scholarly journals Plate Design for and Cherry Picking of Bacterial RNAi Clones for Systematic Error Detection in High-Throughput Caenorhabditis elegans RNAi Screens

2018 ◽  
Vol 124 (1) ◽  
pp. e70
Author(s):  
Sakthimala Jagadeesan ◽  
Abdul Hakkim
2011 ◽  
Vol 12 (1) ◽  
pp. 25 ◽  
Author(s):  
Plamen Dragiev ◽  
Robert Nadon ◽  
Vladimir Makarenkov

2003 ◽  
Vol 307 (4) ◽  
pp. 928-934 ◽  
Author(s):  
Raymond Y Huang ◽  
Simon J Boulton ◽  
Marc Vidal ◽  
Steve C Almo ◽  
Anne R Bresnick ◽  
...  

PLoS ONE ◽  
2015 ◽  
Vol 10 (11) ◽  
pp. e0142262 ◽  
Author(s):  
Laura Garcia-Segura ◽  
Cei Abreu-Goodger ◽  
Armando Hernandez-Mendoza ◽  
Tzvetanka D. Dimitrova Dinkova ◽  
Luis Padilla-Noriega ◽  
...  

2014 ◽  
Vol 139 ◽  
pp. 33-41 ◽  
Author(s):  
Yiling Lai ◽  
Meichun Xiang ◽  
Shuchun Liu ◽  
Erwei Li ◽  
Yongsheng Che ◽  
...  

2019 ◽  
Vol 3 (Supplement_1) ◽  
pp. S97-S97
Author(s):  
Amin Haghani ◽  
Hans M Dalton ◽  
Nikoo Safi ◽  
Farimah Shirmohammadi ◽  
Constantinos Sioutas ◽  
...  

Abstract Air pollution (AirPoll) is among the leading human mortality risk factors and yet little is known about the molecular mechanisms of this global environmental toxin. Our recent studies using mouse models even showed genetic variation and sex can alter biological responses to air pollution. To expand genetic studies of AirPoll toxicity throughout the lifespan, we introduced Caenorhabditis elegans as a new AirPoll exposure model which has a short lifespan, high throughput capabilities and shared longevity pathways with mammals. Acute exposure of C. elegans to airborne nanosized AirPoll matter (nPM) caused similar gene expression changes to our prior findings in cell culture and mouse models. Initial C. elegans responses to nPM included antioxidant, inflammatory and Alzheimer homolog genes. The magnitude of changes was dependent on the developmental stage of the worms. Even short term exposure of C. elegans to nPM altered developmental and lifespan hormetic effects, with pathways that included skn-1/Nrf family antioxidant responses. We propose C. elegans as a new and complementary model for mouse and cultured cells to study AirPoll across the lifespan. Future chronic nPM exposure and high throughput genetic screening of C. elegans can identify other major regulators of the developmental and lifespan effects of air pollution. This work was supported by grants R01AG051521 (CEF); R21AG05020 (CEF); Cure Alzheimer’s Fund (CEF); R01GM109028 (SPC), F31AG051382 (HMD) and T32AG000037 (HMD), T32AG052374 (AH).


1992 ◽  
Vol 38 (2) ◽  
pp. 204-210 ◽  
Author(s):  
Aristides T Hatjimihail

Abstract I have developed an interactive microcomputer simulation program for the design, comparison, and evaluation of alternative quality-control (QC) procedures. The program estimates the probabilities for rejection under different conditions of random and systematic error when these procedures are used and plots their power function graphs. It also estimates the probabilities for detection of critical errors, the defect rate, and the test yield. To allow a flexible definition of the QC procedures, it includes an interpreter. Various characteristics of the analytical process and the QC procedure can be user-defined. The program extends the concepts of the probability for error detection and of the power function to describe the results of the introduction of error between runs and within a run. The usefulness of this approach is illustrated with some examples.


2010 ◽  
Vol 245 (2) ◽  
pp. 153-159 ◽  
Author(s):  
Windy A. Boyd ◽  
Sandra J. McBride ◽  
Julie R. Rice ◽  
Daniel W. Snyder ◽  
Jonathan H. Freedman

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