scholarly journals Deep transfer learning of structural magnetic resonance imaging fused with blood parameters improves brain age prediction

2021 ◽  
Author(s):  
Bingyu Ren ◽  
Yingtong Wu ◽  
Liumei Huang ◽  
Zhiguo Zhang ◽  
Bingsheng Huang ◽  
...  
2021 ◽  
Vol 15 ◽  
Author(s):  
Jinwoo Hong ◽  
Hyuk Jin Yun ◽  
Gilsoon Park ◽  
Seonggyu Kim ◽  
Yangming Ou ◽  
...  

The accurate prediction of fetal brain age using magnetic resonance imaging (MRI) may contribute to the identification of brain abnormalities and the risk of adverse developmental outcomes. This study aimed to propose a method for predicting fetal brain age using MRIs from 220 healthy fetuses between 15.9 and 38.7 weeks of gestational age (GA). We built a 2D single-channel convolutional neural network (CNN) with multiplanar MRI slices in different orthogonal planes without correction for interslice motion. In each fetus, multiple age predictions from different slices were generated, and the brain age was obtained using the mode that determined the most frequent value among the multiple predictions from the 2D single-channel CNN. We obtained a mean absolute error (MAE) of 0.125 weeks (0.875 days) between the GA and brain age across the fetuses. The use of multiplanar slices achieved significantly lower prediction error and its variance than the use of a single slice and a single MRI stack. Our 2D single-channel CNN with multiplanar slices yielded a significantly lower stack-wise MAE (0.304 weeks) than the 2D multi-channel (MAE = 0.979, p < 0.001) and 3D (MAE = 1.114, p < 0.001) CNNs. The saliency maps from our method indicated that the anatomical information describing the cortex and ventricles was the primary contributor to brain age prediction. With the application of the proposed method to external MRIs from 21 healthy fetuses, we obtained an MAE of 0.508 weeks. Based on the external MRIs, we found that the stack-wise MAE of the 2D single-channel CNN (0.743 weeks) was significantly lower than those of the 2D multi-channel (1.466 weeks, p < 0.001) and 3D (1.241 weeks, p < 0.001) CNNs. These results demonstrate that our method with multiplanar slices accurately predicts fetal brain age without the need for increased dimensionality or complex MRI preprocessing steps.


Author(s):  
Tuan D. Pham

This chapter presents Hidden Markov models (HMM) of the brain on Magnetic Resonance Imaging (MRI) for the inference of white matter hyperintensities and brain age prediction to study the bidirectional vascular depression hypothesis in the elderly and neurodegenerative diseases, respectively. Rating and quantification of cerebral white matter hyperintensities on magnetic resonance imaging are important tasks in various clinical and scientific settings. The authors have proposed that prior knowledge about white matter hyperintensities can be accumulated and utilised to enable a reliable inference of the rating of a new white matter hyperintensity observation. The use of HMM for rating inference of white matter hyperintensities can be used as a computerized rating-assisting tool and can be very economical for diagnostic evaluation of brain tissue lesions. They have also applied HMM for MRI-based brain age prediction. Cortical thinning and intracortical gray matter volume losses are widely observed in normal ageing, while the decreasing rate of the volume loss in subjects with neurodegenerative diseases such as Alzheimer’s disease is reported to be faster than the average speed. Therefore, neurodegenerative disease is considered as accelerated aging. Accurate detection of accelerated ageing of the brain is a relatively new direction of research in computational neuroscience, as it has the potential to offer positive clinical outcome through early intervention.


Sign in / Sign up

Export Citation Format

Share Document