◽  
François Belzile
Keyword(s):  
Root System ◽  
System Architecture ◽  
Phenotypic Variation ◽  
Genetic Basis ◽  
Genome Wide Association Study ◽  
Primary Root ◽  
Root System Architecture ◽  
Genome Wide Association ◽  
Nucleotide Polymorphisms ◽  
Genome Wide

Increasing the understanding genetic basis of the variability in root system architecture (RSA) is essential to improve resource-use efficiency in agriculture systems and to develop climate-resilient crop cultivars. Roots being underground, their direct observation and detailed characterization are challenging. Here, were characterized twelve RSA-related traits in a panel of 137 early maturing soybean lines (Canadian soybean core collection) using rhizoboxes and two-dimensional imaging. Significant phenotypic variation (P < 0.001) was observed among these lines for different RSA-related traits. This panel was genotyped with 2.18 million genome-wide single-nucleotide polymorphisms (SNPs) using a combination of genotyping-by-sequencing and whole-genome sequencing. A total of 10 quantitative trait locus (QTL) regions were detected for root total length and primary root diameter through a comprehensive genome-wide association study. These QTL regions explained from 15 to 25% of the phenotypic variation and contained two putative candidate genes with homology to genes previously reported to play a role in RSA in other species. These genes can serve to accelerate future efforts aimed to dissect genetic architecture of RSA and breed more resilient varieties.

scholarly journals Forage Mass, Tillering, Nutritive Value and Root System of Ruzigrass Inoculated with Plant Growth Promoting Bacteria Associated with Doses of N-Fertilizer

2020 ◽  
Vol 8 (10) ◽  
pp. 41-55
Author(s):  
Artur Roque Domingues Barreiros ◽  
Ulysses Cecato ◽  
Camila Fernandes Domingues Duarte ◽  
Mariangela Hungria ◽  
Thiago Trento Biserra ◽  
...  
Keyword(s):  
Plant Growth ◽  
Root System ◽  
Nutritive Value ◽  
Block Design ◽  
N Fertilizer ◽  
Neutral Detergent Fiber ◽  
In Vitro Digestibility ◽  
Plant Growth Promoting Bacteria ◽  
Plant Growth Promoting ◽  
Growth Promoting

The aim of this study was evaluating the effect of the inoculation of plant growth promoting bacteria (PGPB) in forage mass, tillering, nutritive value and root system of ruzigrass (Urochloa ruziziensis (R. Germ. & Evrard) Crins (syn. of Brachiaria ruziziensis) associated with doses of N-fertilizer. The bacteria inoculated were Azospirillum brasilense Ab-V5, Pseudomonas fluorescens CCTB03 and Pantoea ananatis AMG 521, plus the control treatment (non-inoculated), associated with doses of N-fertilizer (0, 50 and 100 kg N ha-1). The experiment was performed in a randomized block design, in a 4x3 factorial scheme, with four replicates, totaling 48 plots (12 m2). There were no effects of the PGPB and the use of N-fertilizer on the leaf blade, stem+sheath, forage mass, daily and yearly accumulation of forage mass. The PGPB did not have influence on the density of tillers. The doses of 50 and 100 kg of N ha-1 increased the amount of tillers. The AMG 521 strain associated with N-fertilizer provided heavier tillers. There was no effect of the PGPB on crude protein (CP), neutral detergent fiber (NDF), as well as acid detergent fiber (ADF), and in vitro digestibility of the dry matter (IVDDM).  The use of 100 kg of N ha-1 contributed to an increase in CP and a decrease in NDF. The AMG 521 strain contributed to a smaller diameter of the root. Strains CCTB03 and AMG 521 demonstrated a smaller area, length and root density when associated with the dose of 50kg of N ha-1. In general, the PGPB were not efficient in promoting productive increments in ruzigrass.

scholarly journals AT-HOOK MOTIF NUCLEAR LOCALISED PROTEIN 18 as a Novel Modulator of Root System Architecture

2020 ◽  
Author(s):  
Marek Šírl ◽  
Tereza Šnajdrová ◽  
Dolores Gutiérrez-Alanís ◽  
Joseph G. Dubrovsky ◽  
Jean Phillipe Vielle-Calzada ◽  
...  
Keyword(s):  
Root System ◽  
System Architecture ◽  
Lateral Root ◽  
Apical Meristem ◽  
Lateral Roots ◽  
Primary Root ◽  
Root System Architecture ◽  
Root Apical Meristem ◽  
Root Initiation ◽  
Lateral Root Initiation

The AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN (AHL) gene family encodes embryophyte-specific nuclear proteins with DNA binding activity. They modulate gene expression and affect various developmental processes in plants. We identify AHL18 (At3G60870) as a developmental modulator of root system architecture and growth. AHL18 regulates the length of the proliferation domain and number of dividing cells in the root apical meristem and thereby, cell production. Both primary root growth and lateral root development respond according to AHL18 transcription level. The ahl18 knock-out plants show reduced root systems due to a shorter primary root and a lower number of lateral roots. This change results from a higher number of arrested and non-developing lateral root primordia (LRP) rather than from decreased initiation. Overexpression of AHL18 results in a more extensive root system, longer primary roots, and increased density of lateral root initiation events. Formation of lateral roots is affected during the initiation of LRP and later development. AHL18 regulate root apical meristem activity, lateral root initiation and emergence, which is in accord with localization of its expression.

Stimulation of the ionic transport system in Brassica napus by a plant growth-promoting rhizobacterium (Achromobacter sp.)

2000 ◽  
Vol 46 (3) ◽  
pp. 229-236 ◽  
Author(s):  
H Bertrand ◽  
C Plassard ◽  
X Pinochet ◽  
B Touraine ◽  
P Normand ◽  
...  
Keyword(s):  
Brassica Napus ◽  
Plant Growth ◽  
Root System ◽  
Oilseed Rape ◽  
Root Zone ◽  
Growth Promotion ◽  
Mineral Nutrient ◽  
Plant Growth Promoting ◽  
Growth Promoting ◽  
Achromobacter Sp

A plant growth-promoting rhizobacterium belonging to the genus Achromobacter was isolated from the oilseed-rape (Brassica napus) root. Growth promotion bioassays were performed with oilseed rape seedlings in a growth chamber in test tubes containing attapulgite and mineral nutrient solution, containing NO3- as N source. The presence of this Achromobacter strain increased shoot and root dry weight by 22-33% and 6-21%, respectively. Inoculation of young seedlings with the Achromobacter bacteria induced a 100% improvement in NO3- uptake by the whole root system. Observations on the seminal root of seedlings 20 h after inoculation showed that there was an enhancement of both the number and the length of root hairs, compared to non-inoculated seedlings. Electrophysiological measurements of NO3- net flux with ion-selective microelectrodes showed that inoculation resulted in a specific increase of net nitrate flux in a root zone morphologically similar in inoculated and non-inoculated plants. The root area increased due to root hair stimulation by the Achromobacter bacteria, which might have contributed to the improvement of NO3- uptake by the whole root system, together with the enhancement of specific NO3- uptake rate. Moreover, inoculated plants showed increased potassium net influx and proton net efflux. Overall, the data presented suggest that the inoculation of oilseed-rape with the bacteria Achromobacter affects the mineral uptake.Key words: Brassica napus, plant growth-promoting rhizobacteria, Achromobacter sp., mineral uptake, root morphology.

scholarly journals Diversity of Endophytic Bacteria Associated with Different Cultivars of Medicinal Plant Arctium Lappa L. and Their Potential for Host Plant Growth Promoting

2021 ◽  
Author(s):  
Jia-Qi Liu ◽  
Chun-Mei Zhang ◽  
Yuan Gong ◽  
Ming-Jie Xu ◽  
Ke Xing ◽  
...  
Keyword(s):  
Bacterial Community ◽  
Plant Growth ◽  
Endophytic Bacteria ◽  
High Throughput Sequencing ◽  
Promoting Effect ◽  
Pgp Traits ◽  
Arctium Lappa ◽  
Bacterial Phyla ◽  
Plant Growth Promoting ◽  
Growth Promoting

Abstract Purpose Arctium lappa L. is one of the medicinal and food homologous plants in China, which is rich in nutrients and medicinal ingredients. The use of plant growth promoting (PGP) endophytic bacteria is a useful alternative in agricultural production to reduce the use of chemical fertilizers. The aim of this study was to analysis the diversity of endophytic bacteria in different cultivars of A. lappa L. collected from two different geographical locations in China and evaluate PGP traits of the isolates and their potential PGP ability in greenhouse condition. Methods Endophytic bacterial community was investigated by culture-dependent and culture-independent methods. Isolates were screened and investigated for multiple PGP traits, and representative strains were inoculated host seedlings to evaluate the growth promoting effect. Results A total of 348 endophytic bacteria were obtained and they distributed into four phyla, 30 genera and 73 different species. In addition, high throughput sequencing revealed more abundant bacterial community, including 17 bacterial phyla, and 207 different known genera. A high proportion of PGP traits were detected, including production of indole acetic acid, siderophore, ammonia and phosphate solubilization. Four representative strains with multiple PGP traits of the most prevalent genera were further selected for host inoculation and growth promoting evaluation, and they significantly increase seedlings length, root length and fresh weight. Conclusion This study demonstrated that A. lappa L. harbors abundant endophytic bacteria, and plant genotype and geographical origin affect their composition. Moreover, some endophytic bacteria showed good potential for the development of microbial fertilizer in the future.

The growth-promoting effects of a bacterial endophyte on lodgepole pine are partially inhibited by the presence of other rhizobacteria

1998 ◽  
Vol 44 (10) ◽  
pp. 980-988 ◽  
Author(s):  
Elizabeth Bent ◽  
Christopher P Chanway
Keyword(s):  
Plant Growth ◽  
Growth Promotion ◽  
Lodgepole Pine ◽  
Primary Root ◽  
Biomass Accumulation ◽  
Plant Growth Promoting Rhizobacteria ◽  
Shoot Biomass ◽  
Bacillus Polymyxa ◽  
Plant Growth Promoting ◽  
Growth Promoting

To test the hypothesis that rhizobacteria naturally present in soils may interfere with the extent of root colonization and plant growth promotion by plant growth-promoting rhizobacteria (PGPR), we studied two lodgepole pine PGPR (Bacillus polymyxa strains L6 and Pw-2) when inoculated singly and when coinoculated with a non-PGPR competitor (Curtobacterium flaccumfaciens PF322). Bacillus polymyxa Pw-2 and Curtobacterium flaccumfaciens PF322 were consistently found as endophytes, while Bacillus polymyxa L6 was never found within the root interior. Strains Pw-2 and L6 differed in the rate and type of growth promotion. Strain Pw-2 increased root growth (branching and elongation) and shoot biomass accumulation 6 and 9 weeks, respectively, after inoculation, while strain L6 increased primary root elongation and root biomass accumulation after 12 weeks. Seedlings coinoculated with Pw-2 and PF322 had decreased shoot biomass and primary root lengths when compared with seedlings inoculated only with Pw-2. This effect was not linked to a decrease in the population size of Pw-2 in the rhizosphere or in the root interior of coinoculated treatments. In contrast, strain L6-mediated growth promotion was not impaired by coinoculation with PF322. Strain L6 did interfere to some degree with the growth-promoting capability of strain Pw-2. These results indicate that endophytic PGPR may be less adapted to microbial competition than external root-colonizing PGPR, and that the efficacy of endophytic PGPR may be reduced by the presence of other bacteria on external or internal root tissues.Key words: PGPR, endophytes, colonization, coinoculation, competition.

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