scholarly journals Morphological and Molecular Characterization of Alternaria Species Isolated from Different Plants

2021 ◽  
pp. 61-71
Author(s):  
Pooja Singh ◽  
Sushma Nema ◽  
Keerti Tantwai
Keyword(s):  
Infected Plant ◽  
Alternaria Brassicicola ◽  
Leaf Spots ◽  
The Family ◽  
Ctab Method ◽  
Alternaria Species ◽  
Alternaria Sp ◽  
Thermal Cycler ◽  
Almost All

Alternaria belongs to the family of Pleosporaceae, the order of Pleosporales, the class of Dothideomycetes in the phyllum of Ascomycota. This fungal genus is characterized by its ability to produce a number of enzymes able to injured many types of crops. The symptoms of Alternaria blight on different agricultural crops such as cabbage, cauliflower, coriander, fenugreek, brinjal, onion, faba bean, dahlia, dracaena, hollyhock, carrot, marigold, tomato and wheat were observed. Alternaria produces distinctive "bulls eye" patterned leaf spots in almost all the infected plants. Nineteen Alternaria isolates were obtained from fourteen infected plant samples. The observations were recorded from the seven day old culture for colony characteristics on PDA. Based on morphology 10 isolates of Alternaria alternata, two isolates Alternaria tenuissima and Alternaria longipes and one Alternaria porri, Alternaria brassicae, Alternaria brassicicola and Alternaria sp. were identified. Alternaria species grow rapidly and produced flat, downy to woolly grayish green to black colonies. All the isolates exhibited characteristics dark-coloured multicelled conidia with longitudinal and transverse septa (phaeo-dictyospores) and a beak or tapering apical cells. DNA isolation of all isolates of Alternaria was carried out using CTAB method. Isolated DNA was subjected to amplification with ITS1 and ITS4 primers in a thermal cycler. The amplified products ranged from 580-600bp. These amplified products were sequenced and identify the species of different Alternaria isolates using BLASTn in NCBI online. All the sequences were published in NCBI public domain. The resulting sequences of all isolates were compared to other sequences in the GenBank as 90-100% identical. Genetic variability was conducted by phylogenetic analysis.

scholarly journals Functional and Structural Characterization of a Novel Isoamylase from Ostreococcus tauri and Role of the N-Terminal Domain

2020 ◽  
Vol 14 (1) ◽  
pp. 1-11
Author(s):  
Nicolas Hedín ◽  
Julieta Barchiesi ◽  
Diego F. Gomez-Casati ◽  
María V. Busi
Keyword(s):  
Crystallization Process ◽  
Biochemical Characterization ◽  
Carbohydrate Binding ◽  
Amino Acid Residues ◽  
Photosynthetic Organisms ◽  
Ostreococcus Tauri ◽  
The Family ◽  
Almost All

Background: The debranching starch enzymes, isoamylase 1 and 2 are well-conserved enzymes present in almost all the photosynthetic organisms. These enzymes are involved in the crystallization process of starch and are key components which remove misplaced α-1,6 ramifications on the final molecule. Aim: In this work, we performed a functional and structural study of a novel isoamylase from Ostreococcus tauri. Methods: We identified conserved amino acid residues possibly involved in catalysis. We also identified a region at the N-terminal end that resembles a Carbohydrate Binding Domain (CBM), which is more related to the family CBM48, but has no spatial conservation of the residues involved in carbohydrate binding. Results: The cloning, expression and biochemical characterization of this N-terminal region confirmed that it binds to polysaccharides, showing greater capacity for binding to amylopectin rather than total starch or amylose. Conclusion: This module could be a variant of the CBM48 family or it could be classified within a new CBM family.

scholarly journals Karyotypic characterization of Prochilodus mariae, Semaprochilodus kneri and S. laticeps(Teleostei: Prochilodontidae) from Caicara del Orinoco, Venezuela

2003 ◽  
Vol 1 (1) ◽  
pp. 47-52 ◽  
Author(s):  
Claudio Oliveira ◽  
Mauro Nirchio ◽  
Ángel Granado ◽  
Sara Levy
Keyword(s):  
Chromosome Number ◽  
Chromosome Pair ◽  
Nucleolus Organizer ◽  
Single Chromosome ◽  
Nucleolus Organizer Regions ◽  
The Family ◽  
Structural Chromosome ◽  
Almost All ◽  
Freshwater Environments

Fish of the family Prochilodontidae are considered one of the most important components of commercial and subsistence fishery in freshwater environments in South America. This family consists of 21 species and three genera. In the present study, the karyotypes of Prochilodus mariae, Semaprochilodus kneri, and S. laticeps from Caicara del Orinoco, Bolivar State, Venezuela were studied. The species P. mariae, S. kneri and S. laticeps exhibited 2n=54 chromosomes (40 metacentric and 14 submetacentric), a single chromosome pair with nucleolus organizer regions, and a large amount of heterochromatin found at centromeric and pericentromeric positions in almost all chromosomes. The P. mariae specimens studied displayed 0 to 3 supernumerary microchromosomes. The data obtained here confirm the conservative nature of the chromosome number and morphology of Prochilodontidae and reinforce the hypothesis that small structural chromosome rearrangements were the main cause of the karyotypic diversification seen in this group.

scholarly journals Survey and prevalence of species causing Alternaria leaf spots on brassica species in Pernambuco

2012 ◽  
Vol 30 (2) ◽  
pp. 345-348 ◽  
Author(s):  
Sami J Michereff ◽  
Marissônia A Noronha ◽  
Maria S Xavier Filha ◽  
Marcos PS Câmara ◽  
Ailton Reis
Keyword(s):  
Chinese Cabbage ◽  
Brassica Species ◽  
Alternaria Brassicicola ◽  
Leaf Spot Disease ◽  
Vegetable Crops ◽  
Growing Seasons ◽  
Leaf Spots ◽  
Brassica Crops ◽  
Brassicaceae Species ◽  
Alternaria Species

Brassicaceae family comprises plant species that are very important as vegetable crops, such as the species complex Brassica oleracea and Brassica rapa. Alternaria brassicicola and A. brassicae are among the most important pathogens of Brassicaceae causing Alternaria leaf spot disease. The occurrence and prevalence of Alternaria species causing leaf spots in brassica crops in Pernambuco was acessed, as well as the existence of a possible preference by vegetable host for these pathogens. Twenty-eight fields were surveyed in the Agreste region of Pernambuco state, in the 2005 and 2006 growing seasons. In each year, 10 Chinese cabbage, six cabbage, six cauliflower and six broccoli fields were visited. In each field, 50 leaves showing at least five lesions were randomly collected. Species identification was performed taking into account morphology of the conidia that was compared with literature data. Among the two Alternaria species found, A. brassicae was found in all Chinese cabbage fields while A. brassicicola was found in all fields of cabbage, cauliflower and broccoli. Overall, A. brassicicola was more prevalent than A. brassicae. In Chinese cabbage there was predominance of A. brassicae, with mean prevalence of 91.0% and 96.5% in 2005 and 2006. On the other hand, in broccoli and cabbage there was high predominance of A. brassicicola, with mean prevalence between 95.1% and 99.8%. In cauliflower, although the prevalence has been of A. brassicicola, high frequency of A. brassicae was noted. The frequency of co-occurrence of both Alternaria species was very low. The results of this study reinforce the hypothesis of existence of host preference within species of Alternaria that cause leaf spots in brassica crops, especially when Chinese cabbage, broccoli and cabbage are considered. This information is critical to developing strategies for managing Alternaria leaf spots in Brassicaceae species.

Prothrombin Metz : Purification and Characterization of a Variant of Human Prothrombin

1979 ◽  
Author(s):  
M Ribieto ◽  
J Elion ◽  
D Labie ◽  
F Josso
Keyword(s):  
Molecular Weight ◽  
Gel Electrophoresis ◽  
Polyacrylamide Gel Electrophoresis ◽  
Factor Xa ◽  
Polyacrylamide Gel ◽  
Cleavage Pattern ◽  
Purification And Characterization ◽  
Double Immunodiffusion ◽  
The Family

For the purification of the abnormal prothrombin (Pt Metz), advantage has been taken of the existence in the family of three siblings who, being double heterozygotes for Pt Metz and a hypoprothrombinemia, have no normal Pt. Purification procedures included barium citrate adsorption and chromatography on DEAE Sephadex as for normal Pt. As opposed to some other variants (Pt Barcelona and Madrid), Pt Metz elutes as a single symetrical peak. By SDS polyacrylamide gel electrophoresis, this material is homogeneous and appears to have the same molecular weight as normal Pt. Comigration of normal and abnormal Pt in the absence of SDS, shows a double band suggesting an abnormal charge for the variant. Pt Metz exhibits an identity reaction with the control by double immunodiffusion. Upon activation by factor Xa, Pt Metz can generate amydolytic activity on Bz-Phe-Val-Arg-pNa (S2160), but only a very low clotting activity. Clear abnormalities are observed in the cleavage pattern of Pt Metz when monitored by SDS gel electrophoresis. The main feature are the accumulation of prethrombin l (Pl) and the appearance of abnormal intermediates migrating faster than Pl.

Analisis Perbandingan Manajemen Keuangan Ojek Online Dan Ojek Reguler Studi Kasus Kecamatan Duren Sawit Jakarta Timur

Liquidity ◽  
2018 ◽  
Vol 7 (1) ◽  
pp. 41-52
Author(s):  
M. Koesmawan ◽  
Darwin Erhandy ◽  
Dede Dahlan
Keyword(s):  
Financial Management ◽  
Average Income ◽  
Savings And Loans ◽  
Financial Difficulties ◽  
The Family ◽  
Family Finances ◽  
The Subject ◽  
Almost All

In order to meet the needs of living which consists of primary as well as secondary needs, human can work in either a formal or an informal job. One of the informal jobs that is became the subject of this research was to become an ojek driver. Ojek is a ranting motorcycle.  Revenue of ojek drivers, accordingly, should be well managed following the concept of financial management. This research was conducted for the driver of the online motorcycle drivers as well as the regular motorcycle drivers they are called “The Ojek”. Ojek’s location is in Kecamatan (subdistrict) Duren Sawit, East Jakarta with 70 drivers of ojeks. The online ojeks earn an average of Rp 100,000 per day, can save Rp 11,000 to 21,000 per day, while, the regular ojek has an average income per day slightly lower amounted to Rp 78,500, this kind of ojeks generally have other businesses and always record the outflow of theirs money. Both the online and regular ojeks feel a tight competition in getting passengers, but their income can help the family finances and both ojeks want a cooperative especially savings and loans, especially to overcome the urgent financial difficulties. Almost all rivers, do not dare to borrow money. They are afraid of can not refund the money as scheduled.

A Thorough Theoretical Exploration of Intriguing Characteristics of Cyclo[18]carbon: Geometry, Bonding Nature, Aromaticity, Weak Interaction, Reactivity, Excited States, Vibrations, Molecular Dynamics and Various Molecular Properties

2019 ◽  
Author(s):  
Tian Lu ◽  
Qinxue Chen ◽  
Zeyu Liu
Keyword(s):  
Molecular Dynamics ◽  
Excited States ◽  
Electronic Excitation ◽  
Ring Structure ◽  
Molecular Properties ◽  
Molecular Vibration ◽  
Full Characterization ◽  
Long Time ◽  
Almost All

Although cyclo[18]carbon has been theoretically and experimentally investigated since long time ago, only very recently it was prepared and directly observed by means of STM/AFM in condensed phase (Kaiser et al., <i>Science</i>, <b>365</b>, 1299 (2019)). The unique ring structure and dual 18-center π delocalization feature bring a variety of unusual characteristics and properties to the cyclo[18]carbon, which are quite worth to be explored. In this work, we present an extremely comprehensive and detailed investigation on almost all aspects of the cyclo[18]carbon, including (1) Geometric characteristics (2) Bonding nature (3) Electron delocalization and aromaticity (4) Intermolecular interaction (5) Reactivity (6) Electronic excitation and UV/Vis spectrum (7) Molecular vibration and IR/Raman spectrum (8) Molecular dynamics (9) Response to external field (10) Electron ionization, affinity and accompanied process (11) Various molecular properties. We believe that our full characterization of the cyclo[18]carbon will greatly deepen researchers' understanding of this system, and thereby help them to utilize it in practice and design its various valuable derivatives.

A Thorough Theoretical Exploration of Intriguing Characteristics of Cyclo[18]carbon: Geometry, Bonding Nature, Aromaticity, Weak Interaction, Reactivity, Excited States, Vibrations, Molecular Dynamics and Various Molecular Properties

2019 ◽  
Author(s):  
Tian Lu ◽  
Qinxue Chen ◽  
Zeyu Liu
Keyword(s):  
Molecular Dynamics ◽  
Excited States ◽  
Electronic Excitation ◽  
Ring Structure ◽  
Molecular Properties ◽  
Molecular Vibration ◽  
Full Characterization ◽  
Long Time ◽  
Almost All

Although cyclo[18]carbon has been theoretically and experimentally investigated since long time ago, only very recently it was prepared and directly observed by means of STM/AFM in condensed phase (Kaiser et al., <i>Science</i>, <b>365</b>, 1299 (2019)). The unique ring structure and dual 18-center π delocalization feature bring a variety of unusual characteristics and properties to the cyclo[18]carbon, which are quite worth to be explored. In this work, we present an extremely comprehensive and detailed investigation on almost all aspects of the cyclo[18]carbon, including (1) Geometric characteristics (2) Bonding nature (3) Electron delocalization and aromaticity (4) Intermolecular interaction (5) Reactivity (6) Electronic excitation and UV/Vis spectrum (7) Molecular vibration and IR/Raman spectrum (8) Molecular dynamics (9) Response to external field (10) Electron ionization, affinity and accompanied process (11) Various molecular properties. We believe that our full characterization of the cyclo[18]carbon will greatly deepen researchers' understanding of this system, and thereby help them to utilize it in practice and design its various valuable derivatives.

Physicochemical and bacteriological characterization of hospital effluents and their impact on the environment

2019 ◽  
Author(s):  
Chem Int
Keyword(s):  
Human Health ◽  
Fecal Coliforms ◽  
Chemical Pollution ◽  
Hospital Effluents ◽  
Biological Contaminants ◽  
Almost All ◽  
Direct Discharge ◽  
Significant Chemical

Liquid effluents discharged by hospitals may contain chemical and biological contaminants whose main source is the different substances used for the treatment of patients. This type of rejection can present a sanitary potentially dangerous risk for human health and can provoke a strong degradation of diverse environmental compartments mainly water and soils. The present study focuses on the quality of the liquid effluents of Hassani Abdelkader’s hospital of Sidi Bel-Abbes (West of Algeria). The results reveal a significant chemical pollution (COD: 879 mgO2/L, BOD5: 850 mgO2/L, NH4+ : 47.9 mg/l, NO2- : 4.2 mg/l, NO3- : 56.8 mg/l with respect to WHO standard of 90 mgO2/L, 30 mgO2/L, 0.5 mg/l, 1 mg/l and 1 mg/l respectively). However, these effluents are biodegradable since the ratio COD/BOD5 do not exceeded the value of 2 in almost all samples. The presence of pathogen germs is put into evidence such as pseudomonas, the clostridium, the staphylococcus, the fecal coliforms and fecal streptococcus. These results show that the direct discharge of these effluents constitutes a major threat to human health and the environment.

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