scholarly journals Coupling bioturbation activity to metal (Fe and Mn) profiles in situ

2013 ◽  
Vol 10 (4) ◽  
pp. 2365-2378 ◽  
Author(s):  
L. R. Teal ◽  
E. R. Parker ◽  
M. Solan

Abstract. The relative contributions that species assemblages, abiotic variables, and their interactions with one another make to ecosystem properties are recognised but are seldom considered simultaneously, within context, and at the appropriate spatio-temporal scales. Here, we combine fluorescent time-lapse sediment profile imaging (f-SPI) and diffusion gradient thin gels (DGT) to examine, in situ, the link between an important benthic ecosystem process (bioturbation) and the availability (profiles) of Fe and Mn. Whilst the combination of these methodologies (fg-SPI) was successful in gathering high-resolution in situ data of bioturbation activity and Fe/Mn profiles simultaneously, we show that the mechanistic basis of how the infaunal community mediate Fe and Mn is difficult to reconcile because of the spatio-temporal differences between particle and porewater mixing. This mismatch means that the consideration of these mechanistic processes in isolation is likely to limit our interpretative capacity of how infaunal communities mediate various biogeochemical processes in the natural environment. Moreover, the combination of multiple technologies, process based simulation modelling and generalised additive statistical modelling achieved here, emphasises the importance of simultaneously considering additional factors that influence benthic chemistry, in particular bioirrigation and tidal flushing of the sediment profile. Our findings highlight a pressing need to determine how the relative importance of multiple abiotic and biotic factors act in concert to alter major biogeochemical pathways across a variety of contexts and habitats.

2012 ◽  
Vol 9 (7) ◽  
pp. 8541-8570
Author(s):  
L. R. Teal ◽  
E. R. Parker ◽  
M. Solan

Abstract. The relative contributions that species assemblages, abiotic variables, and their interactions with one another, make to ecosystem properties are recognised but are seldom considered simultaneously, within context, and at the appropriate spatio-temporal scales. Here, we combine fluorescent time-lapse sediment profile imaging (f-SPI) and diffusion gradient thin gels (DGT) to examine, in situ, the link between an important benthic ecosystem process (bioturbation) and ecosystem functioning (trace metal cycling). We show that the mechanistic basis of how the infaunal community mediate Fe and Mn cycles is difficult to reconcile because of the spatio-temporal differences between particle and porewater mixing. This mismatch means that the consideration of these mechanistic processes in isolation is likely to limit our interpretative capacity of how infaunal communities mediate various biogeochemical processes in the natural environment. Moreover, the combination of multiple technologies, process based simulation modelling and generalised additive statistical modelling achieved here, emphasises the importance of simultaneously considering additional factors that influence benthic chemistry, in particular bioirrigation and tidal flushing of the sediment profile. Our findings highlight a pressing need to determine how the relative importance of multiple abiotic and biotic factors act in concert to alter major biogeochemical pathways across a variety of contexts and habitats.


2021 ◽  
Author(s):  
Rory Scarrott ◽  
Fiona Cawkwell ◽  
Mark Jessopp ◽  
Caroline Cusack

<p>The Ocean-surface Heterogeneity MApping (OHMA) algorithm is an objective, replicable approach to map the spatio-temporal heterogeneity of ocean surface waters. It is used to processes hypertemporal, satellite-derived data and produces a single-image surface heterogeneity (SH) dataset for the selected parameter of interest. The product separates regions of dissimilar temporal characteristics. Data validation is challenging because it requires In-situ observations at spatial and temporal resolutions comparable to the hyper-temporal inputs. Validating this spatio-temporal product highlighted the need to optimise existing vessel-based data collection efforts, to maximise exploitation of the rapidly-growing hyper-temporal data resource.</p><p>For this study, the SH was created using hyper-temporal 1km resolution satellite derived Sea Surface Temperature (SST) data acquired in 2011. Underway ship observations of near surface temperature collected on multiple scientific surveys off the Irish coast in 2011 were used to validate the results. The most suitable underway ship SST data were identified in ocean areas sampled multiple times and with representative measurements across all seasons.</p><p>A 3-stage bias reduction approach was applied to identify suitable ocean areas. The first bias reduction addressed temporal bias, i.e., the temporal spread of available In-situ ship transect data across each satellite image pixel. Only pixels for which In-situ data were obtained at least once in each season were selected; resulting in 14 SH image pixels deemed suitable out of a total of 3,677 SH image pixels with available In-situ data. The second bias reduction addressed spatial bias, to reduce the influence of over-sampled areas in an image pixel with a sub-pixel approach. Statistical dispersion measures and statistical shape measures were calculated for each of the sets of sub-pixel values. This gave heterogeneity estimates for each cruise transit of a pixel area. The third bias reduction addressed bias of temporally oversampled seasons. For each transit-derived heterogeneity measure, the values within each season were averaged, before the annual average value was derived across all four seasons in 2011.</p><p>Significant associations were identified between satellite SST-derived SH values, and In-situ heterogeneity measures related to shape; absolute skewness (Spearman’s Rank, n=14, ρ[12]= +0.5755, P<0.05), and kurtosis (Spearman’s Rank, n=14, ρ[12] = 0.5446, P < 0.05). These are a consequence of (i) locally-extreme measurements, and/or (ii) increased presence of sharp transitions detected spatially by In-situ data. However, the number and location of suitable In-situ validation sites precluded a robust validation of the SH dataset (14 pixels located in Irish waters, for a dataset spanning the North Atlantic). This requires more targeted data. The approach would have benefited from more samples over the winter season, which would have enabled more offshore validation sites to be incorporated into the analysis. This is a challenge that faces satellite product developers, who want to deliver spatio-temporal information to new markets. There is a significant opportunity for dedicated, transit-measured (e.g. Ferry box data), validation sites to be established. These could potentially synergise with key nodes in global shipping routes to maximise data collected by vessels of opportunity, and ensure consistent data are collected over the same area at regular intervals.</p>


2020 ◽  
Vol 13 (1) ◽  
pp. 1-12
Author(s):  
A. Afonin ◽  
B. Kopzhassarov ◽  
E. Milyutina ◽  
E. Kazakov ◽  
A. Sarbassova ◽  
...  

SummaryA prototype for pest development stages forecasting is developed in Kazakhstan exploiting data from the geoinformation technologies and using codling moth as a model pest in apples. The basic methodology involved operational thermal map retrieving based on MODIS land surface temperature products and weather stations data, their recalculation into accumulated degree days maps and then into maps of the phases of the codling moth population dynamics. The validation of the predicted dates of the development stages according to the in-situ data gathered in the apple orchards showed a good predictivity of the forecast maps. Predictivity of the prototype can be improved by using daily satellite sensor datasets and their calibration with data received from a network of weather stations installed in the orchards.


2021 ◽  
Author(s):  
Aqeel Piracha ◽  
Antonio Turiel ◽  
Estrella Olmedo ◽  
Marcos Portabella

<p>Traditional estimates of convection/water mass formation at the sea surface rely on measurements of air-sea fluxes of heat and freshwater<br>(evaporation minus precipitation), that are estimated by combining in-situ data with meteorological modelisation. Satellite-based estimates of ocean convection are thus largely impacted by the relatively high uncertainties and low space-time resolution of those fluxes. However, direct satellite measurements of the ocean surface offer a unique opportunity to study convection (upwelling, downwelling) events with unprecedented spatio-temporal resolution compared to in-situ measurements. In this work, we propose an alternative approach to the traditional framework for estimating ocean convection using satellites. Instead of combining high-resolution ocean data of sea surface temperature and salinity with the much less precise, less resolved air-sea interaction data, we estimate the air-sea fluxes by computing the material derivatives (using satellite ocean currents) of the satellite sea surface variables. We therefore obtain estimates at the same resolution of the satellite products, and with much better accuracy than what was estimated before. We present some examples of application in the Atlantic ocean and in the Mediterranean sea. Future directions of this work is the study of the seasonal and interannual variability of ocean convection, and the potential changes on deep convection associated to climate variability at different time scales.</p>


2009 ◽  
Vol 18 (5) ◽  
pp. 517 ◽  
Author(s):  
Ahmet Emre Tekeli ◽  
İbrahim Sönmez ◽  
Erdem Erdi ◽  
Fatih Demir

Fire detection and monitoring are challenging tasks that require continuous, early and quick responses that are as accurate as possible. Satellite-based systems are indispensable tools for operational and research agencies to accomplish such a demanding task. The frequent and continuous imagery capability of the geostationary satellites makes them the best candidate for early fire detection systems. The main purpose of the present paper is to analyze the spatio-temporal distribution of active fire monitoring (FIR) products of the European Organization for the Exploitation of Meteorological Satellites (EUMETSAT)’s Meteosat Second Generation (MSG) satellite with in situ data for the summer of 2006 over Turkey. In situ data were obtained from the fire reports of the Ministry of Environment and Forestry, Turkey. The main shortcomings of the MSG active fire monitoring product validation arise from the pixel resolution and fire coverage, which are examined on the basis of some recent examples. The diurnal cycle of active fires identified well with the product. The burnt area effects on the accuracy of hit ratios were also analyzed. It is seen that the possibility for the fire to be detected by MSG increases with increasing burnt area. Even with the present anomalies, remote sensing may provide a consistent systematic way of monitoring fires, removing human biases and enabling a long-term dataset, which has been a goal of Global Observation of Forest and Land Cover Dynamics (GOFC/GOLD).


2021 ◽  
Vol 13 (9) ◽  
pp. 1748
Author(s):  
Asmaa Abdelbaki ◽  
Martin Schlerf ◽  
Rebecca Retzlaff ◽  
Miriam Machwitz ◽  
Jochem Verrelst ◽  
...  

Hyperspectral cameras onboard unmanned aerial vehicles (UAVs) have recently emerged for monitoring crop traits at the sub-field scale. Different physical, statistical, and hybrid methods for crop trait retrieval have been developed. However, spectra collected from UAVs can be confounded by various issues, including illumination variation throughout the crop growing season, the effect of which on the retrieval performance is not well understood at present. In this study, four retrieval methods are compared, in terms of retrieving the leaf area index (LAI), fractional vegetation cover (fCover), and canopy chlorophyll content (CCC) of potato plants over an agricultural field for six dates during the growing season. We analyzed: (1) The standard look-up table method (LUTstd), (2) an improved (regularized) LUT method that involves variable correlation (LUTreg), (3) hybrid methods, and (4) random forest regression without (RF) and with (RFexp) the exposure time as an additional explanatory variable. The Soil–Leaf–Canopy (SLC) model was used in association with the LUT-based inversion and hybrid methods, while the statistical modelling methods (RF and RFexp) relied entirely on in situ data. The results revealed that RFexp was the best-performing method, yielding the highest accuracies, in terms of the normalized root mean square error (NRMSE), for LAI (5.36%), fCover (5.87%), and CCC (15.01%). RFexp was able to reduce the effects of illumination variability and cloud shadows. LUTreg outperformed the other two retrieval methods (hybrid methods and LUTstd), with an NRMSE of 9.18% for LAI, 10.46% for fCover, and 12.16% for CCC. Conversely, LUTreg led to lower accuracies than those derived from RF for LAI (5.51%) and for fCover (6.23%), but not for CCC (16.21%). Therefore, the machine learning approaches—in particular, RF—appear to be the most promising retrieval methods for application to UAV-based hyperspectral data.


2021 ◽  
Author(s):  
Hugo Fagundes ◽  
Fernando Fan ◽  
Rodrigo Paiva ◽  
Vinicius Siqueira ◽  
Diogo Buarque ◽  
...  

<p>Suspended sediments (SS) have an important role in the maintenance of several ecosystems by supplying them with nutrients. On the other hand, erosion and sediment transport can carry pollutants and pesticides, contributing to the negative impacts on the aquatic biota. Besides that, sediment supply for the rivers is often a driver to geomorphologic changes occurring in the rivers. Erosion and sediment rates in South America are considerably high in comparison to northern continents in the world. In this study we modeled the natural (non affected by reservoirs) spatio-temporal dynamic of suspended sediments in South America, including deposition rates in floodplain areas, using the sediment continental model MGB-SED SA. The model performance was evaluated aga inst 595 in-situ stations; 80 sites using results from regional studies; and 51 sites using results from a global sediment model. For most places, model performance analysis shows a better agreement between simulated and observed (in-situ) data than when results were compared to regional studies and a global model data. A better representation of sediment flow in rivers and floodplains was possible due to the use of hydrodynamic river routing. Based on MGB-SED SA estimates, South America delivers to the oceans 1.00×10<sup>9</sup> t/year of SS. The bigger suppliers are the Amazon (4.36×10<sup>8</sup> t/year), Orinoco (1.37×10<sup>8</sup> t/year), La Plata (1.11×10<sup>8</sup> t/year), and Magdalena (3.26×10<sup>7</sup>) rivers. Around 12% (2.40×10<sup>8</sup> t/year) of SS loads reaching the rivers are stored in the floodplains, showing the importance of these regions.  </p>


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