hydrophobic anchor
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2021 ◽  
Author(s):  
Shaohua Zhang ◽  
Wei Li ◽  
Jiabin Luan ◽  
Jiawei Sun ◽  
Danni Wang ◽  
...  

Abstract Covalent and non-covalent molecular binding represent two strategies to tailor surface properties and functions. However, the lack of responsiveness or the requirement of specific binding groups challenged the spatial-temporal control of surface functionalization. Here, we report the adaptive insertion of the hydrophobic anchor into poly(ethylene glycol) (PEG) host as a new non-covalent binding strategy for surface functionalization. By using polycyclic aromatic hydrocarbons as the hydrophobic anchor, hydrophilic charged and non-charged functional modules were spontaneously loaded onto the polymeric membrane in 2 minutes without the assistance of any catalysts and binding groups. The thermodynamically favorable insertion of hydrophobic anchors can be reversed by pulling the functional modules, enabling the programmable surface functionalization. We anticipate that the adaptive molecular recognition between hydrophobic anchor and PEG will challenge the hydrophilic understanding of PEG and enhance the progress in nanomedicine, advanced materials, and nanotechnology.


2020 ◽  
Vol 21 (8) ◽  
pp. 2751
Author(s):  
Benjamin M. M. Grant ◽  
Masahiro Enomoto ◽  
Mitsuhiko Ikura ◽  
Christopher B. Marshall

Calmodulin (CaM) is a Ca2+-sensor that regulates a wide variety of target proteins, many of which interact through short basic helical motifs bearing two hydrophobic ‘anchor’ residues. CaM comprises two globular lobes, each containing a pair of EF-hand Ca2+-binding motifs that form a Ca2+-induced hydrophobic pocket that binds an anchor residue. A central flexible linker allows CaM to accommodate diverse targets. Several reported CaM interactors lack these anchors but contain Lys/Arg-rich polybasic sequences adjacent to a lipidated N- or C-terminus. Ca2+-CaM binds the myristoylated N-terminus of CAP23/NAP22 with intimate interactions between the lipid and a surface comprised of the hydrophobic pockets of both lobes, while the basic residues make electrostatic interactions with the negatively charged surface of CaM. Ca2+-CaM binds farnesylcysteine, derived from the farnesylated polybasic C-terminus of KRAS4b, with the lipid inserted into the C-terminal lobe hydrophobic pocket. CaM sequestration of the KRAS4b farnesyl moiety disrupts KRAS4b membrane association and downstream signaling. Phosphorylation of basic regions of N-/C-terminal lipidated CaM targets can reduce affinity for both CaM and the membrane. Since both N-terminal myristoylated and C-terminal prenylated proteins use a Singly Lipidated Polybasic Terminus (SLIPT) for CaM binding, we propose these polybasic lipopeptide elements comprise a non-canonical CaM-binding motif.


2020 ◽  
Vol 140 (3) ◽  
pp. 435-441
Author(s):  
Kaname Hashizaki ◽  
Risa Umeda ◽  
Motofumi Miura ◽  
Hiroyuki Taguchi ◽  
Makiko Fujii

2019 ◽  
Vol 21 (20) ◽  
pp. 8229-8233 ◽  
Author(s):  
Yumi Hayashi ◽  
Tomoyasu Hirose ◽  
Masato Iwatsuki ◽  
Satoshi O̅mura ◽  
Toshiaki Sunazuka
Keyword(s):  

2019 ◽  
Vol 5 (5) ◽  
pp. eaaw3702 ◽  
Author(s):  
Louis-Marie Bloyet ◽  
Antoine Schramm ◽  
Carine Lazert ◽  
Bertrand Raynal ◽  
Maggy Hologne ◽  
...  

The polymerase of negative-stranded RNA viruses consists of the large protein (L) and the phosphoprotein (P), the latter serving both as a chaperon and a cofactor for L. We mapped within measles virus (MeV) P the regions responsible for binding and stabilizing L and showed that the coiled-coil multimerization domain (MD) of P is required for gene expression. MeV MD is kinked as a result of the presence of a stammer. Both restoration of the heptad regularity and displacement of the stammer strongly decrease or abrogate activity in a minigenome assay. By contrast, P activity is rather tolerant of substitutions within the stammer. Single substitutions at the “a” or “d” hydrophobic anchor positions with residues of variable hydrophobicity revealed that P functionality requires a narrow range of cohesiveness of its MD. Results collectively indicate that, beyond merely ensuring P oligomerization, the MD finely tunes viral gene expression through its cohesiveness.


ChemCatChem ◽  
2018 ◽  
Vol 10 (16) ◽  
pp. 3402-3405 ◽  
Author(s):  
Takahisa Jichu ◽  
Tsubasa Inokuma ◽  
Keisuke Aihara ◽  
Taiki Kohiki ◽  
Kodai Nishida ◽  
...  
Keyword(s):  

eLife ◽  
2017 ◽  
Vol 6 ◽  
Author(s):  
Ho Yee Joyce Fung ◽  
Szu-Chin Fu ◽  
Yuh Min Chook

Nuclear export receptor CRM1 binds highly variable nuclear export signals (NESs) in hundreds of different cargoes. Previously we have shown that CRM1 binds NESs in both polypeptide orientations (Fung et al., 2015). Here, we show crystal structures of CRM1 bound to eight additional NESs which reveal diverse conformations that range from loop-like to all-helix, which occupy different extents of the invariant NES-binding groove. Analysis of all NES structures show 5-6 distinct backbone conformations where the only conserved secondary structural element is one turn of helix that binds the central portion of the CRM1 groove. All NESs also participate in main chain hydrogen bonding with human CRM1 Lys568 side chain, which acts as a specificity filter that prevents binding of non-NES peptides. The large conformational range of NES backbones explains the lack of a fixed pattern for its 3-5 hydrophobic anchor residues, which in turn explains the large array of peptide sequences that can function as NESs.


2016 ◽  
Vol 4 (5) ◽  
pp. 929-937 ◽  
Author(s):  
Yanfang Hu ◽  
Diankui Sun ◽  
Jianxun Ding ◽  
Li Chen ◽  
Xuesi Chen

A novel surface modification strategy to prepare dextran decorated reduced graphene oxide (rGO) sheets for photo-chemotherapy has been presented. In this strategy, octadecanic acid is conjugated on dextran and used as a hydrophobic anchor to prepare dextran decorated rGO sheets.


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