Origin of Symphyotrichum anticostense (Asteraceae: Astereae), an endemic, high polyploid species of the Gulf of St. Lawrence region, based on morphological and nrDNA evidence

Symphyotrichum anticostense (Fernald) G.L.Nesom (Asteraceae: Astereae), a rare endemic of the Gulf of St. Lawrence region is a high allopolyploid (2n=10x=80). It has been hypothesized to be derived from the hybrid between tetraploid (2n=4x=32) individuals of S. boreale (Torr. & A.Gray) Löve & Löve and the hexaploid (2n=6x=48) S. novi-belgii (L.) G.L.Nesom. We investigated this hypothesis using morphological and molecular ITS-sequence data, and we tried to determine the potentially geographic origins of the taxon. Univariate morphological analyses show that 67.5% of the S. anticostense characters are parent-like, 43.5% from S. novi-belgii and 13% from S. boreale, the remainder not differing statistically from either parent; 23.5% are intermediate; and 9% transgressive. Multivariate analyses show that S. anticostense is intermediate between its putative parents. The molecular results support the morphological data, but due to the insufficient resolution among ribotypes on the tree, a more rapidly evolving marker will be needed to ascertain more reliably the origin of S. anticostense. Besides the hypothesis of genetic drift and allele fixation following long-distance dispersals, at least three independent geographic origins may be suggested for S. anticostense; Anticosti Island, Lake St. John, and Gaspé Peninsula-New Brunswick-Maine.

Mycophagy of White-Tailed Deer (Odocoileus virginianus Zimmermann) in the Boreal Forest

Mushrooms are a little known source of food for large herbivores, but are of high quality because of their high protein content and digestibility. Approximately 50 epigeous and hypogeous mushroom and lichen species have been identified in the diet of cervids so far using macro remains. Our main objective was to determine which mushroom species are consumed by white-tailed deer (Odocoileus virginianus Zimmermann) using a molecular approach. We collected 114 fecal samples from deer harvested in 2014 and 2015 on Anticosti Island (Québec, Canada), extracted total DNA from feces, and amplified fungal DNA specifically via polymerase chain reaction. Amplified fungi DNA was then sequenced with the Illumina method to identify mushroom species consumed by deer. Our results revealed that deer harvested consumed up to 4979 fungal species, including 580 species that appeared to be consumed directly. Adults tended to consume a higher mushroom diversity than juveniles, and mushroom diversity consumed by deer was much higher in 2015 than 2014. Adult females consumed a higher mushroom diversity than males, especially lactating females. Our results contribute to the understanding of the role of mushrooms and their large diversity in white-tailed deer diet.

Precession-driven climate cycles and time scale prior to the Hirnantian glacial maximum

Paleozoic astrochronologies are limited by uncertainties in past astronomical configurations and the availability of complete stratigraphic sections with precise, independent age control. We show it is possible to reconstruct a robust Paleozoic ~104-yr-resolution astrochronology in the well-preserved and thick Upper Ordovician reference record of Anticosti Island (Canada). The clear imprint of astronomical cycles, including ~18 k.y. precession, potential obliquity, and short and long eccentricity, constrains the entire Vauréal Formation (~1 km thick) to only ~3 m.y. in total, representing ~10 times higher accumulation rates than previously suggested. This ~104 yr resolution represents an order of magnitude increase in the current standard temporal resolution for the Katian and even allows for the detection of sub-Milankovitch climate-scale variability. The loss of a clear precession signal in the uppermost Vauréal Formation might be related to contemporaneous global cooling prior to the Hirnantian glacial maximum as indicated by the δ18O record. Complementary to the study of cyclostratigraphy of longer and often simplified records, it is important to recognize stratigraphic hiatuses and complexities on the ~104 yr scale to achieve robust sub-eccentricity-scale Paleozoic astrochronologies.

Heritability Estimates of Antler and Body Traits in White-Tailed Deer (Odocoileus virginianus) From Genomic-Relatedness Matrices

Estimating heritability (h2) is required to predict the response to selection and is useful in species that are managed or farmed using trait information. Estimating h2 in free-ranging populations is challenging due to the need for pedigrees; genomic-relatedness matrices (GRMs) circumvent this need and can be implemented in nearly any system where phenotypic and genome-wide single-nucleotide polymorphism (SNP) data are available. We estimated the heritability of 5 body and 3 antler traits in a free-ranging population of white-tailed deer (Odocoileus virginianus) on Anticosti Island, Quebec, Canada. We generated classic and robust GRMs from >10,000 SNPs: hind foot length, dressed body mass, and peroneus muscle mass had high h2 values of 0.62, 0.44, and 0.55, respectively. Heritability in male-only antler features ranged from 0.07 to 0.33. We explored the influence of filtering by minor allele frequency and data completion on h2: GRMs derived from fewer SNPs had reduced h2 estimates and the relatedness coefficients significantly deviated from those generated with more SNPs. As a corollary, we discussed limitations to the application of GRMs in the wild, notably how skewed GRMs, specifically many unrelated individuals, can increase variance around h2 estimates. This is the first study to estimate h2 on a free-ranging population of white-tailed deer and should be informative for breeding designs and management as these traits could respond to selection.

Heritability estimates of antler and body traits in white-tailed deer (Odocoileus virginianus) from genomic-relatedness matrices

Estimating heritability (h2) is required to predict the response to selection and is useful in species that are managed or farmed using trait information. Estimating h2 in free-ranging populations is challenging due to the need for pedigrees; genomic-relatedness matrices (GRMs) circumvent this need and can be implemented in nearly any system where phenotypic and SNP data are available. We estimated the heritability of five body and three antler traits in a free-ranging population of white-tailed deer (Odocoileus virginianus) on Anticosti Island, Quebec, Canada. We generated GRMs from >10,000 SNPs: dressed body mass and peroneus muscle mass had moderate h2 values of 0.49 and 0.56, respectively. Heritability in male-only antler features ranged from 0.00 to 0.51 and had high standard errors. We explored the influence of minor allele frequency and data completion filters on h2: GRMs derived from fewer SNPs had reduced h2 estimates and the relatedness coefficients significantly deviated from those generated with more SNPs. As a corollary, we discussed limitations to the application of GRMs in the wild, notably how skewed GRMs increase variance around h2 estimates. This is the first study to estimate h2 on a free-ranging population of white-tailed deer and should be informative for breeding designs and management.

Late Ordovician brachiopods from east-central Alaska, northwestern margin of Laurentia

A Late Ordovician brachiopod fauna from the Black River quadrangle (D-1 1:63,360 scale) of east-central Alaska comprises taxa typical of the Late Ordovician brachiopod fauna in the pericratonic epeiric seas of Laurentia, including Hesperorthis pyramidalis (Twenhofel, 1928), Plaesiomys occidentalis (Okulitch, 1943), Eoplectodonta sp., Holtehdalina sp., Leptaena sp., Brevilamnulella minuta n. sp., Tcherskidium tenuicostatum n. sp., Rhynchotrema iowense Wang, 1949, and Whitfieldella sp. The presence of Plaesiomys occidentalis and Tcherskidium tenuicostata n. sp. indicates a latest Katian age by correlation with similar species in the Mackenzie Mountains, southern Manitoba, Anticosti Island, the American midcontinent, Kolyma, and Siberia. Cluster analysis based on 20 well-studied late Katian brachiopod faunas from various regions within Laurentia and elsewhere in other tectonic plates suggests that the small brachiopod faunule from Alaska has the strongest paleobiogeographic affinity with Laurentia, confirming that the Black River quadrangle of Alaska was part of Laurentia during the Late Ordovician.UUID: http://zoobank.org/6b387856-61d5-4685-a592-faf5287c1e0f