Reassessment of Dyfrolomyces and Four New Species of Melomastia from Olive (Olea europaea) in Sichuan Province, China

Pleurotremataceae species are saprobes on decaying wood in terrestrial, mangrove, and freshwater habitats. The generic boundary of the family has traditionally been based on morphology. All genera of Pleurotremataceae have a high degree of morphological overlap, of which the generic circumscription of Melomastia and Dyfrolomyces has not been well resolved. Thus, the delimitation of genera has always been challenging. Melomastia traditionally differs from Dyfrolomyces in having 2-septate, oblong, with obtuse-ends ascospores. These main characteristics have been used to distinguish Melomastia from Dyfrolomyces for a long time. However, the above characteristics sometimes overlap among Dyfrolomyces and Melomastia species. Based on the morphology and multigene phylogeny with newly obtained data, we synonymized Dyfrolomyces under Melomastia following up-to-date results. Four novel species (i.e., Melomastia fusispora, M. oleae, M. sichuanensis and M. winteri) collected from the dead branches of Olea europaea L. in Chengdu Olive Base, Sichuan Province in China are introduced based on detailed morphological characterization and phylogenetic analyses of sequences based on nuclear ribosomal (LSU and SSU) and protein-coding gene (tef1-α). The 11 new combinations proposed are Melomastia aquatica (= Dyfrolomyces aquaticus), M. chromolaenae (= D. chromolaenae), M. distoseptata (= D. distoseptatus), M. mangrovei (= D. mangrovei), M. marinospora (= D. marinosporus), M. neothailandica (= D. neothailandicus), M. phetchaburiensis (= D. phetchaburiensis), M. sinensis (= D. sinensis), M. thailandica (= D. thailandica), M. thamplaensis (= D. thamplaensis) and M. tiomanensis (= D. tiomanensis).

New species, Parahelicomyces yunnanensis sp. nov. and Tubeufia nigroseptum sp. nov. from freshwater habitats in Yunnan, China

Diversity of lignicolous freshwater fungi in northwestern Yunnan, China is currently being studied. Four fresh collections of tubeufiaceous taxa were collected and identified. Among of them, Parahelicomyces yunnanensis sp. nov and Tubeufia nigroseptum sp. nov. are introduced as new species based on morphology and molecular phylogenetic analysis of combined ITS, SSU, TEF1-α and RPB2 sequence data. The detailed descriptions and illustrations of the new species are provided, as well as the morphological comparison with similar taxa are discussed. Two strains of Neohelicomyces aquaticus and Tubeufia cylindrothecia are provided.

Ubiquitous but Ignored? A Case of Water Beetle in Southeastern Europe

Although freshwater habitats, especially springs, are widely recognized as top-priority habitats for monitoring and conservation procedures, their fauna, especially water beetles, are still poorly studied in the southeastern part of Europe. Thus, the dominant water beetle in these habitats, E. bosnica (Zaitzev, 1908) (Insecta: Coleoptera: Elmidae), has been completely ignored and misidentified. This study represents the first review of its taxonomy and its population and ecological traits. Both published and unpublished data are presented and discussed, as well as the results of field sampling in 46 springs and other waterbodies conducted in this region from 2004 to 2019. The identification characters of the male genitalia and the first DNA barcode of the species are presented. The results confirm the close phylogenetic relationship of E. bosnica with E. aenea (Müller, 1806) and E. rioloides (Kuwert, 1890). The species proved to be a useful environmental descriptor and can easily be used as a biological indicator due to its easy identification. The species shows remarkable sensitivity to environmental conditions and inhabits sites that are potentially under increased anthropogenic pressure and could disappear at an alarming rate. Thus, karstic habitats should be included in future conservation and monitoring procedures in this part of Europe.

Dinaric karst intermittent rivers harbour some rare mayflies (Insecta, Ephemeroptera)

While investigating the aquatic macroinvertebrate fauna of four intermittent Dinaric karst rivers in Croatia, we confirmed or recorded new distribution data and ecological features for several mayfly species rare in Croatian freshwater habitats: Nigrobaetis niger (Linnaeus, 1761), Procloeon pennulatum (Eaton, 1870) and Paraleptophlebia werneri Ulmer, 1920. To our knowledge, this is the first record of N. niger in intermittent lotic habitats. We discuss their substrate preferences in the studied habitats as well as their relationships with measured physico-chemical water parameters. The newly obtained results confirm that our knowledge about Croatian mayfly fauna and species ecological requirements in intermittent Mediterranean rivers is still incomplete and is increasing with systematic studies.

Submergence of the filamentous Zygnematophyceae Mougeotia induces differential gene expression patterns associated with core metabolism and photosynthesis

The streptophyte algal class Zygnematophyceae is the closest algal sister lineage to land plants. In nature, Zygnematophyceae can grow in both terrestrial and freshwater habitats and how they do this is an important unanswered question. Here, we studied what happens to the zygnematophyceaen alga Mougeotia sp., which usually occurs in permanent and temporary freshwater bodies, when it is shifted to liquid growth conditions after growth on a solid substrate. Using global differential gene expression profiling, we identified changes in the core metabolism of the organism interlinked with photosynthesis; the latter went hand in hand with measurable impact on the photophysiology as assessed via pulse amplitude modulation (PAM) fluorometry. Our data reveal a pronounced change in the overall physiology of the alga after submergence and pinpoint candidate genes that play a role. These results provide insight into the importance of photophysiological readjustment when filamentous Zygnematophyceae transition between terrestrial and aquatic habitats.

New Dothideomycetes from Freshwater Habitats in Spain

The Dothideomycetes are a class of cosmopolitan fungi that are present principally in terrestrial environments, but which have also been found in freshwater and marine habitats. In the present study, more than a hundred samples of plant debris were collected from various freshwater locations in Spain. Its incubation in wet chambers allowed us to detect and to isolate in pure culture numerous fungi producing asexual reproductive fruiting bodies (conidiomata). Thanks to a morphological comparison and to a phylogenetic analysis that combined the internal transcribed spacer (ITS) region of the nrDNA with fragments of the RNA polymerase II subunit 2 (rpb2), beta tubulin (tub2), and the translation elongation factor 1-alpha (tef-1) genes, six of those strains were identified as new species to science. Three belong to the family Didymellaceae: Didymella brevipilosa, Heterophoma polypusiformis and Paraboeremia clausa; and three belong to the family Phaeosphaeriaceae:Paraphoma aquatica, Phaeosphaeria fructigena and Xenophoma microspora. The finding of these new taxa significantly increases the number of the coelomycetous fungi that have been described from freshwater habitats.

Variability in mosquito community composition associated with estuarine wetlands in Northern NSW, Australia

The Northern Rivers region of NSW, Australia, is well documented as being impacted by nuisance-biting mosquitoes and mosquito-borne disease. Mosquitoes of greatest concern are those associated with estuarine and brackish water habitats associated with coastal wetlands and understanding the spatial variability in abundance and diversity will assist the assessment of risk and inform surveillance and control programs. Adult mosquito populations were sampled, using carbon dioxide baited traps, at four locations within the Richmond River estuary at Ballina, NSW, Australia, during January and February 2021. Concomitant sampling of habitats for immature mosquitoes was also undertaken. A total of 16,467 mosquitoes was collected at all sites across two sampling periods with the most abundant mosquitoes, Verrallina funerea, Aedes vigilax, and Culex sitiens, those typically associated with estuarine environments. Culex annulirostris, a mosquito associated with freshwater habitats, and Aedes notoscriptus, a mosquito associated with water-holding containers, were also commonly collected. The mosquito communities differed, in relative abundance and species richness, between the four locations. The result highlighted the need for authorities to understand the variability in productivity of potential mosquito habitats, beyond those determinants associated with vegetation communities alone, when assessing suitable locations of mosquito surveillance and integrated mosquito management.

Sporidesmiella lignicola sp. nov., a new hyphomycetous fungus from freshwater habitats in China

Freshwater fungi, growing on submerged wood, can promote the degradation of organisms and the reuse of rotten wood energy and play key roles in freshwater ecosystems. Here, a new hyphomycetous fungus, Sporidesmiella lignicola, was isolated and identified from submerged wood samples collected in a small stream in Jiangxi Province, south-eastern China. The new taxon was studied, based on morphological characters and phylogenetic analyses combined with LSU, ITS, TEF1α and RPB2 sequences data. Sporidesmiella lignicola was morphologically characterised by its pink colonies on PDA medium in prophase, macronematous, mononematous, solitary, brown, septate, unbranched, straight or slightly flexuous conidiophores with holoblastic, polyblastic, integrated, terminal, pale brown conidiogenous cells and cylindrical, narrowly clavate, broadly obovoid to cuneiform, 3–4-distoseptate, olivaceous brown or brown conidia with rounded apex. A phylogenetic tree was constructed, based on the combination of LSU, ITS, TEF1α and RPB2 sequences data.

Rhodobacter amnigenus sp. nov. and Rhodobacter ruber sp. nov., isolated from freshwater habitats

Two bacterial strains, designated HSP-20T and CCP-1T, isolated from freshwater habitats in Taiwan, were characterized by polyphasic taxonomy. Both strains were Gram-stain-negative, aerobic, non-motile and rod-shaped. Cells of strains HSP-20T and CCP-1T formed pink and dark red coloured colonies, respectively. Both strains contained bacteriochlorophyll a, and showed optimum growth under anaerobic conditions by photoheterotrophy, but no growth by photoautotrophy. Phylogenetic analyses based on 16S rRNA gene and whole-genome sequences indicated that both strains belonged to the genus Rhodobacter . Analysis of 16S rRNA gene sequences showed that strains HSP-20T and CCP-1T shared 98.3 % sequence similarity and were closely related to Rhodobacter tardus CYK-10T (96.0 %) and Rhodobacter flagellatus SYSU G03088T (96.0 %), respectively. Both strains shared common chemotaxonomic characteristics including Q-10 as the major isoprenoid quinone, C18 : 1 ω7c as the predominant fatty acid, and phosphatidylethanolamine, phosphatidylglycerol and phosphatidylcholine as the main polar lipids. The DNA G+C content of both strains was 66.2 mol%. The average nucleotide identity, average amino acid identity and digital DNA–DNA hybridization values between these two novel isolates and their closest relatives were below the cut-off values of 95–96, 90 and 70 %, respectively, used for species demarcation. On the basis of phenotypic and genotypic properties and phylogenetic inference, both strains should be classified as novel species within the genus Rhodobacter , for which the names Rhodobacter amnigenus sp. nov. (=BCRC 81193T=LMG 31334T) and Rhodobacter ruber sp. nov. (=BCRC 81189T=LMG 31335T) are proposed.

Assessing the Effects of Multiple Stressors on Aquatic Systems across Temporal and Spatial Scales: From Measurement to Management

Freshwater habitats are home to a disproportionately high biodiversity, given the total area they cover worldwide, hosting 10% of all species while occupying less than 1% of the Earth’s surface [...]