Does long-term soil warming affect microbial element limitation? A test by short-term assays of microbial growth responses to labile C, N and P additions

Author(s):  
Chupei Shi ◽  
Carolina Urbina Malo ◽  
Ye Tian ◽  
Shasha Zhang ◽  
Marilena Heitger ◽  
...  

<p>Human activities have caused global warming by 0.95 °C since the industrial revolution, and average temperatures in Austria have risen by almost 2 °C since 1880. Increased global mean temperatures have been reported to accelerate carbon (C) cycling, but also to promote nitrogen (N) and phosphorus (P) dynamics in terrestrial ecosystems. However, the extent of warming-induced increases in soil C, N and P processes can differ, causing an eventual uncoupling of biogeochemical C, N and P cycles, and leading to altered elemental imbalances between available plant and soil resources and soil microbial communities. The altered dynamics in soil C and nutrient availability caused by increased soil temperature could shift the growth-limiting element for soil microorganisms, with strong repercussions on the decomposition, mineralization and sequestration of organic C and nutrients. The latter relates to the conservative cycling of limiting elements while elements in excess are mineralized and released at greater rates by microbial communities.</p><p>Despite the many laboratory and in situ studies investigating factors that limit soil microbial activity, most of them explored nutrient addition effects on soil respiration or soil enzyme activities. A critical assessment, however, clearly indicated the inappropriateness of these measures to deduce growth-limiting nutrients for soil microbes. Similar to studies of plant nutrient limitation, unequivocal assessment of soil microbial element limitation can only be derived from the response of microbial growth to element amendments. To our knowledge this has not been performed on soils undergoing long-term soil warming.</p><p>In this study, we therefore investigated the effect of long-term soil warming on microbial nutrient limitation based on microbial growth measurements in a temperate calcareous forest soil. Soil samples were taken from two soil depths (0-10, 10-20 cm) in both control and heated plots in the Achenkirch soil warming project (>15 yrs soil warming by + 4 °C). Soil samples were pre-incubated at their corresponding field temperature after sieving and removal of visible roots. The soils were amended with different combinations of glucose-C, inorganic/organic N and inorganic/organic P in a full factorial design, the nutrients being dissolved in <sup>18</sup>O-water. After 24 hours of incubation, microbial growth was measured based on the <sup>18</sup>O incorporation into genomic DNA. Nutrient (co)limitation was determined by comparing microbial growth responses upon C and nutrient additions relative to unamended controls. Basal respiration was also measured based on the increase in headspace CO<sub>2</sub>, allowing to estimate microbial C use efficiency (CUE). The fate of C and nutrient amendments was finally traced by measurements of inorganic and organic extractable and microbial biomass C, N and P. This study will thereby provide key insights into potential shifts in limiting nutrients for microbial growth under long-term soil warming, and into concomitant effects on soil C and nutrient cycles.</p>

2020 ◽  
Author(s):  
Carolina Urbina Malo ◽  
Ye Tian ◽  
Chupei Shi ◽  
Shasha Zhang ◽  
Marilena Heitger ◽  
...  

<p>Despite the intensified efforts to understand the impacts of climate change on forest soil C dynamics, few studies have addressed the long term effects of warming on microbially mediated soil C and nutrient processes. In the few long-term soil warming experiments the initial stimulation of soil C cycling diminished with time, due to thermal acclimation of the microbial community or due to depletion of labile soil C as the major substrate for heterotrophic soil microbes. Thermal acclimation can arise as a consequence of prolonged warming and is defined as the direct organism response to elevated temperature across annual to decadal time-scales which manifest as a physiological change of the soil microbial community. This mechanism is clearly different from apparent thermal acclimation, where the attenuated response of soil microbial processes to warming is due to the exhaustion of the labile soil C pool.</p><p>The Achenkirch experiment, situated in the Northern Limestone Alps, Austria (47°34’ 50’’ N; 11°38’ 21’’ E; 910 m a.s.l.) is a long term (>15 yrs) soil warming experiment that has provided key insights into the effects of global warming on the forest soil C cycle. At the Achenkirch site, we have observed a sustained positive response of heterotrophic soil respiration and of soil CO<sub>2</sub> efflux to warming after nine years (2013), making it an appropriate setting for testing hypotheses about continued or decreasing warming effects at decadal scales. We collected soil from six warmed and six control plots in October 2019, from 0-10 cm and 10-20 cm depth, and incubated them at three different temperatures: ambient, +4, and +10 °C. We measured potential soil enzyme activities with fluorimetric assays, gross rates of protein depolymerization, N mineralization, and nitrification with <sup>15</sup>N isotope pool dilution approaches, and microbial growth, respiration, and C use efficiency (CUE) based on the <sup>18</sup>O incorporation in DNA and gas analysis.  Our preliminary results show that potential enzyme activities of aminopeptidase, N-acetylglucosaminidase, b-glucosidase, and acid phosphatase were stimulated by decadal soil warming by 1.7- to 3.5-fold, measured at the same i.e. ambient temperature. In contrast, the temperature sensitivity (Q10) remained unaltered between warmed and control soils for all enzyme activities (Q10=1.63-2.28), except for aminopeptidase where we observed a decrease in Q10 by 25% in warmed topsoils (0-10 cm). Aminopeptidase also had the highest temperature-sensitivity (Q10=2.39), causing a decrease of the enzymatic C: N acquisition ratio with warming. These results indicate an increasing investment in microbial N acquisition with warming. We will follow these trends based on results on gross rates of soil C and N processes, allowing to delineate decadal soil warming effects on soil microbial biogeochemistry and to understand their effect on the cross-talk between organic C and N cycling in calcareous forest soils.</p>


2020 ◽  
Author(s):  
Ye Tian ◽  
Carolina Urbina Malo ◽  
Chupei Shi ◽  
Shasha Zhang ◽  
Marilena Heitger ◽  
...  

<p>Global warming may accelerate soil carbon (C) and nutrient cycling as higher temperatures accelerate soil microbial and enzymatic activities. However, this enhanced soil C cycling can diminish with time due to the depletion of labile soil C or due to thermal acclimation of soil microbes, while the increased N cycling may be dampened over time in N-rich soils. Moreover, soil climate as well as the quality and quantity of plant inputs change between seasons, which could influence the C: nitrogen (N): phosphorus (P) stoichiometry of resources available for microbes and thereby alter the warming effect on microbial activities and nutrient cycling between seasons. Such seasonal changes caused inconsistent warming effects on extracellular enzyme activities and on soil respiration in some experiments, with warming effects turning from positive to negative between seasons, yet the underlying controls of these adverse effects are far from being well understood. In this study, we therefore aimed to investigate soil warming and seasonal effects on soil C, N, and P pools and processes in a temperate calcareous mixed forest. We collected soil samples in spring, summer and fall (May, August, and October 2019) from a long-term (>15 yrs) soil warming experiment in Achenkirch, Northern Limestone Alps, Austria (47°34’ 50’’ N; 11°38’ 21’’ E; 910 m a.s.l.). The samples were incubated at the corresponding in-situ temperatures in the laboratory. Microbial growth, respiration and C use efficiency were determined by following <sup>18</sup>O-H<sub>2</sub>O incorporation in DNA and by gas analysis. <sup>15</sup>N pool dilution assays were applied to quantify gross rates of protein depolymerization, N mineralization, and nitrification, whilst gross rates of soil inorganic P mobilization were measured by a <sup>33</sup>P pool dilution assay. Moreover, we measured the potential soil enzyme activities of four hydrolases and two oxidases, and determined contents of labile (extractable) and microbial biomass C, N, and P. This study will thereby provide a comprehensive insight into how soil warming influences soil microbial C, N, and P cycling in a temperate calcareous mixed forest as well as into their energetic, stoichiometric and soil microclimatic constraints. The long-term nature of this soil warming experiment will therefore allow predictions of the future biogeochemical behavior of calcareous forest soils, and deduce potential feed-backs on forest productivity, atmospheric composition and climate change.</p>


Agronomy ◽  
2017 ◽  
Vol 7 (2) ◽  
pp. 37 ◽  
Author(s):  
Sadikshya Dangi ◽  
Rebecca Tirado-Corbalá ◽  
James Gerik ◽  
Bradley Hanson

2020 ◽  
Vol 38 (1) ◽  
pp. 13-23 ◽  
Author(s):  
Monika Gorzelak ◽  
Breanne M. McAmmond ◽  
Jonathan D. Van Hamme ◽  
Christina Birnbaum ◽  
Corrina Thomsen ◽  
...  

2020 ◽  
Author(s):  
Jie Zhou ◽  
Yuan Wen ◽  
Lingling Shi ◽  
Michaela Dippold ◽  
Yakov Kuzyakov ◽  
...  

<p>The Paris climate agreement is pursuing efforts to limit the increase in global temperature to below 2 °C above pre-industrial level. The overall consequence of relatively slight warming (~2 °C), on soil C and N stocks will be dependent on microorganisms decomposing organic matter through release of extracellular enzymes. Therefore, the capacity of soil microbial community to buffer climate warming in long-term and the self-regulatory mechanisms mediating soil C and N cycling through enzyme activity and microbial growth require a detailed comparative study. Here, microbial growth and the dynamics of enzyme activity (involved in C and N cycling) in response to 8 years warming (ambient, +1.6 °C, +3.2 °C) were investigated to identify shifts in soil and microbial functioning. A slight temperature increase (+1.6 °C) only altered microbial properties, but had no effect on either hydrolytic enzyme activity or basic soil properties. Stronger warming (+3.2 °C) increased the specific growth rate (μ<sub>m</sub>) of the microbial community, indicating an alteration in their ecological strategy, i.e. a shift towards fast-growing microorganisms and accelerated microbial turnover. Warming strongly changed microbial physiological state, as indicated by a 1.4-fold increase in the fraction of growing microorganisms (GMB) and 2 times decrease in lag-time with warming. This reduced total microbial biomass but increased specific enzyme activity to be ready to decompose increased rhizodeposition, as supported by the higher potential activitiy (V<sub>max</sub>) and lower affinity to substrates (higher K<sub>m</sub>) of enzymes hydrolyzing cellobiose and proteins cleavage in warmed soil. In other words, stronger warming magnitude (+3.2 °C) changed microbial communities, and was sufficient to benefit fast-growing microbial populations with enzyme functions that specific to degrade labile SOM. Combining with 48 literature observations, we confirmed that the slight magnitude of temperature increase (< 2 °C) only altered microbial properties, but further temperature increases (2-4 °C) was sufficient to change almost all soil, microbial, and enzyme properties and related processes. As a consequence, the revealed microbial regulatory mechanism of stability of soil C storage is strongly depended on the magnitude of future climate warming.</p>


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