scholarly journals Investigating the Diversity of Marine Bacteriophage in Contrasting Water Masses Associated with the East Australian Current (EAC) System

Viruses ◽  
2020 ◽  
Vol 12 (3) ◽  
pp. 317 ◽  
Author(s):  
Amaranta Focardi ◽  
Martin Ostrowski ◽  
Kirianne Goossen ◽  
Mark V. Brown ◽  
Ian Paulsen
Keyword(s):  
Microbial Communities ◽  
Dna Sequences ◽  
Abiotic Factors ◽  
Western Boundary Current ◽  
Viral Diversity ◽  
Western Boundary ◽  
East Australian Current ◽  
Boundary Current ◽  
Regional Patterns ◽  
Marine Productivity

Virus- and bacteriophage-induced mortality can have a significant impact on marine productivity and alter the flux of nutrients in marine microbial food-webs. Viral mediated horizontal gene transfer can also influence host fitness and community composition. However, there are very few studies of marine viral diversity in the Southern Hemisphere, which hampers our ability to fully understand the complex interplay of biotic and abiotic factors that shape microbial communities. We carried out the first genetic study of bacteriophage communities within a dynamic western boundary current (WBC) system, the east Australian current (EAC). Virus DNA sequences were extracted from 63 assembled metagenomes and six metaviromes obtained from various depths at 24 different locations. More than 1700 bacteriophage genomic fragments (>9 kbps) were recovered from the assembled sequences. Bacteriophage diversity displayed distinct depth and regional patterns. There were clear differences in the bacteriophage populations associated with the EAC and Tasman Sea euphotic zones, at both the taxonomic and functional level. In contrast, bathypelagic phages were similar across the two oceanic regions. These data provide the first characterisation of viral diversity across a dynamic western boundary current, which is an emerging model for studying the response of microbial communities to climate change.

scholarly journals Transport variability over the Hawkesbury Shelf (31.5–34.5°S) driven by the East Australian Current

PLoS ONE ◽  
2020 ◽  
Vol 15 (11) ◽  
pp. e0241622
Author(s):  
Nina Ribbat ◽  
Moninya Roughan ◽  
Brian Powell ◽  
Shivanesh Rao ◽  
Colette Gabrielle Kerry
Keyword(s):  
Western Boundary Current ◽  
Western Boundary ◽  
East Australian Current ◽  
Boundary Current ◽  
High Productivity ◽  
Shelf Circulation ◽  
Southeastern Australia ◽  
Temperature Regimes ◽  
Tasman Sea ◽  
Shelf Region

The Hawkesbury Bioregion located off southeastern Australia (31.5–34.5oS) is a region of highly variable circulation. The region spans the typical separation point of the East Australian Current (EAC), the western boundary current that dominates the flow along the coast of SE Australia. It lies adjacent to a known ocean warming hotspot in the Tasman Sea, and is a region of high productivity. However, we have limited understanding of the circulation, temperature regimes and shelf transport in this region, and the drivers of variability. We configure a high resolution (750m) numerical model for the Hawkesbury Shelf region nested inside 2 data assimilating models of decreasing resolution, to obtain the best estimate of the shelf circulation and transport over a 2-yr period (2012–2013). Here we show that the transport is driven by the mesoscale EAC circulation that strengthens in summer and is related to the separation of the EAC jet from the coast. Transport estimates show strong offshore export is a maximum between 32-33oS. Median offshore transports range 2.5–8.4Sv seasonally and are a maximum during in summer driven by the separation of the EAC jet from the coast. The transport is more variable downstream of the EAC separation, driven by the EAC eddy field. Onshore transport occurs more frequently off Sydney 33.5–34.5oS; seasonal medians range -1.7 to 2.3Sv, with an onshore maximum in winter. The region is biologically productive, and it is a known white shark nursery area despite the dominance of the oligotrophic western boundary current. Hence an understanding of the drivers of circulation and cross-shelf exchange is important.

scholarly journals Frequency-Domain Analysis of the Energy Budget in an Idealized Coupled Ocean–Atmosphere Model

2020 ◽  
Vol 33 (2) ◽  
pp. 707-726 ◽  
Author(s):  
Paige E. Martin ◽  
Brian K. Arbic ◽  
Andrew McC. Hogg ◽  
Andrew E. Kiss ◽  
James R. Munroe ◽  
...  
Keyword(s):  
Frequency Domain ◽  
Time Scales ◽  
Energy Budget ◽  
Western Boundary Current ◽  
Spectral Energy ◽  
Western Boundary ◽  
Intrinsic Variability ◽  
Boundary Current ◽  
Ocean Atmosphere ◽  
Atmosphere Model

AbstractClimate variability is investigated by identifying the energy sources and sinks in an idealized, coupled, ocean–atmosphere model, tuned to mimic the North Atlantic region. The spectral energy budget is calculated in the frequency domain to determine the processes that either deposit energy into or extract energy from each fluid, over time scales from one day up to 100 years. Nonlinear advection of kinetic energy is found to be the dominant source of low-frequency variability in both the ocean and the atmosphere, albeit in differing layers in each fluid. To understand the spatial patterns of the spectral energy budget, spatial maps of certain terms in the spectral energy budget are plotted, averaged over various frequency bands. These maps reveal three dynamically distinct regions: along the western boundary, the western boundary current separation, and the remainder of the domain. The western boundary current separation is found to be a preferred region to energize oceanic variability across a broad range of time scales (from monthly to decadal), while the western boundary itself acts as the dominant sink of energy in the domain at time scales longer than 50 days. This study paves the way for future work, using the same spectral methods, to address the question of forced versus intrinsic variability in a coupled climate system.

scholarly journals Midlatitude–Equatorial Dynamics of a Grounded Deep Western Boundary Current. Part I: Midlatitude Flow and the Transition to the Equatorial Region

2015 ◽  
Vol 45 (10) ◽  
pp. 2457-2469 ◽  
Author(s):  
Gordon E. Swaters
Keyword(s):  
Bottom Topography ◽  
Zonal Flow ◽  
Ocean Basin ◽  
Equatorial Region ◽  
Western Boundary Current ◽  
Western Boundary ◽  
Boundary Current ◽  
Qualitative Properties ◽  
Deep Western Boundary Current ◽  
The Tropics

AbstractA comprehensive theoretical study of the nonlinear hemispheric-scale midlatitude and cross-equatorial steady-state dynamics of a grounded deep western boundary current is given. The domain considered is an idealized differentially rotating, meridionally aligned basin with zonally varying parabolic bottom topography so that the model ocean shallows on both the western and eastern sides of the basin. Away from the equator, the flow is governed by nonlinear planetary geostrophic dynamics on sloping topography in which the potential vorticity equation can be explicitly solved. As the flow enters the equatorial region, it speeds up and becomes increasingly nonlinear and passes through two distinguished inertial layers referred to as the “intermediate” and “inner” inertial equatorial boundary layers, respectively. The flow in the intermediate equatorial region is shown to accelerate and turn eastward, forming a narrow equatorial jet. The qualitative properties of the solution presented are consistent with the known dynamical characteristics of the deep western boundary currents as they flow from the midlatitudes into the tropics. The predominately zonal flow across the ocean basin in the inner equatorial region (and its exit from the equatorial region) is determined in Part II of this study.

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