Computational studies of gas-phase accretion product formation involving RO2

Author(s):  
Theo Kurtén ◽  
Siddharth Iyer ◽  
Vili-Taneli Salo ◽  
Galib Hasan ◽  
Matti Rissanen ◽  
...  

<p>Field and laboratory studies have indirectly but conclusively established that reactions involving peroxy radicals (RO<sub>2</sub>) play a key role in the gas-phase formation of accretion products, also commonly referred to as “dimers”, as they typically contain roughly twice the number of carbon atoms compared to their hydrocarbon precursors. Using computational tools, we have recently presented two different potential mechanisms for this process.</p><p>First, direct and rapid recombination of peroxy and alkoxy (RO) radicals, analogous to the recently characterized RO<sub>2</sub> + OH reaction, leads to the formation of metastable RO<sub>3</sub>R’ trioxides, which may have lifetimes on the order of a hundred seconds. [1] However, due to both the limited lifetime of the trioxides, and the low concentration of alkoxy radicals, the RO<sub>2</sub> + R’O pathway is likely to be a minor, though not necessarily negligible, pathway for atmospheric dimer formation.</p><p>Second, we have shown that recombination of two peroxy radicals – phenomenologically known to be responsible for the formation of ROOR’ – type dimers – very likely occurs through a multi-step mechanism involving an intersystem crossing (ISC). [2]  In contrast to earlier predictions, we find that the rate-limiting step for the overall RO<sub>2</sub>  + R’O<sub>2</sub> reaction is the initial formation of a short-lived RO<sub>4</sub>R’ tetroxide intermediate. For tertiary RO<sub>2</sub>, the barrier for the tetroxide formation can be substantial. However, for all studied species the tetroxide decomposition is rapid, forming ground-state triplet O<sub>2</sub>, and a weakly bound triplet complex of two alkoxy radicals. The branching ratios of the different RO<sub>2</sub> + R’O<sub>2</sub> reaction channels are then determined by a three-way competition of this complex. For simple systems, the possible channels are dissociation (leading to RO + R’O), H-abstraction on the triplet surface (leading to RC=O + R’OH), and ISC and subsequent recombination on the singlet surface (leading to ROOR’). All of these can potentially be competive with each other, with rates very roughly on the order of 10<sup>9</sup> s<sup>-1</sup>. For more complex RO<sub>2</sub> parents, rapid unimolecular reactions of the daughter RO (such as alkoxy scissions) open up even more potential reaction channels, for example direct alkoxy – alkyl recombination to form (either singlet or triplet) ether-type (ROR’) dimers.</p><p>[1] Iyer, S., Rissanen, M. P. and Kurtén, T. Reaction Between Peroxy and Alkoxy Radicals can Form Stable Adducts. Journal of Physical Chemistry Letters, Vol. 10, 2051-2057, 2019.</p><p>[2] Valiev, R., Hasan, G., Salo, V.-T., Kubečka, J. and Kurtén, T. Intersystem Crossings Drive Atmospheric Gas-Phase Dimer Formation. Journal of Physical Chemistry A, Vol. 123, 6596-6604, 2019.</p><p> </p>

2008 ◽  
Vol 8 (14) ◽  
pp. 4117-4140 ◽  
Author(s):  
N. L. Ng ◽  
A. J. Kwan ◽  
J. D. Surratt ◽  
A. W. H. Chan ◽  
P. S. Chhabra ◽  
...  

Abstract. Secondary organic aerosol (SOA) formation from the reaction of isoprene with nitrate radicals (NO3) is investigated in the Caltech indoor chambers. Experiments are performed in the dark and under dry conditions (RH&lt10%) using N2O5 as a source of NO3 radicals. For an initial isoprene concentration of 18.4 to 101.6 ppb, the SOA yield (defined as the ratio of the mass of organic aerosol formed to the mass of parent hydrocarbon reacted) ranges from 4.3% to 23.8%. By examining the time evolutions of gas-phase intermediate products and aerosol volume in real time, we are able to constrain the chemistry that leads to the formation of low-volatility products. Although the formation of ROOR from the reaction of two peroxy radicals (RO2) has generally been considered as a minor channel, based on the gas-phase and aerosol-phase data it appears that RO2+RO2 reaction (self reaction or cross-reaction) in the gas phase yielding ROOR products is a dominant SOA formation pathway. A wide array of organic nitrates and peroxides are identified in the aerosol formed and mechanisms for SOA formation are proposed. Using a uniform SOA yield of 10% (corresponding to Mo≅10 μg m−3), it is estimated that ~2 to 3 Tg yr−1 of SOA results from isoprene+NO3. The extent to which the results from this study can be applied to conditions in the atmosphere depends on the fate of peroxy radicals in the nighttime troposphere.


2008 ◽  
Vol 8 (1) ◽  
pp. 3163-3226 ◽  
Author(s):  
N. L. Ng ◽  
A. J. Kwan ◽  
J. D. Surratt ◽  
A. W. H. Chan ◽  
P. S. Chhabra ◽  
...  

Abstract. Secondary organic aerosol (SOA) formation from the reaction of isoprene with nitrate radicals (NO3) is investigated in the Caltech indoor chambers. Experiments are performed in the dark and under dry conditions (RH<10%) using N2O5 as a source of NO3 radicals. For an initial isoprene concentration of 18.4 to 101.6 ppb, the SOA yield (defined as the ratio of the mass of organic aerosol formed to the mass of parent hydrocarbon reacted) ranges from 4.3% to 23.8%. By examining the time evolutions of gas-phase intermediate products and aerosol volume in real time, we are able to constrain the chemistry that leads to the formation of low-volatility products. Although the formation of ROOR from the reaction of two peroxy radicals (RO2) has generally been considered as a minor channel, based on the gas-phase and aerosol-phase data it appears that RO2+RO2 reaction (self reaction or cross-reaction) in the gas phase yielding ROOR products is a dominant SOA formation pathway. A wide array of organic nitrates and peroxides are identified in the aerosol formed and mechanisms for SOA formation are proposed. Using a uniform SOA yield of 10% (corresponding to Mo≅10 μg m−3), it is estimated that ~2 to 3 Tg yr−1 of SOA results from isoprene + NO3. The extent to which the results from this study can be applied to conditions in the atmosphere depends on the fate of peroxy radicals (i.e. the relative importance of RO2+RO2 versus RO2+NO3 reactions) in the nighttime troposphere.


2018 ◽  
Vol 115 (48) ◽  
pp. 12142-12147 ◽  
Author(s):  
Yue Zhao ◽  
Joel A. Thornton ◽  
Havala O. T. Pye

Organic peroxy radicals (RO2) are key intermediates in the atmospheric degradation of organic matter and fuel combustion, but to date, few direct studies of specific RO2 in complex reaction systems exist, leading to large gaps in our understanding of their fate. We show, using direct, speciated measurements of a suite of RO2 and gas-phase dimers from O3-initiated oxidation of α-pinene, that ∼150 gaseous dimers (C16–20H24–34O4–13) are primarily formed through RO2 cross-reactions, with a typical rate constant of 0.75–2 × 10−12 cm3 molecule−1 s−1 and a lower-limit dimer formation branching ratio of 4%. These findings imply a gaseous dimer yield that varies strongly with nitric oxide (NO) concentrations, of at least 0.2–2.5% by mole (0.5–6.6% by mass) for conditions typical of forested regions with low to moderate anthropogenic influence (i.e., ≤50-parts per trillion NO). Given their very low volatility, the gaseous C16–20 dimers provide a potentially important organic medium for initial particle formation, and alone can explain 5–60% of α-pinene secondary organic aerosol mass yields measured at atmospherically relevant particle mass loadings. The responses of RO2, dimers, and highly oxygenated multifunctional compounds (HOM) to reacted α-pinene concentration and NO imply that an average ∼20% of primary α-pinene RO2 from OH reaction and 10% from ozonolysis autoxidize at 3–10 s−1 and ≥1 s−1, respectively, confirming both oxidation pathways produce HOM efficiently, even at higher NO concentrations typical of urban areas. Thus, gas-phase dimer formation and RO2 autoxidation are ubiquitous sources of low-volatility organic compounds capable of driving atmospheric particle formation and growth.


2021 ◽  
Author(s):  
Philip T. M. Carlsson ◽  
Luc Vereecken ◽  
Anna Novelli ◽  
François Bernard ◽  
Birger Bohn ◽  
...  

&lt;p&gt;Experiments at atmospherically relevant conditions were performed in the simulation chamber SAPHIR, investigating the reaction of isoprene with NO&lt;sub&gt;3&lt;/sub&gt; and its subsequent oxidation. Due to the production of NO&lt;sub&gt;3&lt;/sub&gt; from the reaction of NO&lt;sub&gt;2&lt;/sub&gt; with O&lt;sub&gt;3&lt;/sub&gt; as well as the formation of OH in subsequent reactions, the reactions of isoprene with O&lt;sub&gt;3&lt;/sub&gt; and OH were estimated to contribute up to 15% of the total isoprene consumption each in these experiments. The ratio of RO&lt;sub&gt;2&lt;/sub&gt; to HO&lt;sub&gt;2&lt;/sub&gt; concentrations was varied by changing the reactant concentrations, which modifies the product distribution from bimolecular reactions of the nitrated RO&lt;sub&gt;2&lt;/sub&gt;. The reaction with HO&lt;sub&gt;2&lt;/sub&gt; or NO&lt;sub&gt;3&lt;/sub&gt; was found to be the main bimolecular loss process for the RO&lt;sub&gt;2&lt;/sub&gt; radicals under all conditions examined.&lt;/p&gt;&lt;p&gt;Yields of the first-generation isoprene oxygenated nitrates as well as the sum of methyl vinyl ketone (MVK) and methacrolein (MACR) were determined by high resolution proton mass spectrometry using the Vocus PTR-TOF. The experimental time series of these products are compared to model calculations based on the MCM v3.3.1,&lt;sup&gt;1&lt;/sup&gt; the isoprene mechanism as published by Wennberg &lt;em&gt;et al.&lt;/em&gt;&lt;sup&gt;2&lt;/sup&gt; and the newly developed FZJ-NO&lt;sub&gt;3&lt;/sub&gt;-isoprene mechanism,&lt;sup&gt;3&lt;/sup&gt; which incorporates theory-based rate coefficients for a wide range of reactions.&lt;/p&gt;&lt;p&gt;Among other changes, the FZJ-NO&lt;sub&gt;3&lt;/sub&gt;-isoprene mechanism contains a novel fast oxidation route through the epoxidation of alkoxy radicals, originating from the formation of nitrated peroxy radicals. This inhibits the formation of MVK and MACR from the NO&lt;sub&gt;3&lt;/sub&gt;-initiated oxidation of isoprene to practically zero, which agrees with the observations from chamber experiments. In addition, the FZJ-NO&lt;sub&gt;3&lt;/sub&gt;-isoprene mechanism increases the level of agreement for the main first-generation oxygenated nitrates.&lt;/p&gt;&lt;p&gt;&amp;#160;&lt;/p&gt;&lt;p&gt;&lt;sup&gt;1&lt;/sup&gt; M. E. Jenkin, J. C. Young and A. R. Rickard, The MCM v3.3.1 degradation scheme for isoprene, &lt;em&gt;Atmospheric Chem. Phys.&lt;/em&gt;, 2015, &lt;strong&gt;15&lt;/strong&gt;, 11433&amp;#8211;11459.&lt;/p&gt;&lt;p&gt;&lt;sup&gt;2&lt;/sup&gt; P. O. Wennberg &lt;em&gt;at al.&lt;/em&gt;, Gas-Phase Reactions of Isoprene and Its Major Oxidation Products, &lt;em&gt;Chem. Rev.&lt;/em&gt;, 2018, &lt;strong&gt;118&lt;/strong&gt;, 3337&amp;#8211;3390.&lt;span&gt;&amp;#160;&lt;/span&gt;&lt;/p&gt;&lt;p&gt;&lt;sup&gt;3&lt;/sup&gt; L. Vereecken &lt;em&gt;et al.&lt;/em&gt;, Theoretical and experimental study of peroxy and alkoxy radicals in the NO3-initiated oxidation of isoprene, &lt;em&gt;Phys. Chem. Chem. Phys.&lt;/em&gt;, submitted.&lt;/p&gt;


2014 ◽  
Vol 14 (8) ◽  
pp. 12121-12165 ◽  
Author(s):  
M. I. Jacobs ◽  
W. J. Burke ◽  
M. J. Elrod

Abstract. Isoprene, the most abundant non-methane volatile organic compound (VOC) emitted into the atmosphere, is known to undergo gas phase oxidation to form eight different hydroxynitrate isomers in "high NOx" environments. These hydroxynitrates are known to affect the global and regional formation of ozone and secondary organic aerosol (SOA), as well as affect the distribution of nitrogen. In the present study, we have synthesized three of the eight possible hydroxynitrates: 4-hydroxy-3-nitroxy isoprene (4,3-HNI) and E/Z-1-hydroxy-4-nitroxy isoprene (1,4-HNI). Oxidation of the 4,3-HNI isomer by the OH radical was monitored using a flow tube chemical ionization mass spectrometer (FT-CIMS), and its OH rate constant was determined to be (3.64 ± 0.41) × 10−11 cm3 molecule−1 s−1. The products of 4,3-HNI oxidation were monitored, and a mechanism to explain the products was developed. An isoprene epoxide (IEPOX) – a species important in SOA chemistry and thought to originate only from "low NOx" isoprene oxidation – was found as a minor, but significant product. Additionally, hydrolysis kinetics of the three synthesized isomers were monitored with NMR. The bulk, neutral solution hydrolysis rate constants for 4,3-HNI and the 1,4-HNI isomers were (1.59±0.03 × 10−5 s−1 and (6.76 ± 0.09) × 10−3 s−1, respectively. The hydrolysis reactions of each isomer were found to be general acid-catalyzed. The reaction pathways, product yields and atmospheric implications for both the gas phase and aerosol-phase reactions are discussed.


Author(s):  
Richard J. Puddephatt

Cecil Bawn was a physical chemist with particular expertise in chemical kinetics. Early in his career he made pioneering studies of free radical reactions in the gas phase and, during the war years, on the chemistry of high explosives. From mid career, he was one of the pioneers of polymer chemistry and established and led a strong and diverse group of polymer scientists at the University of Liverpool. He was a private and enigmatic person, with a strong sense of duty. His caring and helpful attitude was greatly appreciated locally by his students and younger faculty members. Nationally, he made outstanding service contributions to physical chemistry and polymer chemistry.


2015 ◽  
Vol 112 (49) ◽  
pp. 15030-15035 ◽  
Author(s):  
Fabio Pietrucci ◽  
Antonino Marco Saitta

Increasing experimental and theoretical evidence points to formamide as a possible hub in the complex network of prebiotic chemical reactions leading from simple precursors like H2, H2O, N2, NH3, CO, and CO2 to key biological molecules like proteins, nucleic acids, and sugars. We present an in-depth computational study of the formation and decomposition reaction channels of formamide by means of ab initio molecular dynamics. To this aim we introduce a new theoretical method combining the metadynamics sampling scheme with a general purpose topological formulation of collective variables able to track a wide range of different reaction mechanisms. Our approach is flexible enough to discover multiple pathways and intermediates starting from minimal insight on the systems, and it allows passing in a seamless way from reactions in gas phase to reactions in liquid phase, with the solvent active role fully taken into account. We obtain crucial new insight into the interplay of the different formamide reaction channels and into environment effects on pathways and barriers. In particular, our results indicate a similar stability of formamide and hydrogen cyanide in solution as well as their relatively facile interconversion, thus reconciling experiments and theory and, possibly, two different and competing prebiotic scenarios. Moreover, although not explicitly sought, formic acid/ammonium formate is produced as an important formamide decomposition byproduct in solution.


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