Assessing the impacts of agricultural managements on soil carbon stocks, nitrogen loss and crop production — a modelling study in Eastern Africa

Improved agricultural management plays a vital role in protecting soils from degradation in Eastern Africa. Changing practices such as reducing tillage, fertilizer use or cover crops are expected to enhance soil organic carbon (SOC) storage, with climate change mitigation co-benefits, while increasing crop production. However, the quantification of cropland managements’ effects on agricultural ecosystems remains inadequate in this region. Here, we explored seven management practices and their potential effects on soil carbon (C) pools, nitrogen (N) losses, and crop yields under different climate scenarios, using the dynamic vegetation model LPJ-GUESS. The model performance is evaluated against observations from two long-term maize field trials in western Kenya and reported estimates from published sources. LPJ-GUESS generally produces soil C stocks and maize productivity comparable with measurements, and mostly captures the SOC decline under some management practices that is observed in the field experiments. We found that for large parts of Kenya and Ethiopia, an integrated conservation agriculture practice (no-tillage, residue and manure application, and cover crops) increases SOC levels in the long term (+11 % on average), accompanied by increased crop yields (+22 %) in comparison to the standard management. Planting nitrogen-fixing cover crops in our simulations is also identified as a promising individual practice in Eastern Africa to increase soil C storage (+4 %) and crop production (+18 %), with low environmental cost of N losses (+24 %). These management impacts are also sustained in simulations of three future climate pathways. This study highlights the possibilities of conservation agriculture when targeting long-term environmental sustainability and food security in crop ecosystems, particularly for those with poor soil conditions in tropical climates.

High Carbon Amendments Increase Nitrogen Retention in Soil After Slurry Application—an Incubation Study with Silty Loam Soil

Excess nitrogen (N) after animal slurry application is a persistent problem of intensive agriculture, with consequences such as environmental pollution by ammonia (NH3) and nitrous oxide (N2O) emissions and nitrate (NO3−) leaching. High-carbon organic soil amendments (HCAs) with a large C:N ratio have shown the potential of mitigating unintended N losses from soil. To reduce gaseous and leaching N losses after the application of slurry, a laboratory incubation study was conducted with silt loam soil. We tested the potential of three different types of HCA—wheat straw, sawdust, and leonardite (application rate 50 g C L−1 slurry for each of the three HCAs)—to mitigate N loss after amendment of soil with pig and cattle slurry using two common application modes (slurry and HCA mixed overnight with subsequent addition to soil vs. sequential addition) at an application rate equivalent to 80 kg N ha−1. Compared to the control with only soil and slurry, the addition of leonardite reduced the NH3 emissions of both slurries by 32–64%. Leonardite also reduced the total N2O emissions by 33–58%. Wheat straw reduced N2O emissions by 40–46%, but had no effect on NH3 emission. 15 N labeling showed that the application of leonardite was associated with the highest N retention in soil (24% average slurry N recovery), followed by wheat straw (20% average slurry N recovery). The mitigation of N loss was also observed for sawdust, although the effect was less consistent compared with leonardite and wheat straw. Mixing the slurry and HCA overnight tended to reduce N losses, although the effect was not consistent across all treatments. In conclusion, leonardite improved soil N retention more effectively than wheat straw and sawdust.

Ammonia-oxidizing bacterial communities are affected by nitrogen fertilization and grass species in native C4 grassland soils

Background Fertilizer addition can contribute to nitrogen (N) losses from soil by affecting microbial populations responsible for nitrification. However, the effects of N fertilization on ammonia oxidizing bacteria under C4 perennial grasses in nutrient-poor grasslands are not well studied. Methods In this study, a field experiment was used to assess the effects of N fertilization rate (0, 67, and 202 kg N ha−1) and grass species (switchgrass (Panicum virgatum) and big bluestem (Andropogon gerardii)) on ammonia-oxidizing bacterial (AOB) communities in C4 grassland soils using quantitative PCR, quantitative reverse transcription-PCR, and high-throughput amplicon sequencing of amoA genes. Results Nitrosospira were dominant AOB in the C4 grassland soil throughout the growing season. N fertilization rate had a stronger influence on AOB community composition than C4 grass species. Elevated N fertilizer application increased the abundance, activity, and alpha-diversity of AOB communities as well as nitrification potential, nitrous oxide (N2O) emission and soil acidity. The abundance and species richness of AOB were higher under switchgrass compared to big bluestem. Soil pH, nitrate, nitrification potential, and N2O emission were significantly related to the variability in AOB community structures (p < 0.05).

Soil Type Modifies the Impacts of Warming and Snow Exclusion on Carbon and Nutrient Losses

The varied and wide-reaching impacts of climate change are occurring across heterogeneous landscapes. Despite the known importance of soils in mediating biogeochemical nutrient cycling, there is little experimental evidence of how soil characteristics may shape ecosystem response to climate change. Our objective was to clarify how soil characteristics modify the impact of climate changes on carbon and nutrient leaching losses in temperate forests. We therefore conducted a field-based mesocosm experiment with replicated warming and snow exclusion treatments on two soils in large (2.4 m diameter), in-field forest sapling mesocosms. We found that nutrient loss responses to warming and snow exclusion treatments frequently varied substantially by soil type. Indeed, in some cases, soil type nullified the impact of a climate treatment. For example, warming and snow exclusion increased nitrogen (N) losses on fine soils by up to four times versus controls, but these treatments had no impact on coarse soils. Generally, the coarse textured soil, with its lower soil-water holding capacity, had higher nutrient losses (e.g., 12-17 times more total N loss from coarse than fine soils), except in the case of phosphate, which had consistently higher losses (23-58%) from the finer textured soil. Furthermore, the mitigation of nutrient loss by increasing tree biomass varied by soil type and nutrient. Our results suggest that potentially large biogeochemical responses to climate change are strongly mediated by soil characteristics, providing further evidence of the need to consider soil properties in Earth system models for improving nutrient cycling and climate projections.

Effects of Microencapsulated Methionine on Milk Production and Manure Nitrogen Excretions of Lactating Dairy Cows

The study objective was to determine the effects of rumen-protected methionine (Met) by microencapsulation (RPM) on amino acid (AA) supply to the udder, milk production, and manure nitrogen (N) losses of dairy cows. A corn and soybean-based diet deficient in metabolizable Met (~10 g/d) was supplemented with RPM providing 0, 11.0, 19.3, and 27.5 g/d of Met. Dry matter intake (DMI), milk production, plasma essential AA (EAA), mammary plasma flow (MPF), and fecal (FN) and urinary N (UN) outputs (g/d) were determined. The RPM increased linearly milk yield, milk protein yield, and energy corrected milk yield (p < 0.040) without affecting DMI. Milk protein yield increased by 50 g/d for the 19.3 vs. 0 g/d dose (p = 0.006) but the rate of increment decreased for 27.5 g/d dose. Plasma Met, and MPF increased linearly with RPM dose (p < 0.050). Apparent total tract digestibility of crude protein (p = 0.020) and FN (p = 0.081) decreased linearly with RPM. The UN did not change but total manure N decreased linearly with RPM (p = 0.054). The RPM (19.3 g/d) seemed to help cows overcome the metabolizable Met deficiency while mitigating manure N excretions to the environment.

The carbon and nitrogen budget of Desmophyllum dianthus—a voracious cold-water coral thriving in an acidified Patagonian fjord

In the North Patagonian fjord region, the cold-water coral (CWC) Desmophyllum dianthus occurs in high densities, in spite of low pH and aragonite saturation. If and how these conditions affect the energy demand of the corals is so far unknown. In a laboratory experiment, we investigated the carbon and nitrogen (C, N) budget of D. dianthus from Comau Fjord under three feeding scenarios: (1) live fjord zooplankton (100–2,300 µm), (2) live fjord zooplankton plus krill (>7 mm), and (3) four-day food deprivation. In closed incubations, C and N budgets were derived from the difference between C and N uptake during feeding and subsequent C and N loss through respiration, ammonium excretion, release of particulate organic carbon and nitrogen (POC, PON). Additional feeding with krill significantly increased coral respiration (35%), excretion (131%), and POC release (67%) compared to feeding on zooplankton only. Nevertheless, the higher C and N losses were overcompensated by the threefold higher C and N uptake, indicating a high assimilation and growth efficiency for the krill plus zooplankton diet. In contrast, short food deprivation caused a substantial reduction in respiration (59%), excretion (54%), release of POC (73%) and PON (87%) compared to feeding on zooplankton, suggesting a high potential to acclimatize to food scarcity (e.g., in winter). Notwithstanding, unfed corals ‘lost’ 2% of their tissue-C and 1.2% of their tissue-N per day in terms of metabolism and released particulate organic matter (likely mucus). To balance the C (N) losses, each D. dianthus polyp has to consume around 700 (400) zooplankters per day. The capture of a single, large krill individual, however, provides enough C and N to compensate daily C and N losses and grow tissue reserves, suggesting that krill plays an important nutritional role for the fjord corals. Efficient krill and zooplankton capture, as well as dietary and metabolic flexibility, may enable D. dianthus to thrive under adverse environmental conditions in its fjord habitat; however, it is not known how combined anthropogenic warming, acidification and eutrophication jeopardize the energy balance of this important habitat-building species.

The effects of precisely meeting estimated daily energy and lysine requirements for gestating sows over three consecutive pregnancies on sow reproductive and lactation performance

The objective of the current study was to determine effects of precisely meeting estimated daily energy and Lys requirements for gestating sows over three consecutive pregnancies on sow reproductive and lactation performance. A total of 105 sows (initial reproductive cycle 1.4±0.5) were randomly assigned to a precision (PF; n=50) or control (CON; n=55) feeding program between d 2 and 9 of gestation and housed in group-pens equipped with electronic sow feeders capable of blending two diets. The PF sows received unique daily blends of two isocaloric diets [2518 kcal/kg NE; 0.80 and 0.20% standardized ileal digestible (SID) Lys, respectively] while CON sows received a static blend throughout gestation to achieve 0.56% SID Lys. After weaning, sows were re-bred and entered the same feeding program as in the previous pregnancy for two subsequent pregnancy cycles (PF: n=36; CON: n=37; average reproductive cycle: 2.4±0.5; PF: n=25; CON: n=24; average reproductive cycle: 3.5±0.5). Sows on the PF program received 97, 105, and 118 % (average over three pregnancy cycles) of dietary energy and 67, 79, and 106 % of SID Lys intakes compared to CON between d 5 and 37, 38 and 72, and 73 and 108 of gestation, respectively. Estimated N (26.1 %) retention did not differ between gestation feeding programs in any pregnancy, but excess N excretion was less (1617 vs. 1750 ± 54 g/sow; P &lt; 0.01) for PF versus CON sows. Regardless of pregnancy cycle, sows that received the PF program had greater ADG between d 38 and 72 (614 vs. 518 ± 63 g/d; P &lt; 0.05) and between d 73 and 108 (719 vs. 618 ± 94 g/d; P = 0.063) of gestation, and greater loin depth gain between d 63 and 110 of gestation (0.7 vs. -1.1 ± 1.6 mm; P &lt; 0.05), but BW (235.1 kg) and backfat (17.8 mm) and loin (70.5 mm) depths on d 110 of gestation did not differ. The number of piglets born alive, stillborn, and mummified, and litter birth weight (16.5 kg) did not differ in any pregnancy cycle, nor did piglet ADG during lactation (250 g/d) and piglet BW (6.7 kg) at weaning. Sows that received the PF program during gestation had lower ADFI during lactation (5.7 vs. 6.2 ± 0.2 kg; P &lt; 0.01). Therefore, using feeding programs that precisely match estimated daily energy and Lys requirements for gestating sows provides the opportunity to reduce N losses to the environment and reduce lactation feed usage, without negatively affecting sow reproductive and lactation performance.

Field-scale monitoring of nitrate leaching in agriculture: assessment of three methods

Deterioration of groundwater quality due to nitrate loss from intensive agricultural systems can only be mitigated if methods for in-situ monitoring of nitrate leaching under active farmers’ fields are available. In this study, three methods were used in parallel to evaluate their spatial and temporal differences, namely ion-exchange resin-based Self-Integrating Accumulators (SIA), soil coring for extraction of mineral N (Nmin) from 0 to 90 cm in Mid-October (pre-winter) and Mid-February (post-winter), and Suction Cups (SCs) complemented by a HYDRUS 1D model. The monitoring, conducted from 2017 to 2020 in the Gäu Valley in the Swiss Central Plateau, covered four agricultural fields. The crop rotations included grass-clover leys, canola, silage maize and winter cereals. The monthly resolution of SC samples allowed identifying a seasonal pattern, with a nitrate concentration build-up during autumn and peaks in winter, caused by elevated water percolation to deeper soil layers in this period. Using simulated water percolation values, SC concentrations were converted into fluxes. SCs sampled 30% less N-losses on average compared to SIA, which collect also the wide macropore and preferential flows. The difference between Nmin content in autumn and spring was greater than nitrate leaching measured with either SIA or SCs. This observation indicates that autumn Nmin was depleted not only by leaching but also by plant and microbial N uptake and gaseous losses. The positive correlation between autumn Nmin content and leaching fluxes determined by either SCs or SIA suggests autumn Nmin as a useful relative but not absolute indicator for nitrate leaching. In conclusion, all three monitoring techniques are suited to indicate N leaching but represent different transport and cycling processes and vary in spatio-temporal resolution. The choice of monitoring method mainly depends (1) on the project’s goals and financial budget and (2) on the soil conditions. Long-term data, and especially the combination of methods, increase process understanding and generate knowledge beyond a pure methodological comparison.

Nitrogen Fertilization Guidelines for Potato Production in Florida

This new 11-page publication focuses on the nitrogen (N) fertilizer best management practices (BMP) for potato crop in Florida. The aim is to provide management strategies that comply with statewide BMP guidelines to maximize yield and economic return while minimizing N losses to the environment. Written by Lincoln Zotarelli, Tara Wade, Gary K. England, and Christian T. Christensen and published by the UF/IFAS Horticultural Sciences Department.https://edis.ifas.ufl.edu/hs1429