scholarly journals Hypersaline lakes harbor more active bacterial communities

Author(s):  
Zachary T Aanderud ◽  
Joshua C Vert ◽  
Jay T Lennon ◽  
Tylan W Magnusson ◽  
Donald P Breakwell ◽  
...  

Extremophiles employ a diverse array of resistance strategies to thrive under harsh environmental conditions but maintaining these adaptations comes at an energetic cost. If energy reserves to drop too low, extremophiles may enter a dormant state of reduced metabolic activity to survive. Dormancy is frequently offered as a plausible explanation for the persistence of bacteria under suboptimal environmental conditions with the prevalence of this mechanism only expected to rise as stressful conditions intensify. We estimated dormancy in ten hypersaline and freshwater lakes across the Western United States. To our surprise, we found that extreme environmental conditions did not induce higher levels of bacterial dormancy. Based on our approach using rRNA:rDNA gene ratios to estimate activity, halophilic and halotolerant bacteria were classified as inactive at a similar percentage as freshwater bacteria, and the proportion of the community exhibiting dormancy was considerably lower (16%) in hypersaline than freshwater lakes across a range of cutoffs estimating activity. Of the multiple chemical characteristics we evaluated, salinity and, to a lesser extent, total phosphorus concentrations influenced activity. But instead of dormancy being more common as stressful conditions intensified, the percentage of the community residing in an inactive state decreased with increasing salinity in freshwater and hypersaline lakes, suggesting that salinity acts as a strong environmental filter selecting for bacteria that persist and thrive under saltier conditions. Within the compositionally distinct and less diverse hypersaline communities, abundant taxa were disproportionately active and localized in families Microbacteriaceae (Actinobacteria), Nitriliruptoraceae (Actinobacteria), and Rhodobacteraceae (Alphaproteobacteria). Our results demonstrate that extreme environments may not necessarily be stressful or suboptimal for highly adapted extremophiles causing them to need dormancy less often to survive.

2016 ◽  
Author(s):  
Zachary T Aanderud ◽  
Joshua C Vert ◽  
Jay T Lennon ◽  
Tylan W Magnusson ◽  
Donald P Breakwell ◽  
...  

Extremophiles employ a diverse array of resistance strategies to thrive under harsh environmental conditions but maintaining these adaptations comes at an energetic cost. If energy reserves to drop too low, extremophiles may enter a dormant state of reduced metabolic activity to survive. Dormancy is frequently offered as a plausible explanation for the persistence of bacteria under suboptimal environmental conditions with the prevalence of this mechanism only expected to rise as stressful conditions intensify. We estimated dormancy in ten hypersaline and freshwater lakes across the Western United States. To our surprise, we found that extreme environmental conditions did not induce higher levels of bacterial dormancy. Based on our approach using rRNA:rDNA gene ratios to estimate activity, halophilic and halotolerant bacteria were classified as inactive at a similar percentage as freshwater bacteria, and the proportion of the community exhibiting dormancy was considerably lower (16%) in hypersaline than freshwater lakes across a range of cutoffs estimating activity. Of the multiple chemical characteristics we evaluated, salinity and, to a lesser extent, total phosphorus concentrations influenced activity. But instead of dormancy being more common as stressful conditions intensified, the percentage of the community residing in an inactive state decreased with increasing salinity in freshwater and hypersaline lakes, suggesting that salinity acts as a strong environmental filter selecting for bacteria that persist and thrive under saltier conditions. Within the compositionally distinct and less diverse hypersaline communities, abundant taxa were disproportionately active and localized in families Microbacteriaceae (Actinobacteria), Nitriliruptoraceae (Actinobacteria), and Rhodobacteraceae (Alphaproteobacteria). Our results demonstrate that extreme environments may not necessarily be stressful or suboptimal for highly adapted extremophiles causing them to need dormancy less often to survive.


Author(s):  
Bin Ji ◽  
Cheng Liu ◽  
Jiechao Liang ◽  
Jian Wang

Urban freshwater lakes play an indispensable role in maintaining the urban environment and are suffering great threats of eutrophication. Until now, little has been known about the seasonal bacterial communities of the surface water of adjacent freshwater urban lakes. This study reported the bacterial communities of three adjacent freshwater lakes (i.e., Tangxun Lake, Yezhi Lake and Nan Lake) during the alternation of seasons. Nan Lake had the best water quality among the three lakes as reflected by the bacterial eutrophic index (BEI), bacterial indicator (Luteolibacter) and functional prediction analysis. It was found that Alphaproteobacteria had the lowest abundance in summer and the highest abundance in winter. Bacteroidetes had the lowest abundance in winter, while Planctomycetes had the highest abundance in summer. N/P ratio appeared to have some relationships with eutrophication. Tangxun Lake and Nan Lake with higher average N/P ratios (e.g., N/P = 20) tended to have a higher BEI in summer at a water temperature of 27 °C, while Yezhi Lake with a relatively lower average N/P ratio (e.g., N/P = 14) tended to have a higher BEI in spring and autumn at a water temperature of 9–20 °C. BEI and water temperature were identified as the key parameters in determining the bacterial communities of lake water. Phosphorus seemed to have slightly more impact on the bacterial communities than nitrogen. It is expected that this study will help to gain more knowledge on urban lake eutrophication.


1982 ◽  
Vol 60 (2) ◽  
pp. 114-119 ◽  
Author(s):  
G. W. Mainwood ◽  
M. Alward ◽  
B. Eiselt

Rats were fed on a diet containing 1% β-guanidinopropionate (Gp) to deplete their muscles of creatine. The apparent energy reserves (creatine phosphate (CrP) + ATP) of rested state diaphragm muscle strips were found to be 79% depleted by this treatment. To determine if the effective energy reserves for contraction were depleted to a similar extent, the response to direct electrical stimulation (0.2-s tetani) was measured in the presence of inhibitors of respiration (NaCN) and glycolysis (iodoacetate). Only 4 ± 1 contractions could be elicited from strips from Gp-fed animals. Normal strips gave 15 ± 2 contractions under the same conditions. For both sets of diaphragms the energetic cost of contraction in terms of ~P was approximately 1 μmol/g wet weight. The mean level of Pi generated following stimulation to exhaustion was 10.1 μmol/g more in normal than in depleted strips. It is concluded that no significant additional energy stores such as phosphorylated Gp are readily available for contraction in muscles depleted of creatine by Gp treatment.


2021 ◽  
Author(s):  
◽  
Carolann Schack

<p>Modularity is a fundamental concept in biology. Most taxa within the colonial invertebrate phylum Bryozoa have achieved division of labor through the development of specialized modules (polymorphs), and this group is perhaps the most outstanding exemplar of the phenomenon. This thesis addresses several gaps in the literature concerning the morphology, ecology, energetics, and evolvability of bryozoan polymorphism.  It has been over 40 years since the last review of bryozoan polymorphism, and here I provide a comprehensive update that describes the diversity, morphology, and function of bryozoan polymorphs and the significance of modularity to their evolutionary success. While the degree of module compartmentalization is important for the evolution of polymorphism in bryozoans, this does not appear to be the case for other colonial invertebrates.  To facilitate data collection, I developed a classification system for polymorphism in cheilostome bryozoans. While classification systems exist for bryozoan colony form, the system presented here is the first developed for polymorphism. This system is fully illustrated and non-hierarchical, enabling swift classification and statistical comparisons at many levels of detail.  Understanding community assembly is a key goal in community ecology, but previous work on bryozoan communities has focused on colony form rather than polymorphism. Environmental filtering influences community assembly by excluding ill-adapted species, resulting in communities with similar functional traits. An RLQ (a four-way ordination) analysis incorporating spatial data was run on a dataset of 642 species of cheilostomes from 779 New Zealand sites, to investigate environmental filtering of colony form and zooid polymorphism. This revealed environmental filtering of colony form: encrusting-cemented taxa were predominant in shallow environments with hard substrata (200 m). Furthermore, erect taxa found in shallow environments with high current speeds were typically jointed. Surprisingly, polymorphism also followed environmental gradients. External ovicells (brood chambers) were more common in deeper, low oxygen water than immersed and internal ovicells. This may reflect the oxygen needs of the embryo or increased predation intensity in shallow environments. Bryozoans with costae (rib-like spines) tended to be found in deeper water as well, while bryozoans with calcified frontal shields were found in shallow environments with a higher concentration of CaCO₃. Avicularia (defensive grasping structures) were not related to environmental conditions, and changes in pivot bar structure with depth likely represent a phylogenetic signal. Factors influencing community assembly were somewhat partitioned by levels of organization, since colony form responds to environmental conditions, while the effects of evolutionary history, predation, and environmental conditions were not well-separated for zooid-level morphology. Finally, rootlets may have been a key innovation that allowed cementing taxa to escape hard substrata, potentially contributing to the cheilostome radiation.  Despite the diversity of life on earth, many morphologies have not been achieved. Morphology can be limited by a variety of constraints (developmental, historical, biomechanical) and comparing the distribution of realized forms in a theoretical form-space (i.e. “morphospace”) can highlight which constraints are at play and potential functions. If traits cluster around biomechanical optima, then morphology may be shaped by strong selective pressures. In contrast, a well-explored (filled) morphospace suggests weak constraints and high morphological evolvability. Here, constraints on morphospace exploration were examined for 125 cheilostome bryozoan species from New Zealand. The mandible morphospaces for avicularia (beak-like polymorphs) were visualized using Coordinate-Point Extended Eigenshape analysis. Mechanical advantage, moment of inertia, drag, peak force, and rotational work required to close the mandible were calculated for theoretical (n=47) and real mandibles (n=224) to identify biomechanical optima. The volume and surface of area of the parcel of water passed through by the closing mandible (referred to as the “domain”) was also calculated. The theoretical morphospace of avicularia is well-explored, suggesting they are highly evolvable and have relaxed developmental constraints. However, there may be constraints within lineages. A well-developed fulcrum (complete pivot bar) may be an evolutionary pre/corequisite to evolving mandibles with extreme moments of inertia such as setose and highly spathulate forms. The most common mandible shape, triangular, represents a trade-off between maximizing domain size, minimizing energetic cost (force and construction material), and minimizing the potential for breakage. This suggests that they are well suited for catching epibionts, representing the first empirical evidence for avicularian function. Tendon length and mechanical advantage are limited by tendon width, which itself is constrained by the base width of the mandible. This explains the low mechanical advantage of setose mandibles and suggests that they are unable to grasp epibionts. The calories required to close the mandible of an avicularium (estimated from rotational work) are quite small (1.24 x 10⁻¹⁶ to 8.82 x 10⁻¹¹ cal).  Overall, this thesis highlights the complexity of bryozoan polymorphism and suggests cheilostome avicularia could provide a unique evolutionary system to study due to their apparent lack of strong developmental constraints. Future studies into the ecology of polymorphism should focus on the degree of investment (polymorph abundance within a colony) rather than presence or absence.</p>


2017 ◽  
Author(s):  
Abdel H. Halloway ◽  
Christopher J. Whelan ◽  
Çağan H. Şekercioğlu ◽  
Joel S. Brown

AbstractAdaptations can be thought of as evolutionary technologies which allow an organism to exploit environments. Among convergent taxa, adaptations may be largely equivalent with the taxa operating in a similar set of environmental conditions, divergent with the taxa operating in different sets of environmental conditions, or superior with one taxon operating within an extended range of environmental conditions than the other. With this framework in mind, we sought to characterize the adaptations of two convergent nectarivorous bird families, the New World hummingbirds (Trochilidae) and Old World sunbirds (Nectariniidae), by comparing their biogeography. Looking at their elevational and latitudinal gradients, hummingbirds not only extend into but also maintain species richness in more extreme environments. We suspect that hummingbirds have a superior key adaptation that sunbirds lack, namely a musculoskeletal architecture that allows for hovering. Through biogeographic comparisons, we have been able to assess and understand adaptations as evolutionary technologies among two convergent bird families, a process that should work for most taxa.


mSystems ◽  
2018 ◽  
Vol 3 (1) ◽  
Author(s):  
Collin M. Timm ◽  
Kelsey R. Carter ◽  
Alyssa A. Carrell ◽  
Se-Ran Jun ◽  
Sara S. Jawdy ◽  
...  

The identification of a common “stress microbiome” indicates tightly controlled relationships between the plant host and bacterial associates and a conserved structure in bacterial communities associated with poplar trees under different growth conditions. The ability of the microbiome to buffer the plant from extreme environmental conditions coupled with the conserved stress microbiome observed in this study suggests an opportunity for future efforts aimed at predictably modulating the microbiome to optimize plant growth.


2012 ◽  
Vol 78 (9) ◽  
pp. 3495-3499 ◽  
Author(s):  
Alexandre B. de Menezes ◽  
James E. McDonald ◽  
Heather E. Allison ◽  
Alan J. McCarthy

ABSTRACTThe relative abundance of micromonosporas in the bacterial communities inhabiting cellulose baits, water columns, and sediments of two freshwater lakes was determined by quantitative PCR (qPCR) of reverse-transcribed 16S rRNA.Micromonosporaspp. were shown to be significant members of the active bacterial population colonizing cellulosic substrates in the lake sediment, and their increased prevalence with greater depth was confirmed by enumeration of CFU.


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