Shearing Effects on the Phase Coarsening of Binary Mixtures Using the Active Model B

The phase separation of a two-dimensional active binary mixture is studied under the action of an applied shear through numerical simulations. It is highlighted how the strength of the external flow modifies the initial shape of growing domains. The activity is responsible for the formation of isolated droplets which affect both the coarsening dynamics and the morphology of the system. The characteristic dimensions of domains along the flow and the shear direction are modulated in time by oscillations whose amplitudes are reduced when the activity increases. This induces a broadening of the distribution functions of domain lengths with respect to the passive case due to the presence of dispersed droplets of different sizes.

Condensation of SIP Particles and Sticky Brownian Motion

We study the symmetric inclusion process (SIP) in the condensation regime. We obtain an explicit scaling for the variance of the density field in this regime, when initially started from a homogeneous product measure. This provides relevant new information on the coarsening dynamics of condensing interacting particle systems on the infinite lattice. We obtain our result by proving convergence to sticky Brownian motion for the difference of positions of two SIP particles in the sense of Mosco convergence of Dirichlet forms. Our approach implies the convergence of the probabilities of two SIP particles to be together at time t. This, combined with self-duality, allows us to obtain the explicit scaling for the variance of the fluctuation field.

Second-order stabilized semi-implicit energy stable schemes for bubble assemblies in binary and ternary systems

<p style='text-indent:20px;'>In this paper, we propose some second-order stabilized semi-implicit methods for solving the Allen-Cahn-Ohta-Kawasaki and the Allen-Cahn-Ohta-Nakazawa equations. In the numerical methods, some nonlocal linear stabilizing terms are introduced and treated implicitly with other linear terms, while other nonlinear and nonlocal terms are treated explicitly. We consider two different forms of such stabilizers and compare the difference regarding the energy stability. The spatial discretization is performed by the Fourier collocation method with FFT-based fast implementations. Numerically, we verify the second order temporal convergence rate of the proposed schemes. In both binary and ternary systems, the coarsening dynamics is visualized as bubble assemblies in hexagonal or square patterns.</p>

Mechanical frustration of phase separation in the cell nucleus by chromatin

Liquid-liquid phase separation is a fundamental mechanism underlying subcellular organization. Motivated by the striking observation that optogenetically-generated droplets in the nucleus display suppressed coarsening dynamics, we study the impact of chromatin mechanics on droplet phase separation. We combine theory and simulation to show that crosslinked chromatin can mechanically suppress droplets’ coalescence and ripening, as well as quantitatively control their number, size, and placement. Our results highlight the role of the subcellular mechanical environment on condensate regulation.

A regularized phase-field model for faceting in a kinetically controlled crystal growth

At equilibrium, the shape of a strongly anisotropic crystal exhibits corners when for some orientations the surface stiffness is negative. In the sharp-interface problem, the surface free energy is traditionally augmented with a curvature-dependent term in order to round the corners and regularize the dynamic equations that describe the motion of such interfaces. In this paper, we adopt a diffuse interface description and present a phase-field model for strongly anisotropic crystals that is regularized using an approximation of the Willmore energy. The Allen–Cahn equation is employed to model kinetically controlled crystal growth. Using the method of matched asymptotic expansions, it is shown that the model converges to the sharp-interface theory proposed by Herring. Then, the stress tensor is used to derive the force acting on the diffuse interface and to examine the properties of a corner at equilibrium. Finally, the coarsening dynamics of the faceting instability during growth is investigated. Phase-field simulations reveal the existence of a parabolic regime, with the mean facet length evolving in t , with t the time, as predicted by the sharp-interface theory. A specific coarsening mechanism is observed: a hill disappears as the two neighbouring valleys merge.