scholarly journals Viral Phrenology

Viruses ◽  
2021 ◽  
Vol 13 (11) ◽  
pp. 2191
Author(s):  
David P. Wilson ◽  
Danielle A. Roof
Keyword(s):  
Genetic Composition ◽  
Viral Capsids ◽  
Triangulation Number

We introduce Viral Phrenology, a new scheme for understanding the genomic composition of spherical viruses based on the locations of their structural protrusions. We used icosahedral point arrays to classify 135 distinct viral capsids collected from over 600 capsids available in the VIPERdb. Using gauge points of point arrays, we found 149 unique structural protrusions. We then show how to use the locations of these protrusions to determine the genetic composition of the virus. We then show that ssDNA, dsDNA, dsRNA and ssRNA viruses use different arrangements for distributing their protrusions. We also found that Triangulation number is also partially dependent on the structural protrusions. This analysis begins to tie together Baltimore Classification and Triangulation number using point arrays.

scholarly journals Viral Phrenology

2021 ◽  
Author(s):  
David P Wilson ◽  
Danielle Roof
Keyword(s):  
Genetic Composition ◽  
Viral Capsids ◽  
Triangulation Number

We introduce Viral Phrenology, a new scheme for understanding the genomic composition of spherical viruses base on the locations of their structural protrusions. We used icosahedral point arrays to classify 135 distinct viral capsids collected from over 600 capsids available in the VIPERdb. Using gauge points of point arrays, we found 149 unique structural protrusions. We then show how to use the locations of these protrusions to determine the genetic composition of the virus. We then show that ssDNA, dsDNA, dsRNA and ssRNA viruses use different arrangements for distributing their protrusions. We also found that Triangulation number is also partially dependent on the structural protrusions. This analysis begins to tie together Baltimore classification and Triangulation number using point arrays.

Computers and Iatrocomplexities

1966 ◽  
Vol 05 (04) ◽  
pp. 167-171 ◽  
Author(s):  
L. E. Faer
Keyword(s):  
Twentieth Century ◽  
Cigarette Smoke ◽  
Environmental Pollutants ◽  
Genetic Composition ◽  
Koch’S Postulates ◽  
Lung Malignancies ◽  
Causative Agents ◽  
Disease Study ◽  
Multiple Etiology ◽  
Great Advance

Developments of disease hypotheses and conceptions of disease as philosophic entities have shown bursts of great advance. One just concluded includes emergence of bacteriology and virology culminating in Koch’s Postulates, which in the twentieth century were primary bases for disease study and colored all approaches to medicine.With recent extraordinary advances in technology, medicine faces great new obligations demanding fresh approaches and untrammeled thinking for solution of problems posed. It is clear that any approach to diseases and disabilities induced by exposures to environmental pollutants must take multiple etiology into account. For example, contributing to causation of lung malignancies one must list usual dusts, radioactivity, smog, auto exhausts, cigarette smoke and genetic composition. Consideration of plural factors in genesis of environmentally associated disease leads to the hypothesis of the incremental insult, a complex and difficult conception in which must be included provision for multiple causative agents, each contributing but a fraction toward total etiology^ Computers developed to their present refinement provide necessary tools for whatever complexity required to spawn and fructify hypotheses of inter-relating associations of incremental insults leading to pathology.

Genetic Composition and Its Transmissibility Analysis of Wheat Candidate Backbone Parent Kenong 9204

2015 ◽  
Vol 41 (4) ◽  
pp. 574 ◽  
Author(s):  
Chun-Hua ZHAO ◽  
Xiao-Li FAN ◽  
Wei-Lian WANG ◽  
Wei ZHANG ◽  
Jie HAN ◽  
...  
Keyword(s):  
Genetic Composition

Genetic diversity of native cultivated cacao accessions (Theobroma cacao L.) in Nicaragua

2012 ◽  
Vol 10 (3) ◽  
pp. 254-257
Author(s):  
Erwin Aragon ◽  
Claudia Rivera ◽  
Helena Korpelainen ◽  
Aldo Rojas ◽  
Paula Elomaa ◽  
...  
Keyword(s):  
Genetic Diversity ◽  
Theobroma Cacao ◽  
Phytophthora Palmivora ◽  
Genetic Composition ◽  
Breeding Programmes ◽  
Black Pod ◽  
Black Pod Disease ◽  
Parental Lines ◽  
Resistant Genotypes ◽  
Theobroma Cacao L

A total of 60 farmers' cacao accessions (Theobroma cacao L.) from Nicaragua were investigated using microsatellite markers to reveal their genetic composition and to identify potentially resistant genotypes against the black pod disease caused by Phytophthora palmivora. These accessions were compared with 21 breeders' accessions maintained locally, two Criollo accessions from Costa Rica and two accessions from Ecuador. The analyses showed a low level of differentiation among groups of farmers' accessions (FST = 0.06) and that six Nicaraguan accessions were genetically closely related to the two Criollo accessions used as a reference. In addition, seven distinct genotypes were found to have allelic composition that may indicate linkage to resistance alleles, thus being potential parental lines in future breeding programmes.

scholarly journals Genetic composition of interspecific potato somatic hybrids and autofused 4x plants evaluated by DArT and cytoplasmic DNA markers

2016 ◽  
Vol 35 (6) ◽  
pp. 1345-1358 ◽  
Author(s):  
Paulina Smyda-Dajmund ◽  
Jadwiga Śliwka ◽  
Iwona Wasilewicz-Flis ◽  
Henryka Jakuczun ◽  
Ewa Zimnoch-Guzowska
Keyword(s):  
Dna Markers ◽  
Somatic Hybrids ◽  
Genetic Composition ◽  
Cytoplasmic Dna

scholarly journals Germplasm Conservation: Instrumental in Agricultural Biodiversity—A Review

2021 ◽  
Vol 13 (12) ◽  
pp. 6743
Author(s):  
Veerala Priyanka ◽  
Rahul Kumar ◽  
Inderpreet Dhaliwal ◽  
Prashant Kaushik
Keyword(s):  
Plant Species ◽  
Agricultural Production ◽  
Genetic Instability ◽  
Slow Growth ◽  
Germplasm Conservation ◽  
Agricultural Biodiversity ◽  
Genetic Composition ◽  
In Vitro Techniques ◽  
Protection Strategies

Germplasm is a valuable natural resource that provides knowledge about the genetic composition of a species and is crucial for conserving plant diversity. Germplasm protection strategies not only involve rescuing plant species threatened with extinction, but also help preserve all essential plants, on which rests the survival of all organisms. The successful use of genetic resources necessitates their diligent collection, storage, analysis, documentation, and exchange. Slow growth cultures, cryopreservation, pollen and DNA banks, botanical gardens, genetic reserves, and farmers’ fields are a few germplasm conservation techniques being employed. However, the adoption of in-vitro techniques with any chance of genetic instability could lead to the destruction of the entire substance, but the improved understanding of basic regeneration biology would, in turn, undoubtedly increase the capacity to regenerate new plants, thus expanding selection possibilities. Germplasm conservation seeks to conserve endangered and vulnerable plant species worldwide for future proliferation and development; it is also the bedrock of agricultural production.

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