Detection of Full Length Hb S Gene (1.2 Kb) in One- and Two-cell Embryo Originated from Hamster Oocyte and Human Spermatozoa by Using Nested-PCR

2006 ◽  
Vol 6 (6) ◽  
pp. 1015-1020
Author(s):  
Bahy A. Ali ◽  
Halima H. Salem . ◽  
Tian H. Huang . ◽  
Qing D. Xie .
2018 ◽  
Vol 7 (22) ◽  
Author(s):  
Kai Li ◽  
Hao Li ◽  
Zhen Bi ◽  
Jun Gu ◽  
Wang Gong ◽  
...  

The full-length genome sequence of a novel swine acute diarrhea syndrome coronavirus (SADS-CoV), CH/FJWT/2018, was determined, which was genetically most closely related to CN/GDWT/2017, recently discovered in Fujian, China. The indel sites of the spike (S) gene of CH/FJWT/2018 were most similar to those of bat-origin SADS-related coronaviruses.


Author(s):  
D. Labie ◽  
J. Pagnier ◽  
H. Wajcman ◽  
M. E. Fabry ◽  
R.L. Nagel

2001 ◽  
Vol 39 (3) ◽  
pp. 1036-1041 ◽  
Author(s):  
M. J. Naylor ◽  
G. A. Harrison ◽  
R. P. Monckton ◽  
S. McOrist ◽  
P. R. Lehrbach ◽  
...  

2021 ◽  
Author(s):  
Eun-Mi Kim ◽  
Hyung-Chul Cho ◽  
Seung-Uk Shin ◽  
Jinho Park ◽  
Kyoung-Seong Choi

Abstract Bovine coronavirus (BCoV) is associated with severe diarrhea in calves, winter dysentery in adult cattle, and respiratory diseases in cattle. However, there is limited information regarding its molecular characterization in the Republic of Korea (KOR). This study was conducted to investigate the prevalence of BCoV in diarrheic calves, perform global comparison of BCoV genome sequences, and suggest a new nomenclature. A total of 521 fecal samples were collected from diarrheic pre-weaned native Korean calves (age £60 days) from 100 herds in the KOR. The samples were divided into three groups based on age as follows: 1-21 days (n = 433), 21-40 days (n = 64), and 41-60 days (n = 24). The full-length Spike (S) gene was amplified and sequenced. The phylogenetic tree was constructed using the maximum-likelihood method and the evolutionary rates were estimated. BCoV infection was detected in 20 (3.8%) calves by real-time RT-PCR analysis, and nine full-length genome sequences were obtained from the 20 BCoV-positive samples. Genomic comparison analysis showed that these 2019-2020 variants exhibited the highest nucleotide sequence identity (98.6%-99.2%) with that of water deer (Hydropotes inermis) isolates. Phylogenetic analysis of the full genomes of the S gene revealed the following four BCoV groups: G1, classical BCoV strains; G2, 2002 Korean, Japan, Vietnam, Cuba, and USA strains/isolates; G3, European strains/isolates; and G4, Korean isolates (2004 and 2006 Korean isolates, 2010 BCoV-like, 2017 water deer, and 2019-2020 variants). The evolutionary rates accelerated from G1 to G4. This grouping was also closely related to the nucleotide substitution rate. Using molecular clock analysis of the S gene, the most recent common ancestor of each group was estimated to have originated in 1953, 1979, 1986, and 1993, respectively. Recently identified BCoV variants in the KOR are undergoing slow evolution. These findings provide useful information for understanding the molecular characterization of BCoVs. Further research is necessary to conduct recombination analysis to support BCoV evolution.


Biologia ◽  
2017 ◽  
Vol 72 (12) ◽  
Author(s):  
Xiao-Wei Zhang ◽  
Qing Wang ◽  
Ling-Ling Zhang ◽  
Xiao-Juan Zhong ◽  
Qian-Tao Jiang ◽  
...  

AbstractADP-glucose pyrophosphorylase (AGP) consists of two large (AGP-L) and two small (AGP-S) subunits; it regulates the limiting step in the biosynthesis of starch. Here, we isolated the full-length cDNA sequence of the AGP-S gene (designed as


Blood ◽  
2014 ◽  
Vol 124 (21) ◽  
pp. 1389-1389
Author(s):  
Thomas Adamkiewicz ◽  
Fred Piel

Abstract Newborn screening (NBS) for hemoglobinopathies was first introduced in the 1970's to prevent infectious complications of homozygous sickle cell disease (hemoglobin [Hb] SS). The frequency of HbSS in newborns can be estimated using carrier rates (heterogygotes), assuming Hardy Weinberg Equilibrium (HWE). The current study examined whether NBS cohorts matched expected HWE distribution, and possible reasons for divergence. For the purpose of this study, all variants other than HbS were considered to be HbA. A total of 82 studies (1956 to 2013) were retrieved, of which 7 were excluded (carrier parents selected or screening sickle test used). Distribution of Hb SS, AS and AA was examined in 75 studies, from the following regions: Sub Saharan Africa n=26, Brazil n=12, USA n=12, EU n=10; Middle East/North Africa n=7, Caribbean n=6, India n=1, Canada n=1. The following screening laboratory methods were used: cellulose acetate electrophoresis (n=22), isoelectric focusing (n=21), high performance liquid chromatography (n=16), filter paper or micro column (n=7), other (n=9). A total of16,377,450 newborns or infants were included. In mixed random models, relative risk (RR) of detecting HbSS compared to expected HWE distribution was 2.06 (95% confidence interval [CI] 1.86, 3.66), p<0.001. In cohorts where HbAS carrier rates was >= 15%, RR was 1.44 (95% CI 1.23, 1.70), p=0.005; if carrier rates were between >=5% and <15%, RR was 1.62 (95% CI 1.20, 2.19), p=0.004; if carrier rates were <5%, RR was 5.74 (95% CI 3.4, 9.78), p<0.001. Thirteen studies provided data by subgroup: place of origin, ethnicity or race. Affected individuals were more likely to cluster in studies with lower HbS gene frequency (figure 1). Conversely, HbSS RR observed compared to expected HWE distribution was highest in populations with lowest overall gene frequency (figure 2). Overall RR for detecting HbAS compared to expected was 0.96 (95% CI 95, 97) p<0.001. Controlling for gene frequency, the Caribbean region was least likely to deviate from the expected HWE distribution, compared to other regions (RR 1.05, 95% CI 1.01, 1.05, P=0.007); cellulose acetate electrophoresis based methods were most likely to deviate from expected HWE distribution, compared to other methods (RR 0.97, 95%CI 0.95, 0.100, p=0.038). Deviation from HWE is commonly observed in NBS cohorts. It is an expected finding when smaller populations (e.g.migration) carrying a gene, exist within a larger population less affected with the same gene. However, even when controlling for gene frequency, regional variations were noted. Reasons may include further variations in population homogeneity, non-random mating within smaller groups (consanguinity), variations in hemoglobin variant distribution (alpha, beta thalassemia, fetal hemoglobin expression). Lab methods may also affect agreement with HWE distribution, as correct classification of non-affected individuals may vary between methods (normal homozygotes, variants and carriers). Divergence from HWE, especially when observed HbSS occurrence is less than expected, or when population Hb S gene distribution is known, may serve as a rapid and inexpensive quality control measure. Further examination of possible reasons for HWE deviation and caution when estimating burden of disease using carrier rates derived from NBS cohorts appear warranted. Figure 1: Distribution of the hemoglobin (Hb) S gene within a population in studies that provided data on subgroups, depending on Hb S gene frequency. Figure 1:. Distribution of the hemoglobin (Hb) S gene within a population in studies that provided data on subgroups, depending on Hb S gene frequency. Figure 2: Relative Risk (RR) of observing Hb SS compared to expected HWE. Diagonal line on left indicate a hypothetical population with a Hb AS carrier rate of 5% that is gradually diluted into a homozygote Hb AA population; diagonal line of right represents a similar hypothetical population with a Hb AS carrier rate of 30%. Figure 2:. Relative Risk (RR) of observing Hb SS compared to expected HWE. Diagonal line on left indicate a hypothetical population with a Hb AS carrier rate of 5% that is gradually diluted into a homozygote Hb AA population; diagonal line of right represents a similar hypothetical population with a Hb AS carrier rate of 30%. Disclosures No relevant conflicts of interest to declare.


Author(s):  
C. Barros ◽  
J. González ◽  
E. Herrera ◽  
E. Bustos-Obregón

Zona-free mammalian oocytes have been observed to fuse, under in vitro conditions, With non-homologous spermatozoa. Taking advantage of this heterologous gamete fusion, we designed a bioassay to test -by means of zona-free hamster oocytes- the fertile ability of human spermatozoa, from semen samples of patients attending an Infertility Clinic. To further validate our bioassay, which Was reported elsewhere, we studied the behavior of gamete membranes during fusion at the ultrastructural level.Zona-free hamster oocytes were mixed in vitro with human spermatozoa. At different times after the start of incubation, oocytes were fixed in 1% glutaraldehyde in 0. 25M cacodylate buffer pH 7. A and post-fixed in 196 osmium tetroxide. After dehydration in acetone, they were embedded in a low viscosity epoxy resin. Ultrathin sections were stained with uranyl acetate and lead citrate and examined with a Phillips 300 electron microscope.


2001 ◽  
Vol 76 (3) ◽  
pp. S202
Author(s):  
D.C Sprague ◽  
P.G Conley ◽  
M.L Brown ◽  
A.R Ficht ◽  
T.J Kuehl

Sign in / Sign up

Export Citation Format

Share Document