scholarly journals Silicon uptake and isotope fractionation dynamics by crop species

2020 ◽  
Vol 17 (24) ◽  
pp. 6475-6490
Author(s):  
Daniel A. Frick ◽  
Rainer Remus ◽  
Michael Sommer ◽  
Jürgen Augustin ◽  
Danuta Kaczorek ◽  
...  

Abstract. That silicon is an important element in global biogeochemical cycles is widely recognised. Recently, its relevance for global crop production has gained increasing attention in light of possible deficits in plant-available Si in soil. Silicon is beneficial for plant growth and is taken up in considerable amounts by crops like rice or wheat. However, plants differ in the way they take up silicic acid from soil solution, with some species rejecting silicic acid while others actively incorporate it. Yet because the processes governing Si uptake and regulation are not fully understood, these classifications are subject to intense debate. To gain a new perspective on the processes involved, we investigated the dependence of silicon stable isotope fractionation on silicon uptake strategy, transpiration, water use, and Si transfer efficiency. Crop plants with rejective (tomato, Solanum lycopersicum, and mustard, Sinapis alba) and active (spring wheat, Triticum aestivum) Si uptake were hydroponically grown for 6 weeks. Using inductively coupled plasma mass spectrometry, the silicon concentration and isotopic composition of the nutrient solution, the roots, and the shoots were determined. We found that measured Si uptake does not correlate with the amount of transpired water and is thus distinct from Si incorporation expected for unspecific passive uptake. We interpret this lack of correlation to indicate a highly selective Si uptake mechanism. All three species preferentially incorporated light 28Si, with a fractionation factor 1000×ln (α) of −0.33 ‰ (tomato), −0.55 ‰ (mustard), and −0.43 ‰ (wheat) between growth medium and bulk plant. Thus, even though the rates of active and passive Si root uptake differ, the physico-chemical processes governing Si uptake and stable isotope fractionation do not. We suggest that isotope fractionation during root uptake is governed by a diffusion process. In contrast, the transport of silicic acid from the roots to the shoots depends on the amount of silicon previously precipitated in the roots and the presence of active transporters in the root endodermis, facilitating Si transport into the shoots. Plants with significant biogenic silica precipitation in roots (mustard and wheat) preferentially transport silicon depleted in 28Si into their shoots. If biogenic silica is not precipitated in the roots, Si transport is dominated by a diffusion process, and hence light silicon 28Si is preferentially transported into the tomato shoots. This stable Si isotope fingerprinting of the processes that transfer biogenic silica between the roots and shoots has the potential to track Si availability and recycling in soils and to provide a monitor for efficient use of plant-available Si in agricultural production.

2020 ◽  
Author(s):  
Daniel A. Frick ◽  
Rainer Remus ◽  
Michael Sommer ◽  
Jürgen Augustin ◽  
Friedhelm von Blanckenburg

Abstract. Silicon has been recognized an important element in global biogeochemical cycles for a long time. Recently, its relevance for global crop production gains increasing attention. Silicon is beneficial for plant growth and is taken up in considerable amounts by crops, likewise rice or wheat. The incorporation of silicic acid from the soil solution into the plants is accomplished by a variety of strategies (rejective, passive and active) that are subject to an intense debate. To forge a new perspective on the underlying processes, we investigated how the silicon stable isotope fractionation during plant growth depends on uptake strategy, transpiration, water use, and Si transfer efficiency. Crop plants with a rejective (tomato, Solanum lycopersicum and mustard, Sinapis alba) and active (spring wheat, Triticum aestivum) uptake were hydroponically grown for 6 weeks. Using inductively coupled plasma mass spectrometry, the silicon amounts and the isotopic composition of the nutrient solution, the roots, and the shoots were determined. Wheat revealed the highest Si transfer efficiency from root to shoot followed by tomato and mustard. All three species preferentially incorporated light 28Si, with a fractionation factor 1000∙ln(α) of −0.33 ‰ (tomato), −0.55 ‰ (mustard) and −0.43 ‰ (wheat). Even though the rates of active and passive Si root uptake differ, the physico-chemical processes governing Si uptake and stable isotope fractionation do not, they are governed by a diffusion process. In contrast, the transport of silicic acid from the roots to the shoots depends on the preceding precipitation of silicic acid in the roots and the presence of active transporters at the root endodermis. Plants with a significant biogenic silica precipitation in roots (mustard, and wheat), preferentially transport silicon enriched in 30Si into their shoots, whereas the transport in tomato is governed by a diffusion process and hence preferentially transports light silicon 28Si into the shoots.


2004 ◽  
Vol 70 (5) ◽  
pp. 2935-2940 ◽  
Author(s):  
Barbara Morasch ◽  
Hans H. Richnow ◽  
Andrea Vieth ◽  
Bernhard Schink ◽  
Rainer U. Meckenstock

ABSTRACT Stable isotope fractionation was studied during the degradation of m-xylene, o-xylene, m-cresol, and p-cresol with two pure cultures of sulfate-reducing bacteria. Degradation of all four compounds is initiated by a fumarate addition reaction by a glycyl radical enzyme, analogous to the well-studied benzylsuccinate synthase reaction in toluene degradation. The extent of stable carbon isotope fractionation caused by these radical-type reactions was between enrichment factors (ε) of −1.5 and −3.9, which is in the same order of magnitude as data provided before for anaerobic toluene degradation. Based on our results, an analysis of isotope fractionation should be applicable for the evaluation of in situ bioremediation of all contaminants degraded by glycyl radical enzyme mechanisms that are smaller than 14 carbon atoms. In order to compare carbon isotope fractionations upon the degradation of various substrates whose numbers of carbon atoms differ, intrinsic ε (εintrinsic) were calculated. A comparison of εintrinsic at the single carbon atoms of the molecule where the benzylsuccinate synthase reaction took place with compound-specific ε elucidated that both varied on average to the same extent. Despite variations during the degradation of different substrates, the range of ε found for glycyl radical reactions was reasonably narrow to propose that rough estimates of biodegradation in situ might be given by using an average ε if no fractionation factor is available for single compounds.


2021 ◽  
Author(s):  
Andrea Watzinger ◽  
Melanie Hager ◽  
Thomas Reichenauer ◽  
Gerhard Soja ◽  
Paul Kinner

AbstractMaintaining and supporting complete biodegradation during remediation of petroleum hydrocarbon contaminated groundwater in constructed wetlands is vital for the final destruction and removal of contaminants. We aimed to compare and gain insight into biodegradation and explore possible limitations in different filter materials (sand, sand amended with biochar, expanded clay). These filters were collected from constructed wetlands after two years of operation and batch experiments were conducted using two stable isotope techniques; (i) carbon isotope labelling of hexadecane and (ii) hydrogen isotope fractionation of decane. Both hydrocarbon compounds hexadecane and decane were biodegraded. The mineralization rate of hexadecane was higher in the sandy filter material (3.6 µg CO2 g−1 day−1) than in the expanded clay (1.0 µg CO2 g−1 day−1). The microbial community of the constructed wetland microcosms was dominated by Gram negative bacteria and fungi and was specific for the different filter materials while hexadecane was primarily anabolized by bacteria. Adsorption / desorption of petroleum hydrocarbons in expanded clay was observed, which might not hinder but delay biodegradation. Very few cases of hydrogen isotope fractionation were recorded in expanded clay and sand & biochar filters during decane biodegradation. In sand filters, decane was biodegraded more slowly and hydrogen isotope fractionation was visible. Still, the range of observed apparent kinetic hydrogen isotope effects (AKIEH = 1.072–1.500) and apparent decane biodegradation rates (k = − 0.017 to − 0.067 day−1) of the sand filter were low. To conclude, low biodegradation rates, small hydrogen isotope fractionation, zero order mineralization kinetics and lack of microbial biomass growth indicated that mass transfer controlled biodegradation.


Pedobiologia ◽  
2005 ◽  
Vol 49 (3) ◽  
pp. 229-237 ◽  
Author(s):  
Dominique Haubert ◽  
Reinhard Langel ◽  
Stefan Scheu ◽  
Liliane Ruess

2011 ◽  
Vol 75 (19) ◽  
pp. 5797-5818 ◽  
Author(s):  
F. Wombacher ◽  
A. Eisenhauer ◽  
F. Böhm ◽  
N. Gussone ◽  
M. Regenberg ◽  
...  

2016 ◽  
Vol 50 (11) ◽  
pp. 5729-5739 ◽  
Author(s):  
Heide K. V. Schürner ◽  
Michael P. Maier ◽  
Dominik Eckert ◽  
Ramona Brejcha ◽  
Claudia-Constanze Neumann ◽  
...  

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