scholarly journals A Synopsis of Global Mapping of Freshwater Habitats and Biodiversity: Implications for Conservation

2018 ◽  
Author(s):  
Ryan A. McManamay ◽  
Natalie A. Griffiths ◽  
Christoper R. DeRolph ◽  
Brenda M. Pracheil
Keyword(s):  
Global Mapping ◽  
Freshwater Habitats

The diet of otters (Lutra lutra L.) in Danish freshwater habitats: comparisons of prey fish populations

1999 ◽  
Vol 248 (1) ◽  
pp. 1-13 ◽  
Author(s):  
H.-M. Taastrøm ◽  
L. Jacobsen
Keyword(s):  
Fish Populations ◽  
Lutra Lutra ◽  
Prey Fish ◽  
Freshwater Habitats

Protozooplankton: Ciliates

2017 ◽  
Author(s):  
Alex Kraberg ◽  
Rowena Stern ◽  
Michaela Strüder-Kypke
Keyword(s):  
Life Cycle ◽  
Nutrient Cycling ◽  
Food Web ◽  
Tree Of Life ◽  
Family Level ◽  
Freshwater Habitats

This chapter describes the taxonomy of ciliates. Ciliates can be found in almost every environment; the majority of species, however, are aquatic and occur in marine, brackish, and freshwater habitats. They play a major role in nutrient cycling in the food web; some are also capable of photosynthesis through acquisition of chloroplasts from their prey. The chapter covers their life cycle, generalized morphology, and ecology and distribution. It includes a section that indicates the systematic placement of the taxon described within the tree of life, and lists the key marine representative illustrated in the chapter (usually to genus or family level). This section also provides information on the taxonomic authorities responsible for the classification adopted, recent changes which might have occurred, and lists relevant taxonomic sources.

scholarly journals Have Niche, Will Travel. New Means of Linking Diet and Ecomorphology Reveals Niche Conservatism in Freshwater Cottoid Fishes

2019 ◽  
Vol 1 (1) ◽  
Author(s):  
T J Buser ◽  
D L Finnegan ◽  
A P Summers ◽  
M A Kolmann
Keyword(s):  
Niche Conservatism ◽  
Freshwater Species ◽  
Evolutionary Transitions ◽  
Adaptive Diversification ◽  
Functional Aspects ◽  
Ecological Evolution ◽  
Jaw Apparatus ◽  
Cottoid Fishes ◽  
Freshwater Habitats ◽  
Dietary Niche

Synopsis Evolutionary transitions between habitats have been catalysts for some of the most stunning examples of adaptive diversification, with novel niches and new resources providing ecological opportunity for such radiations. In aquatic animals, transitions from saltwater to freshwater habitats are rare, but occur often enough that in the Neotropics for example, marine-derived fishes contribute noticeably to regional ichthyofaunal diversity. Here, we investigate how morphology has evolved in a group of temperate fishes that contain a marine to freshwater transition: the sculpins (Percomorpha; Cottoidea). We devised a novel method for classifying dietary niche and relating functional aspects of prey to their predators. Coupled with functional measurements of the jaw apparatus in cottoids, we explored whether freshwater sculpins have fundamentally changed their niche after invading freshwater (niche lability) or if they retain a niche similar to their marine cousins (niche conservatism). Freshwater sculpins exhibit both phylogeographical and ecological signals of phylogenetic niche conservatism, meaning that regardless of habitat, sculpins fill similar niche roles in either saltwater or freshwater. Rather than competition guiding niche conservatism in freshwater cottoids, we argue that strong intrinsic constraints on morphological and ecological evolution are at play, contra to other studies of diversification in marine-derived freshwater fishes. However, several intertidal and subtidal sculpins as well as several pelagic freshwater species from Lake Baikal show remarkable departures from the typical sculpin bauplan. Our method of prey categorization provides an explicit, quantitative means of classifying dietary niche for macroevolutionary studies, rather than relying on somewhat arbitrary means used in previous literature.

3D global mapping of large-scale unstructured orchard integrating eye-in-hand stereo vision and SLAM

2021 ◽  
Vol 187 ◽  
pp. 106237
Author(s):  
Mingyou Chen ◽  
Yunchao Tang ◽  
Xiangjun Zou ◽  
Zhaofeng Huang ◽  
Hao Zhou ◽  
...  
Keyword(s):  
Stereo Vision ◽  
Large Scale ◽  
Global Mapping

scholarly journals Global mapping of protein–metabolite interactions in Saccharomyces cerevisiae reveals that Ser-Leu dipeptide regulates phosphoglycerate kinase activity

2021 ◽  
Vol 4 (1) ◽  
Author(s):  
Marcin Luzarowski ◽  
Rubén Vicente ◽  
Andrei Kiselev ◽  
Mateusz Wagner ◽  
Dennis Schlossarek ◽  
...  
Keyword(s):  
Saccharomyces Cerevisiae ◽  
Small Molecules ◽  
Phosphoglycerate Kinase ◽  
Glycolytic Enzyme ◽  
Diauxic Shift ◽  
Cellular Processes ◽  
Targeted Analysis ◽  
Global Mapping ◽  
Biochemical Approach ◽  
User Friendly

AbstractProtein–metabolite interactions are of crucial importance for all cellular processes but remain understudied. Here, we applied a biochemical approach named PROMIS, to address the complexity of the protein–small molecule interactome in the model yeast Saccharomyces cerevisiae. By doing so, we provide a unique dataset, which can be queried for interactions between 74 small molecules and 3982 proteins using a user-friendly interface available at https://promis.mpimp-golm.mpg.de/yeastpmi/. By interpolating PROMIS with the list of predicted protein–metabolite interactions, we provided experimental validation for 225 binding events. Remarkably, of the 74 small molecules co-eluting with proteins, 36 were proteogenic dipeptides. Targeted analysis of a representative dipeptide, Ser-Leu, revealed numerous protein interactors comprising chaperones, proteasomal subunits, and metabolic enzymes. We could further demonstrate that Ser-Leu binding increases activity of a glycolytic enzyme phosphoglycerate kinase (Pgk1). Consistent with the binding analysis, Ser-Leu supplementation leads to the acute metabolic changes and delays timing of a diauxic shift. Supported by the dipeptide accumulation analysis our work attests to the role of Ser-Leu as a metabolic regulator at the interface of protein degradation and central metabolism.

scholarly journals The labour of place: Memory and extended reality (XR) in migration museums

2021 ◽  
Vol 14 (3) ◽  
pp. 606-621
Author(s):  
Anna Reading ◽  
Jim Bjork ◽  
Jack Hanlon ◽  
Neil Jakeman
Keyword(s):  
Web 2.0 ◽  
Innovative Approach ◽  
Place Making ◽  
Place Memory ◽  
Museum Exhibitions ◽  
Global Mapping ◽  
The Uk ◽  
The Relationship

How do we understand the relationship between memory and place in the context of Extended Reality (XR) migration museum exhibitions? The study combines a global mapping of XR within migration museums, a user analysis of Cologne’s virtual migration museum, and practice-led research with the UK Migration Museum to argue that XR places in Web 2.0 constitute a multiplication of memory’s significant localities. These include a migration memory’s place of beginning (the location of a migrant experience), the place of production (where the memory is transformed into representation) and the place of consumption (where the mediated memory is engaged with, looked at, heard). Mnemonic labour involving digital frictions at each of these sites constitutes a form of multiple place-making with complex feelings, meanings, and (dis)connections. This points to an innovative approach to understanding and curating XR experiences with museums that recognises the significance of the labour of place.

scholarly journals The weakly electric fish, Apteronotus albifrons, actively avoids experimentally induced hypoxia

2021 ◽  
Author(s):  
Stefan Mucha ◽  
Lauren J. Chapman ◽  
Rüdiger Krahe
Keyword(s):  
Active Avoidance ◽  
Electric Fish ◽  
Electric Organ ◽  
The Other ◽  
Weakly Electric Fish ◽  
Dissolved Oxygen Concentration ◽  
Shuttle Box ◽  
Freshwater Habitats ◽  
Electric Organ Discharges ◽  
Weakly Electric

AbstractAnthropogenic environmental degradation has led to an increase in the frequency and prevalence of aquatic hypoxia (low dissolved oxygen concentration, DO), which may affect habitat quality for water-breathing fishes. The weakly electric black ghost knifefish, Apteronotus albifrons, is typically found in well-oxygenated freshwater habitats in South America. Using a shuttle-box design, we exposed juvenile A. albifrons to a stepwise decline in DO from normoxia (> 95% air saturation) to extreme hypoxia (10% air saturation) in one compartment and chronic normoxia in the other. On average, A. albifrons actively avoided the hypoxic compartment below 22% air saturation. Hypoxia avoidance was correlated with upregulated swimming activity. Following avoidance, fish regularly ventured back briefly into deep hypoxia. Hypoxia did not affect the frequency of their electric organ discharges. Our results show that A. albifrons is able to sense hypoxia at non-lethal levels and uses active avoidance to mitigate its adverse effects.

scholarly journals Freshwater Dothideomycetes

2020 ◽  
Author(s):  
Wei Dong ◽  
Bin Wang ◽  
Kevin D. Hyde ◽  
Eric H. C. McKenzie ◽  
Huzefa A. Raja ◽  
...  
Keyword(s):  
New Species ◽  
Woody Debris ◽  
Diverse Group ◽  
New Combinations ◽  
New Genera ◽  
Freshwater Habitats ◽  
Multigene Analyses

AbstractFreshwater Dothideomycetes are a highly diverse group of fungi, which are mostly saprobic in freshwater habitats worldwide. They are important decomposers of submerged woody debris and leaves in water. In this paper, we outline the genera of freshwater Dothideomycetes with notes and keys to species. Based on multigene analyses and morphology, we introduce nine new genera, viz. Aquimassariosphaeria, Aquatospora, Aquihelicascus, Fusiformiseptata, Neohelicascus, Neojahnula, Pseudojahnula, Purpureofaciens, Submersispora; 33 new species, viz. Acrocalymma bipolare, Aquimassariosphaeria kunmingensis, Aquatospora cylindrica, Aquihelicascus songkhlaensis, A. yunnanensis, Ascagilis submersa, A. thailandensis, Bambusicola aquatica, Caryospora submersa, Dictyocheirospora thailandica, Fusiformiseptata crocea, Helicosporium thailandense, Hongkongmyces aquaticus, Lentistoma aquaticum, Lentithecium kunmingense, Lindgomyces aquaticus, Longipedicellata aquatica, Neohelicascus submersus, Neohelicomyces dehongensis, N. thailandicus, Neohelicosporium submersum, Nigrograna aquatica, Occultibambusa kunmingensis, Parabambusicola aquatica, Pseudoasteromassaria aquatica, Pseudoastrosphaeriella aquatica, Pseudoxylomyces aquaticus, Purpureofaciens aquatica, Roussoella aquatica, Shrungabeeja aquatica, Submersispora variabilis, Tetraploa puzheheiensis, T. yunnanensis; 16 new combinations, viz. Aquimassariosphaeria typhicola, Aquihelicascus thalassioideus, Ascagilis guttulaspora, A. queenslandica, A. seychellensis, A. sunyatsenii, Ernakulamia xishuangbannaensis, Neohelicascus aquaticus, N. chiangraiensis, N. egyptiacus, N. elaterascus, N. gallicus, N. unilocularis, N. uniseptatus, Neojahnula australiensis, Pseudojahnula potamophila; 17 new geographical and habitat records, viz. Aliquandostipite khaoyaiensis, Aquastroma magniostiolata, Caryospora aquatica, C. quercus, Dendryphiella vinosa, Ernakulamia cochinensis, Fissuroma neoaggregatum, Helicotruncatum palmigenum, Jahnula rostrata, Neoroussoella bambusae, N. leucaenae, Occultibambusa pustula, Paramonodictys solitarius, Pleopunctum pseudoellipsoideum, Pseudocapulatispora longiappendiculata, Seriascoma didymosporum, Shrungabeeja vadirajensis and ten new collections from China and Thailand, viz. Amniculicola guttulata, Aquaphila albicans, Berkleasmium latisporum, Clohesyomyces aquaticus, Dictyocheirospora rotunda, Flabellascoma fusiforme, Pseudoastrosphaeriella bambusae, Pseudoxylomyces elegans, Tubeufia aquatica and T. cylindrothecia. Dendryphiella phitsanulokensis and Tubeufia roseohelicospora are synonymized with D. vinosa and T. tectonae, respectively. Six orders, 43 families and 145 genera which belong to freshwater Dothideomycetes are reviewed. Of these, 46 genera occur exclusively in freshwater habitats. A world map illustrates the distribution of freshwater Dothideomycetes.

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