scholarly journals Overlooked runaway feedback in the marine nitrogen cycle: the vicious cycle

2012 ◽  
Vol 9 (7) ◽  
pp. 8905-8930
Author(s):  
A. Landolfi ◽  
H. Dietze ◽  
W. Koeve ◽  
A. Oschlies
Keyword(s):  
Ocean Circulation ◽  
Nitrogen Loss ◽  
Spatial Association ◽  
Circulation Model ◽  
Spatial Proximity ◽  
N Losses ◽  
Sources And Sinks ◽  
Close Spatial Proximity ◽  
Individual Rate ◽  
Apparent Stability

Abstract. The marine nitrogen (N) inventory is controlled by the interplay of nitrogen loss processes, here referred to as denitrification, and nitrogen source processes, primarily nitrogen fixation. The apparent stability of the marine N inventory on time scales longer than the estimated N residence time, suggests some intimate balance between N sinks and sources. Such a balance may be perceived easier to achieve when N sinks and sources occur in close spatial proximity, and some studies have interpreted observational evidence for such a proximity as indication for a stabilizing feedback processes. Using a biogeochemical ocean circulation model, we here show instead that a close spatial association of N2 fixation and denitrification can, in fact, trigger destabilizing feedbacks on the N inventory and, because of stoichiometric constrains, lead to net N losses. Contrary to current notion, a balanced N inventory requires a regional separation of N sources and sinks. This can be brought about by factors that reduce the growth of diazotrophs, such as iron, or by factors that affect the fate of the fixed nitrogen remineralization, such as dissolved organic matter dynamics. In light of our findings we suggest that spatial arrangements of N sinks and sources have to be accounted for in addition to individual rate estimates for reconstructing past, evaluating present and predicting future marine N inventory imbalances.

scholarly journals Marine denitrification rates determined from a global 3-dimensional inverse model

2012 ◽  
Vol 9 (10) ◽  
pp. 14013-14052 ◽  
Author(s):  
T. DeVries ◽  
C. Deutsch ◽  
P. A. Rafter ◽  
F. Primeau
Keyword(s):  
Ocean Circulation ◽  
Isotopic Ratio ◽  
Circulation Model ◽  
Simple Relationship ◽  
N Losses ◽  
3 Dimensional ◽  
Global Rate ◽  
Nitrate Consumption ◽  
The Difference

Abstract. A major impediment to understanding long-term changes in the marine nitrogen (N) cycle is the persistent uncertainty about the rates, distribution, and sensitivity of its largest fluxes in the modern ocean. We use a global 3-dimensional ocean circulation model to obtain the first estimate of marine denitrification rates that is maximally consistent with available observations of nitrate deficits and the nitrogen isotopic ratio of ocean nitrate. We find a global rate of marine denitrification in suboxic waters and sediments of 120–240 Tg N yr−1, which is lower than most other recent estimates. The difference stems from the ability to represent the 3-D spatial structure of suboxic zones, where denitrification rates of 50–77 Tg N yr−1 result in up to 50% depletion of nitrate. This depletion reduces the effect of local isotopic enrichment on the rest of the ocean, allowing the N isotope ratio of oceanic nitrate to be achieved with a sedimentary denitrification rate about 1.3–2.3 times that of suboxic zones. This balance of N losses between sediments and suboxic zones is shown to obey a simple relationship between isotope fractionation and the degree of nitrate consumption in the core of the suboxic zones. The global denitrification rates derived here suggest that the marine nitrogen budget is likely close to balanced.

scholarly journals Overlooked runaway feedback in the marine nitrogen cycle: the vicious cycle

2013 ◽  
Vol 10 (3) ◽  
pp. 1351-1363 ◽  
Author(s):  
A. Landolfi ◽  
H. Dietze ◽  
W. Koeve ◽  
A. Oschlies
Keyword(s):  
Ocean Circulation ◽  
N2 Fixation ◽  
Spatial Association ◽  
Circulation Model ◽  
Vicious Cycle ◽  
N Loss ◽  
Model Experiments ◽  
Idealized Model ◽  
Negative Feedbacks ◽  
Additional Fixation

Abstract. The marine nitrogen (N) inventory is thought to be stabilized by negative feedback mechanisms that reduce N inventory excursions relative to the more slowly overturning phosphorus inventory. Using a global biogeochemical ocean circulation model we show that negative feedbacks stabilizing the N inventory cannot persist if a close spatial association of N2 fixation and denitrification occurs. In our idealized model experiments, nitrogen deficient waters, generated by denitrification, stimulate local N2 fixation activity. But, because of stoichiometric constraints, the denitrification of newly fixed nitrogen leads to a net loss of N. This can enhance the N deficit, thereby triggering additional fixation in a vicious cycle, ultimately leading to a runaway N loss. To break this vicious cycle, and allow for stabilizing negative feedbacks to occur, inputs of new N need to be spatially decoupled from denitrification. Our idealized model experiments suggest that factors such as iron limitation or dissolved organic matter cycling can promote such decoupling and allow for negative feedbacks that stabilize the N inventory. Conversely, close spatial co-location of N2 fixation and denitrification could lead to net N loss.

scholarly journals Marine denitrification rates determined from a global 3-D inverse model

2013 ◽  
Vol 10 (4) ◽  
pp. 2481-2496 ◽  
Author(s):  
T. DeVries ◽  
C. Deutsch ◽  
P. A. Rafter ◽  
F. Primeau
Keyword(s):  
Ocean Circulation ◽  
Isotopic Ratio ◽  
Circulation Model ◽  
Global Ocean ◽  
Simple Relationship ◽  
N Losses ◽  
Global Rate ◽  
Nitrate Consumption ◽  
The Difference ◽  
Global Ocean Circulation

Abstract. A major impediment to understanding long-term changes in the marine nitrogen (N) cycle is the persistent uncertainty about the rates, distribution, and sensitivity of its largest fluxes in the modern ocean. We use a global ocean circulation model to obtain the first 3-D estimate of marine denitrification rates that is maximally consistent with available observations of nitrate deficits and the nitrogen isotopic ratio of oceanic nitrate. We find a global rate of marine denitrification in suboxic waters and sediments of 120–240 Tg N yr−1, which is lower than many other recent estimates. The difference stems from the ability to represent the 3-D spatial structure of suboxic zones, where denitrification rates of 50–77 Tg N yr−1 result in up to 50% depletion of nitrate. This depletion reduces the effect of local isotopic enrichment on the rest of the ocean, allowing the N isotope ratio of oceanic nitrate to be achieved with a sedimentary denitrification rate about 1.3–2.3 times that of suboxic zones. This balance of N losses between sediments and suboxic zones is shown to obey a simple relationship between isotope fractionation and the degree of nitrate consumption in the core of the suboxic zones. The global denitrification rates derived here suggest that the marine nitrogen budget is likely close to balanced.

On the impact of sea ice in a global ocean circulation model

1997 ◽  
Vol 25 ◽  
pp. 111-115 ◽  
Author(s):  
Achim Stössel
Keyword(s):  
Southern Ocean ◽  
Sea Ice ◽  
Ocean Circulation ◽  
General Circulation ◽  
Thermohaline Circulation ◽  
Circulation Model ◽  
Deep Ocean ◽  
Global Ocean ◽  
Convective Activity ◽  
The Impact

This paper investigates the long-term impact of sea ice on global climate using a global sea-ice–ocean general circulation model (OGCM). The sea-ice component involves state-of-the-art dynamics; the ocean component consists of a 3.5° × 3.5° × 11 layer primitive-equation model. Depending on the physical description of sea ice, significant changes are detected in the convective activity, in the hydrographic properties and in the thermohaline circulation of the ocean model. Most of these changes originate in the Southern Ocean, emphasizing the crucial role of sea ice in this marginally stably stratified region of the world's oceans. Specifically, if the effect of brine release is neglected, the deep layers of the Southern Ocean warm up considerably; this is associated with a weakening of the Southern Hemisphere overturning cell. The removal of the commonly used “salinity enhancement” leads to a similar effect. The deep-ocean salinity is almost unaffected in both experiments. Introducing explicit new-ice thickness growth in partially ice-covered gridcells leads to a substantial increase in convective activity, especially in the Southern Ocean, with a concomitant significant cooling and salinification of the deep ocean. Possible mechanisms for the resulting interactions between sea-ice processes and deep-ocean characteristics are suggested.

scholarly journals Foliar Urea with N-(n-butyl) Thiophosphoric Triamide for Sustainable Yield and Quality of Pineapple in a Controlled Environment

2021 ◽  
Vol 13 (12) ◽  
pp. 6880
Author(s):  
Mohammad Amdadul Haque ◽  
Siti Zaharah Sakimin ◽  
Phebe Ding ◽  
Noraini Md. Jaafar ◽  
Mohd Khanif Yusop ◽  
...  
Keyword(s):  
Nitrogen Loss ◽  
Growth Yield ◽  
Fruit Weight ◽  
Soluble Solids ◽  
Urea Solution ◽  
Urease Inhibitor ◽  
N Losses ◽  
N Accumulation ◽  
Yield And Quality

In agricultural production, nitrogen loss leads to economic loss and is a high environmental risk affecting plant growth, yield, and quality. Use of the N fertilizer with a urease inhibitor is thus necessary to minimize N losses and increase the efficiency of N. This study aimed to evaluate the effects of N-(n-butyl) Thiophosphoric Triamide (NBPT) on the growth, yield, and quality of pineapple. The experiment involved two foliar fertilizer treatments: 1% (w/v) urea solution with NBPT (2.25 mL kg−1 urea) was treated as NLU (NBPT Liquid Urea), and the same concentration of urea without NBPT served as the control. Both were applied 12 times, starting 1 month after planting (MAP) and continuing once a month for 12 months. The application of urea with NBPT notably increased the above-ground dry biomass per plant (20% and 10% at 8 and 12 MAP, respectively), leaf area per plant (23% and 15% at 8 and 12 MAP, respectively), N accumulation per plant (10%), PFPN (Partial Factor Productivity) (13%), and average fruit weight (15%) compared to the treatment with urea alone (control). The analysis of quality parameters indicated that urea with NBPT improves TSS (Total Soluble Solids) (19%), ascorbic acid (10%), and sucrose (14%) but reduces the total organic acid content (21%) in pineapple. When using urea with a urease inhibitor (NBPT), there was a significant improvement in growth, yield, quality, and nitrogen use efficiency, with the additional benefit of reduced nitrogen losses, in combination with easy handling. Hence, urea with a urease inhibitor can be used as a viable alternative for increasing pineapple yield by boosting growth with better fruit quality.

scholarly journals Involvement of loop 5 lysine residues and the N-terminal β-hairpin of the ribotoxin hirsutellin A on its insecticidal activity

2016 ◽  
Vol 397 (2) ◽  
pp. 135-145 ◽  
Author(s):  
Miriam Olombrada ◽  
Lucía García-Ortega ◽  
Javier Lacadena ◽  
Mercedes Oñaderra ◽  
José G. Gavilanes ◽  
...  
Keyword(s):  
Active Sites ◽  
Structural Changes ◽  
The Other ◽  
Spatial Proximity ◽  
Ribonucleolytic Activity ◽  
The Family ◽  
Lysine Residues ◽  
Hirsutella Thompsonii ◽  
Close Spatial Proximity ◽  
High Degree

Abstract Ribotoxins are cytotoxic members of the family of fungal extracellular ribonucleases best represented by RNase T1. They share a high degree of sequence identity and a common structural fold, including the geometric arrangement of their active sites. However, ribotoxins are larger, with a well-defined N-terminal β-hairpin, and display longer and positively charged unstructured loops. These structural differences account for their cytotoxic properties. Unexpectedly, the discovery of hirsutellin A (HtA), a ribotoxin produced by the invertebrate pathogen Hirsutella thompsonii, showed how it was possible to accommodate these features into a shorter amino acid sequence. Examination of HtA N-terminal β-hairpin reveals differences in terms of length, charge, and spatial distribution. Consequently, four different HtA mutants were prepared and characterized. One of them was the result of deleting this hairpin [Δ(8-15)] while the other three affected single Lys residues in its close spatial proximity (K115E, K118E, and K123E). The results obtained support the general conclusion that HtA active site would show a high degree of plasticity, being able to accommodate electrostatic and structural changes not suitable for the other previously known larger ribotoxins, as the variants described here only presented small differences in terms of ribonucleolytic activity and cytotoxicity against cultured insect cells.

scholarly journals Impact of partial steps and momentum advection schemes in a global ocean circulation model at eddy-permitting resolution

2006 ◽  
Vol 56 (5-6) ◽  
pp. 543-567 ◽  
Author(s):  
Barnier Bernard ◽  
Gurvan Madec ◽  
Thierry Penduff ◽  
Jean-Marc Molines ◽  
Anne-Marie Treguier ◽  
...  
Keyword(s):  
Ocean Circulation ◽  
Circulation Model ◽  
Global Ocean ◽  
Ocean Circulation Model ◽  
Advection Schemes ◽  
Global Ocean Circulation

A Near-Uniform Basin-Wide Sea Level Fluctuation of the Mediterranean Sea

2007 ◽  
Vol 37 (2) ◽  
pp. 338-358 ◽  
Author(s):  
Ichiro Fukumori ◽  
Dimitris Menemenlis ◽  
Tong Lee
Keyword(s):  
Atlantic Ocean ◽  
Mediterranean Sea ◽  
Sea Level ◽  
Ocean Circulation ◽  
Large Scale ◽  
Circulation Model ◽  
Level Fluctuation ◽  
Strait Of Gibraltar ◽  
Sea Level Fluctuation ◽  
The Mediterranean

Abstract A new basin-wide oscillation of the Mediterranean Sea is identified and analyzed using sea level observations from the Ocean Topography Experiment (TOPEX)/Poseidon satellite altimeter and a numerical ocean circulation model. More than 50% of the large-scale, nontidal, and non-pressure-driven variance of sea level can be attributed to this oscillation, which is nearly uniform in phase and amplitude across the entire basin. The oscillation has periods ranging from 10 days to several years and has a magnitude as large as 10 cm. The model suggests that the fluctuations are driven by winds at the Strait of Gibraltar and its neighboring region, including the Alboran Sea and a part of the Atlantic Ocean immediately to the west of the strait. Winds in this region force a net mass flux through the Strait of Gibraltar to which the Mediterranean Sea adjusts almost uniformly across its entire basin with depth-independent pressure perturbations. The wind-driven response can be explained in part by wind setup; a near-stationary balance is established between the along-strait wind in this forcing region and the sea level difference between the Mediterranean Sea and the Atlantic Ocean. The amplitude of this basin-wide wind-driven sea level fluctuation is inversely proportional to the setup region’s depth but is insensitive to its width including that of Gibraltar Strait. The wind-driven fluctuation is coherent with atmospheric pressure over the basin and contributes to the apparent deviation of the Mediterranean Sea from an inverse barometer response.

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