Introduction. The contribution of
Clostridioides difficile
(formerly
Clostridium difficile
) to the burden of hospital-associated infections (HAIs) remains undetermined in many African countries.
Aim. This study aimed to identify a sensitive and readily adaptable
C. difficile
detection assay and to evaluate the
C. difficile
HAI risk in Kenya.
Methodology. Sterile swabs in neutralizing buffer were used to sample equipment or surfaces that patients and clinical staff touched frequently. These swabs were either plated directly on chromogenic agar or cultured in an enrichment broth before plating. The swab suspensions, enrichment broth and plate cultures were screened by quantitative PCR (qPCR) to determine the most efficient detection method. The HAI risk was evaluated by testing the
C. difficile
-positive samples by qPCR for the A, B and binary toxins.
Results.
C. difficile
was detected on 4/57 (7.0 %) equipment and surfaces by direct culture. The additional enrichment step increased the detection rate 10-fold to 43/57 (75.4 %). In total, 51/57 (89.5 %) environmental samples were positive for
C. difficile
detected through either culture or qPCR. The genes encoding the primary toxins, tcdA and tcdB, were detected on six surfaces, while the genes encoding the binary toxins, cdtA and cdtB, were detected on 2/57 (3.5 %) and 3/57 (5.3 %) surfaces, respectively. Different
C. difficile
toxin gene profiles were detected: the tcdA+/tcdB− gene profile on 4/10 (40 %) high-touch surfaces, tcdA−/tcdB+ on 3/10 (30 %) surfaces, tcdA+/tcdB+/cdtA+/cdtB+ on 2/10 (20 %) surfaces and tcdA−/tcdB+/cdtB+ on one high-touch surface.
Conclusion. The widespread contamination of hospital environments by toxigenic
C. difficile
gives a strong indication of the high risk of
C. difficile
infections (CDIs). The two-step culture process described can easily be adapted for monitoring hospital environment contamination by
C. difficile
.