scholarly journals Hyperspectral tree crown classification using the multiple instance adaptive cosine estimator

2018 ◽  
Author(s):  
Sheng Zou ◽  
Paul Gader ◽  
Alina Zare
Keyword(s):  
Remote Sensing ◽  
Data Analysis ◽  
Tree Species ◽  
Tree Crown ◽  
Species Classification ◽  
Ecological Information ◽  
Tree Species Classification ◽  
Testing Data ◽  
Ace Algorithm ◽  
Species Variability

Tree species classification using hyperspectral imagery is a challenging task due to the high spectral similarity between species and large intra-species variability. This paper proposes a solution using the Multiple Instance Adaptive Cosine Estimator (MI-ACE) algorithm. MI-ACE estimates a discriminative target signature to differentiate between a pair of tree species while accounting for label uncertainty. Additionally, the performance of MI-ACE does not rely on parameter settings that require tuning resulting in a method that is easy to use in application. Results presented are using training and testing data provided by a data analysis competition aimed at encouraging the development of methods for extracting ecological information through remote sensing obtained through participation in the competition.

scholarly journals Hyperspectral tree crown classification using the multiple instance adaptive cosine estimator

2018 ◽  
Author(s):  
Sheng Zou ◽  
Paul Gader ◽  
Alina Zare
Keyword(s):  
Remote Sensing ◽  
Data Analysis ◽  
Tree Species ◽  
Tree Crown ◽  
Species Classification ◽  
Ecological Information ◽  
Tree Species Classification ◽  
Testing Data ◽  
Ace Algorithm ◽  
Species Variability

Tree species classification using hyperspectral imagery is a challenging task due to the high spectral similarity between species and large intra-species variability. This paper proposes a solution using the Multiple Instance Adaptive Cosine Estimator (MI-ACE) algorithm. MI-ACE estimates a discriminative target signature to differentiate between a pair of tree species while accounting for label uncertainty. Additionally, the performance of MI-ACE does not rely on parameter settings that require tuning resulting in a method that is easy to use in application. Results presented are using training and testing data provided by a data analysis competition aimed at encouraging the development of methods for extracting ecological information through remote sensing obtained through participation in the competition.

scholarly journals Individual tree crown delineation and tree species classification with hyperspectral and LiDAR data

PeerJ ◽  
2019 ◽  
Vol 6 ◽  
pp. e6227 ◽  
Author(s):  
Michele Dalponte ◽  
Lorenzo Frizzera ◽  
Damiano Gianelle
Keyword(s):  
Remote Sensing ◽  
Tree Species ◽  
Data Science ◽  
Remote Sensing Data ◽  
Tree Crown ◽  
Species Classification ◽  
Individual Tree ◽  
Sensing Data ◽  
Tree Species Classification ◽  
Selection Of

An international data science challenge, called National Ecological Observatory Network—National Institute of Standards and Technology data science evaluation, was set up in autumn 2017 with the goal to improve the use of remote sensing data in ecological applications. The competition was divided into three tasks: (1) individual tree crown (ITC) delineation, for identifying the location and size of individual trees; (2) alignment between field surveyed trees and ITCs delineated on remote sensing data; and (3) tree species classification. In this paper, the methods and results of team Fondazione Edmund Mach (FEM) are presented. The ITC delineation (Task 1 of the challenge) was done using a region growing method applied to a near-infrared band of the hyperspectral images. The optimization of the parameters of the delineation algorithm was done in a supervised way on the basis of the Jaccard score using the training set provided by the organizers. The alignment (Task 2) between the delineated ITCs and the field surveyed trees was done using the Euclidean distance among the position, the height, and the crown radius of the ITCs and the field surveyed trees. The classification (Task 3) was performed using a support vector machine classifier applied to a selection of the hyperspectral bands and the canopy height model. The selection of the bands was done using the sequential forward floating selection method and the Jeffries Matusita distance. The results of the three tasks were very promising: team FEM ranked first in the data science competition in Task 1 and 2, and second in Task 3. The Jaccard score of the delineated crowns was 0.3402, and the results showed that the proposed approach delineated both small and large crowns. The alignment was correctly done for all the test samples. The classification results were good (overall accuracy of 88.1%, kappa accuracy of 75.7%, and mean class accuracy of 61.5%), although the accuracy was biased toward the most represented species.

scholarly journals Hyperspectral tree crown classification using the multiple instance adaptive cosine estimator

PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e6405
Author(s):  
Sheng Zou ◽  
Paul Gader ◽  
Alina Zare
Keyword(s):  
Tree Species ◽  
Classification Accuracy ◽  
Ground Truth ◽  
Majority Voting ◽  
Training Data ◽  
Cross Entropy ◽  
Tree Crown ◽  
Species Classification ◽  
Testing Data ◽  
Ace Algorithm

Tree species classification using hyperspectral imagery is a challenging task due to the high spectral similarity between species and large intra-species variability. This paper proposes a solution using the Multiple Instance Adaptive Cosine Estimator (MI-ACE) algorithm. MI-ACE estimates a discriminative target signature to differentiate between a pair of tree species while accounting for label uncertainty. Multi-class species classification is achieved by training a set of one-vs-one MI-ACE classifiers corresponding to the classification between each pair of tree species and a majority voting on the classification results from all classifiers. Additionally, the performance of MI-ACE does not rely on parameter settings that require tuning resulting in a method that is easy to use in application. Results presented are using training and testing data provided by a data analysis competition aimed at encouraging the development of methods for extracting ecological information through remote sensing obtained through participation in the competition. The experimental results using one-vs-one MI-ACE technique composed of a hierarchical classification, where a tree crown is first classified to one of the genus classes and one of the species classes. The species-level rank-1 classification accuracy is 86.4% and cross entropy is 0.9395 on the testing data, provided by the competition organizer, without the release of ground truth for testing data. Similarly, the same evaluation metrics are computed on the training data, where the rank-1 classification accuracy is 95.62% and the cross entropy is 0.2649. The results show that the presented approach can not only classify the majority species classes, but also classify the rare species classes.

scholarly journals CROWN-LEVEL TREE SPECIES CLASSIFICATION USING INTEGRATED AIRBORNE HYPERSPECTRAL AND LIDAR REMOTE SENSING DATA

2018 ◽  
Vol XLII-3 ◽  
pp. 2629-2634
Author(s):  
Z. Wang ◽  
J. Wu ◽  
Y. Wang ◽  
X. Kong ◽  
H. Bao ◽  
...  
Keyword(s):  
Remote Sensing ◽  
Tree Species ◽  
Remote Sensing Data ◽  
Lidar Data ◽  
Tree Crown ◽  
Species Classification ◽  
Individual Tree ◽  
Sensing Data ◽  
Tree Species Classification ◽  
Shape Characteristics

Mapping tree species is essential for sustainable planning as well as to improve our understanding of the role of different trees as different ecological service. However, crown-level tree species automatic classification is a challenging task due to the spectral similarity among diversified tree species, fine-scale spatial variation, shadow, and underlying objects within a crown. Advanced remote sensing data such as airborne Light Detection and Ranging (LiDAR) and hyperspectral imagery offer a great potential opportunity to derive crown spectral, structure and canopy physiological information at the individual crown scale, which can be useful for mapping tree species. In this paper, an innovative approach was developed for tree species classification at the crown level. The method utilized LiDAR data for individual tree crown delineation and morphological structure extraction, and Compact Airborne Spectrographic Imager (CASI) hyperspectral imagery for pure crown-scale spectral extraction. Specifically, four steps were include: 1) A weighted mean filtering method was developed to improve the accuracy of the smoothed Canopy Height Model (CHM) derived from LiDAR data; 2) The marker-controlled watershed segmentation algorithm was, therefore, also employed to delineate the tree-level canopy from the CHM image in this study, and then individual tree height and tree crown were calculated according to the delineated crown; 3) Spectral features within 3 × 3 neighborhood regions centered on the treetops detected by the treetop detection algorithm were derived from the spectrally normalized CASI imagery; 4) The shape characteristics related to their crown diameters and heights were established, and different crown-level tree species were classified using the combination of spectral and shape characteristics. Analysis of results suggests that the developed classification strategy in this paper (OA = 85.12 %, Kc = 0.90) performed better than LiDAR-metrics method (OA = 79.86 %, Kc = 0.81) and spectral-metircs method (OA = 71.26, Kc = 0.69) in terms of classification accuracy, which indicated that the advanced method of data processing and sensitive feature selection are critical for improving the accuracy of crown-level tree species classification.

scholarly journals The Effect of Topographic Correction on Forest Tree Species Classification Accuracy

2020 ◽  
Vol 12 (5) ◽  
pp. 787
Author(s):  
Chao Dong ◽  
Gengxing Zhao ◽  
Yan Meng ◽  
Baihong Li ◽  
Bo Peng
Keyword(s):  
Remote Sensing ◽  
Tree Species ◽  
Forest Tree ◽  
Species Classification ◽  
Illumination Condition ◽  
Topographic Correction ◽  
Forest Tree Species ◽  
Tree Species Classification ◽  
Inconsistency Rate ◽  
Rotation Model

Topographic correction can reduce the influences of topographic factors and improve the accuracy of forest tree species classification when using remote-sensing data to investigate forest resources. In this study, the Mount Taishan forest farm is the research area. Based on Landsat 8 OLI data and field survey subcompartment data, four topographic correction models (cosine model, C model, solar-canopy-sensor (SCS)+C model and empirical rotation model) were used on the Google Earth Engine (GEE) platform to carry out algorithmic data correction. Then, the tree species in the study area were classified by the random forest method. Combined with the tree species classification process, the topographic correction effects were analyzed, and the effects, advantages and disadvantages of each correction model were evaluated. The results showed that the SCS+C model and empirical rotation model were the best models in terms of visual effect, reducing the band standard deviation and adjusting the reflectance distribution. When we used the SCS+C model to correct the remote-sensing image, the total accuracy increased by 4% when using the full-coverage training areas to classify tree species and by nearly 13% when using the shadowless training area. In the illumination condition interval of 0.4–0.6, the inconsistency rate decreased significantly; however, the inconsistency rate increased with increasing illumination condition values. Topographic correction can enhance reflectance information in shaded areas and can significantly improve the image quality. Topographic correction can be used as a pretreatment method for forest species classification when the study area’s dominant tree species are in a low light intensity area.

Tree crown delineation and tree species classification in boreal forests using hyperspectral and ALS data

2014 ◽  
Vol 140 ◽  
pp. 306-317 ◽  
Author(s):  
Michele Dalponte ◽  
Hans Ole Ørka ◽  
Liviu Theodor Ene ◽  
Terje Gobakken ◽  
Erik Næsset
Keyword(s):  
Tree Species ◽  
Boreal Forests ◽  
Tree Crown ◽  
Species Classification ◽  
Tree Species Classification ◽  
Crown Delineation ◽  
Tree Crown Delineation

scholarly journals Urban Tree Species Classification Using a WorldView-2/3 and LiDAR Data Fusion Approach and Deep Learning

Sensors ◽  
2019 ◽  
Vol 19 (6) ◽  
pp. 1284 ◽  
Author(s):  
Sean Hartling ◽  
Vasit Sagan ◽  
Paheding Sidike ◽  
Maitiniyazi Maimaitijiang ◽  
Joshua Carron
Keyword(s):  
Remote Sensing ◽  
Deep Learning ◽  
Tree Species ◽  
Training Sample ◽  
Lidar Data ◽  
Species Classification ◽  
Individual Tree ◽  
Urban Tree ◽  
Tree Species Classification ◽  
Fusion Approach

Urban areas feature complex and heterogeneous land covers which create challenging issues for tree species classification. The increased availability of high spatial resolution multispectral satellite imagery and LiDAR datasets combined with the recent evolution of deep learning within remote sensing for object detection and scene classification, provide promising opportunities to map individual tree species with greater accuracy and resolution. However, there are knowledge gaps that are related to the contribution of Worldview-3 SWIR bands, very high resolution PAN band and LiDAR data in detailed tree species mapping. Additionally, contemporary deep learning methods are hampered by lack of training samples and difficulties of preparing training data. The objective of this study was to examine the potential of a novel deep learning method, Dense Convolutional Network (DenseNet), to identify dominant individual tree species in a complex urban environment within a fused image of WorldView-2 VNIR, Worldview-3 SWIR and LiDAR datasets. DenseNet results were compared against two popular machine classifiers in remote sensing image analysis, Random Forest (RF) and Support Vector Machine (SVM). Our results demonstrated that: (1) utilizing a data fusion approach beginning with VNIR and adding SWIR, LiDAR, and panchromatic (PAN) bands increased the overall accuracy of the DenseNet classifier from 75.9% to 76.8%, 81.1% and 82.6%, respectively. (2) DenseNet significantly outperformed RF and SVM for the classification of eight dominant tree species with an overall accuracy of 82.6%, compared to 51.8% and 52% for SVM and RF classifiers, respectively. (3) DenseNet maintained superior performance over RF and SVM classifiers under restricted training sample quantities which is a major limiting factor for deep learning techniques. Overall, the study reveals that DenseNet is more effective for urban tree species classification as it outperforms the popular RF and SVM techniques when working with highly complex image scenes regardless of training sample size.

scholarly journals Continental-scale Hyperspectral tree species classification in the National Ecological Observatory Network

2021 ◽  
Author(s):  
Sergio Marconi ◽  
Ben G Weinstein ◽  
Sheng Zou ◽  
Stephanie Ann Bohlman ◽  
Alina Zare ◽  
...  
Keyword(s):  
Remote Sensing ◽  
Tree Species ◽  
General Model ◽  
Classification Accuracy ◽  
Tree Level ◽  
Species Classification ◽  
Site Specific ◽  
Continental Scale ◽  
Tree Species Classification ◽  
The Us

Advances in remote sensing imagery and computer vision applications unlock the potential for developing algorithms to classify individual trees from remote sensing at unprecedented scales. However, most approaches to date focus on site-specific applications and a small number of taxonomic groups. This limitation makes it hard to evaluate whether these approaches generalize well across broader geographic areas and ecosystems. Leveraging field surveys and hyperspectral remote sensing data from the National Ecological Observatory Network (NEON), we developed a continental extent model for tree species classification that can be applied to the entire network including a wide range of US terrestrial ecosystems. We compared the performance of the generalized approach to models trained at each individual site, evaluating advantages and challenges posed by training species classifiers at the US scale. We evaluated the effect of geography, environmental, and ecological conditions on the accuracy and precision of species predictions. On average, the general model resulted in good overall classification accuracy (micro-F1 score), with better accuracy than site-specific classifiers (average individual tree level accuracy of 0.77 for the general model and 0.72 for site-specific models). Aggregating species to the genus-level increased accuracy to 0.83. Regions with more species exhibited lower classification accuracy. Trees were more likely to be confused with congeneric and co-occurring species and confusion was highest for trees with structural damage and in complex closed-canopy forests. The model produced accurate estimates of uncertainty, correctly identifying trees where confusion was likely. Using only data from NEON this single integrated classifier can make predictions for 20% of all tree species found in forest ecosystems across the US, suggesting the potential for broad scale general models for species classification from hyperspectral imaging.

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