scholarly journals Faculty Opinions recommendation of Passive eDNA collection enhances aquatic biodiversity analysis.

Author(s):  
Baruch Rinkevich
2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Cindy Bessey ◽  
Simon Neil Jarman ◽  
Tiffany Simpson ◽  
Haylea Miller ◽  
Todd Stewart ◽  
...  

A Correction to this paper has been published: https://doi.org/10.1038/s42003-021-01994-6


2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Cindy Bessey ◽  
Simon Neil Jarman ◽  
Tiffany Simpson ◽  
Haylea Miller ◽  
Todd Stewart ◽  
...  

AbstractEnvironmental DNA (eDNA) metabarcoding is a sensitive and widely used approach for species detection and biodiversity assessment. The most common eDNA collection method in aquatic systems is actively filtering water through a membrane, which is time consuming and requires specialized equipment. Ecological studies investigating species abundance or distribution often require more samples than can be practically collected with current filtration methods. Here we demonstrate how eDNA can be passively collected in both tropical and temperate marine systems by directly submerging filter membranes (positively charged nylon and non-charged cellulose ester) in the water column. Using a universal fish metabarcoding assay, we show that passive eDNA collection can detect fish as effectively as active eDNA filtration methods in temperate systems and can also provide similar estimates of total fish biodiversity. Furthermore, passive eDNA collection enables greater levels of biological sampling, which increases the range of ecological questions that eDNA metabarcoding can address.


2021 ◽  
Author(s):  
Simone Guareschi ◽  
Alex Laini ◽  
Judy England ◽  
Jon Barrett ◽  
Paul J Wood
Keyword(s):  

Water ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 265
Author(s):  
Akarath Soukhaphon ◽  
Ian G. Baird ◽  
Zeb S. Hogan

The Mekong River, well known for its aquatic biodiversity, is important to the social, physical, and economic health of millions living in China, Myanmar, Laos, Thailand, Cambodia, and Vietnam. This paper explores the social and environmental impacts of several Mekong basin hydropower dams and groupings of dams and the geographies of their impacts. Specifically, we examined the 3S (Sesan, Sekong Srepok) river system in northeastern Cambodia, the Central Highlands of Vietnam, and southern Laos; the Khone Falls area in southern Laos; the lower Mun River Basin in northeastern Thailand; and the upper Mekong River in Yunnan Province, China, northeastern Myanmar, northern Laos, and northern Thailand. Evidence shows that these dams and groupings of dams are affecting fish migrations, river hydrology, and sediment transfers. Such changes are negatively impacting riparian communities up to 1000 km away. Because many communities depend on the river and its resources for their food and livelihood, changes to the river have impacted, and will continue to negatively impact, food and economic security. While social and environmental impact assessments have been carried out for these projects, greater consideration of the scale and cumulative impacts of dams is necessary.


Diversity ◽  
2021 ◽  
Vol 13 (3) ◽  
pp. 112
Author(s):  
Eftychia Tzafesta ◽  
Francesco Zangaro ◽  
Valeria Specchia ◽  
Maurizio Pinna

The loss of aquatic biodiversity is increasing at a rapid rate globally. There is a worldwide effort to protect, preserve and restore aquatic ecosystems. For efficient biodiversity monitoring and reliable management tools, comprehensive biodiversity data are required. The abundance and species diversity of benthic macroinvertebrates are commonly used as indicators of the aquatic ecosystem condition. Currently, macroinvertebrate species biodiversity assessment is based on morpho-taxonomy, which could be enhanced by recent advances in DNA-based tools for species identification. In particular, DNA metabarcoding has the potential to identify simultaneously many different taxa in a pool of species and to improve aquatic biomonitoring significantly, especially for indicator species. This review is focused on the current state of DNA-based aquatic biomonitoring using benthic macroinvertebrates in the Mediterranean region.


1996 ◽  
Vol 20 (6) ◽  
pp. 887-895 ◽  
Author(s):  
Mary E. Power ◽  
William E. Dietrich ◽  
Jacques C. Finlay

2008 ◽  
Vol 68 (4 suppl) ◽  
pp. 967-981 ◽  
Author(s):  
FA. Esteves ◽  
A. Caliman ◽  
JM. Santangelo ◽  
RD. Guariento ◽  
VF. Farjalla ◽  
...  

Neotropical coastal lagoons (NCL) are human-dominated ecosystems. Their distribution along densely populated coastal areas of developing countries makes these systems among the most threatened in the world. Here, we summarize some aspects of the causes and consequences of NCL biodiversity, their functioning, their importance to the surrounding populations, their fragility, and their responses to local and global anthropogenic impacts and the challenges that Neotropical countries face in conserving these systems. Although still scarce and geographically concentrated, a growing body of studies has shown that NCLs are physiographically diversified systems, which harbor a considerable and particular proportion of the Neotropical inland aquatic biodiversity. Despite the fact that coastal lagoons are ecotones that are intricately connected to surrounding environments, they develop mechanisms for structural and functional regulation, which confer to these systems higher productivity and carrying capacities than surrounding ecosystems. Such traits attract residential developments and subsidize local traditional populations with important economic and aesthetic ecosystem revenues such as fisheries and scenic beauty. However, the disorganized human occupation around NCLs are causing profound impacts such as eutrophication, salinization, exotic species introduction, as well as other effects, which are ultimately imposing major habitat degradations and biodiversity extirpations in NCLs. We argue that interdisciplinary conservation strategies, which integrate scientific expertise, government officials, private companies and the general public, are the most likely to overcome the geographic and economic obstacles to NCL conservation.


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