Effective Repulsion Between Oppositely Charged Particles in Symmetrical Multivalent Salt Solutions: Effect of Salt Valence

Salt ions play critical roles in the assembly of polyelectrolytes such as nucleic acids and colloids since ions can regulate the effective interactions between them. In this work, we investigated the effective interactions between oppositely charged particles in symmetrical (z:z) salt solutions by Monte Carlo simulations with salt valence z ranging from 1 to 4. We found that the effective interactions between oppositely charged particles are attractive for 1:1 and low multivalent salts, while they become apparently repulsive for high multivalent salts. Moreover, such effective repulsion becomes stronger as z increases from 2 to 3, while it becomes weaker when z increases from 3 to 4. Our analyses reveal that the overall effective interactions are attributed to the interplay between ion translational entropy and electrostatic energy, and the non-monotonic salt-valence dependence of the effective repulsions is caused by the rapid decrease of attractive electrostatic energy between two oppositely charged particles with their over-condensed counterions of opposite charges when z exceeds 3. Our further MC simulations show that the involvement of local-ranged counterion–co-ion repulsions can enhance the effective repulsions through weakening the attractive electrostatic energy, especially for higher salt valence.

Looping-in complexation and ion partitioning in nonstoichiometric polyelectrolyte mixtures

A wide variety of intracellular membraneless compartments are formed via liquid-liquid phase separation of charged proteins and nucleic acids. Understanding the stability of these compartments, while accounting for the compositional heterogeneity intrinsic to cellular environments, poses a daunting challenge. We combined experimental and theoretical efforts to study the effects of nonstoichiometric mixing on coacervation behavior and accurately measured the concentrations of polyelectrolytes and small ions in the coacervate and supernatant phases. For synthetic polyacrylamides and polypeptides/DNA, with unequal mixing stoichiometry, we report a general “looping-in” phenomenon found around physiological salt concentrations, where the polymer concentrations in the coacervate initially increase with salt addition before subsequently decreasing. This looping-in behavior is captured by a molecular model that considers reversible ion binding and electrostatic interactions. Further analysis in the low-salt regime shows that the looping-in phenomenon originates from the translational entropy of counterions that are needed to neutralize nonstoichiometric coacervates.

Active coacervate droplets are protocells that grow and resist Ostwald ripening

Active coacervate droplets are liquid condensates coupled to a chemical reaction that turns over their components, keeping the droplets out of equilibrium. This turnover can be used to drive active processes such as growth, and provide an insight into the chemical requirements underlying (proto)cellular behaviour. Moreover, controlled growth is a key requirement to achieve population fitness and survival. Here we present a minimal, nucleotide-based coacervate model for active droplets, and report three key findings that make these droplets into evolvable protocells. First, we show that coacervate droplets form and grow by the fuel-driven synthesis of new coacervate material. Second, we find that these droplets do not undergo Ostwald ripening, which we attribute to the attractive electrostatic interactions and translational entropy within complex coacervates, active or passive. Finally, we show that the droplet growth rate reflects experimental conditions such as substrate, enzyme and protein concentration, and that a different droplet composition (addition of RNA) leads to altered growth rates and droplet fitness. These findings together make active coacervate droplets a powerful platform to mimic cellular growth at a single-droplet level, and to study fitness at a population level.

Entropy-controlled cross-linking in linker-mediated vitrimers

Recently developed linker-mediated vitrimers based on metathesis of dioxaborolanes with various commercially available polymers have shown both good processability and outstanding performance, such as mechanical, thermal, and chemical resistance, suggesting new ways of processing cross-linked polymers in industry, of which the design principle remains unknown [M. Röttgeret al.,Science356, 62–65 (2017)]. Here we formulate a theoretical framework to elucidate the phase behavior of the linker-mediated vitrimers, in which entropy plays a governing role. We find that, with increasing the linker concentration, vitrimers undergo a reentrant gel–sol transition, which explains a recent experiment [S. Wu, H. Yang, S. Huang, Q. Chen,Macromolecules53, 1180–1190 (2020)]. More intriguingly, at the low temperature limit, the linker concentration still determines the cross-linking degree of the vitrimers, which originates from the competition between the conformational entropy of polymers and the translational entropy of linkers. Our theoretical predictions agree quantitatively with computer simulations, and offer guidelines in understanding and controlling the properties of this newly developed vitrimer system.

Measuring Entropy in Molecular Recognition by Proteins

Molecular recognition by proteins is fundamental to the molecular basis of biology. Dissection of the thermodynamic landscape governing protein–ligand interactions has proven difficult because determination of various entropic contributions is quite challenging. Nuclear magnetic resonance relaxation measurements, theory, and simulations suggest that conformational entropy can be accessed through a dynamical proxy. Here, we review the relationship between measures of fast side-chain motion and the underlying conformational entropy. The dynamical proxy reveals that the contribution of conformational entropy can range from highly favorable to highly unfavorable and demonstrates the potential of this key thermodynamic variable to modulate protein–ligand interactions. The dynamical so-called entropy meter also refines the role of solvent entropy and directly determines the loss in rotational–translational entropy that occurs upon formation of high-affinity complexes. The ability to quantify the roles of entropy through an entropy meter based on measurable dynamical properties promises to highlight its role in protein function.