scholarly journals Registration of two rice mapping populations using weedy rice ecotypes as a novel germplasm resource

Author(s):  
Yulin Jia ◽  
Vijay Singh ◽  
David Gealy ◽  
Yan Liu ◽  
Jianbing Ma ◽  
...  
Rice ◽  
2020 ◽  
Vol 13 (1) ◽  
Author(s):  
David M. Goad ◽  
Yulin Jia ◽  
Andrew Gibbons ◽  
Yan Liu ◽  
David Gealy ◽  
...  

2011 ◽  
Vol 37 (8) ◽  
pp. 1324-1332 ◽  
Author(s):  
Jing SHAO ◽  
Wei-Min DAI ◽  
Lian-Ju ZHANG ◽  
Xiao-Ling SONG ◽  
Sheng QIANG

2019 ◽  
Vol 7 (6) ◽  
pp. 809-818 ◽  
Author(s):  
Wenjing Hu ◽  
Xinyao He ◽  
Susanne Dreisigacker ◽  
Carolina P. Sansaloni ◽  
Philomin Juliana ◽  
...  

Rice ◽  
2020 ◽  
Vol 13 (1) ◽  
Author(s):  
Chaopu Zhang ◽  
Zhiyang Yuan ◽  
Yuntong Wang ◽  
Wenqiang Sun ◽  
Xinxin Tang ◽  
...  

Genes ◽  
2021 ◽  
Vol 12 (4) ◽  
pp. 604
Author(s):  
Paolo Vitale ◽  
Fabio Fania ◽  
Salvatore Esposito ◽  
Ivano Pecorella ◽  
Nicola Pecchioni ◽  
...  

Traits such as plant height (PH), juvenile growth habit (GH), heading date (HD), and tiller number are important for both increasing yield potential and improving crop adaptation to climate change. In the present study, these traits were investigated by using the same bi-parental population at early (F2 and F2-derived F3 families) and late (F6 and F7, recombinant inbred lines, RILs) generations to detect quantitative trait loci (QTLs) and search for candidate genes. A total of 176 and 178 lines were genotyped by the wheat Illumina 25K Infinium SNP array. The two genetic maps spanned 2486.97 cM and 3732.84 cM in length, for the F2 and RILs, respectively. QTLs explaining the highest phenotypic variation were found on chromosomes 2B, 2D, 5A, and 7D for HD and GH, whereas those for PH were found on chromosomes 4B and 4D. Several QTL detected in the early generations (i.e., PH and tiller number) were not detected in the late generations as they were due to dominance effects. Some of the identified QTLs co-mapped to well-known adaptive genes (i.e., Ppd-1, Vrn-1, and Rht-1). Other putative candidate genes were identified for each trait, of which PINE1 and PIF4 may be considered new for GH and TTN in wheat. The use of a large F2 mapping population combined with NGS-based genotyping techniques could improve map resolution and allow closer QTL tagging.


Agronomy ◽  
2021 ◽  
Vol 11 (4) ◽  
pp. 643
Author(s):  
Mst. Motmainna ◽  
Abdul Shukor Juraimi ◽  
Md. Kamal Uddin ◽  
Norhayu Binti Asib ◽  
A. K. M. Mominul Islam ◽  
...  

Natural product-based herbicides could be the effective alternatives to synthetic chemical herbicides for eco-friendly weed management. This research, therefore, was conducted to identify the phytotoxic properties of Parthenium hysterophorus L., Cleome rutidosperma DC. and Borreria alata (Aubl.) DC. with a view to introducing them as a tool for natural herbicide development. The methanol extracts of these plants were examined on the germination and growth of Zea mays L., Oryza sativa L., Abelmoschus esculentus (L.) Moench and Amaranthus gangeticus L., Oryza sativa f. Spontanea Roshev. (Weedy rice), Echinochloa colona (L.) Link., Euphorbia hirta L., and Ageratum conyzoides L. under laboratory and glasshouse conditions. A complete randomized design (CRD) with five replications and randomized complete block design (RCBD) with four replications were laid out for laboratory and glasshouse experiments, respectively. In the laboratory experiment, three plant extracts of 0, 6.25, 12.5, 50, and 100 g L−1 were tested on survival rate, hypocotyl, and radicle length of eight test plant species. No seed germination of A. conzyoides, E. hirta, and A. gangeticus were recorded when P. hysterophorus extract was applied at 50 g L−1. C. rutidosperma had the same effect on those plants at 100 g L−1. In the glasshouse, similar extracts and concentrations used in the laboratory experiments were sprayed on at the 2–3 leaf stage for grasses and 4–6 for the broadleaf species. Tested plants were less sensitive to C. rutidosperma and B. alata compared to P. hysterophorus extract. Among the weeds and crops, A. conyzoides, E. hirta, A. esculentus and A. gangeticus were mostly inhibited by P. hysterophorus extract at 100 g L−1. Based on these results, P. hysterophorus was the most phytotoxic among the tested plant extracts and could be used for developing a new natural herbicide for green agriculture.


Genetics ◽  
2000 ◽  
Vol 155 (3) ◽  
pp. 1369-1378 ◽  
Author(s):  
Grant A Walling ◽  
Peter M Visscher ◽  
Leif Andersson ◽  
Max F Rothschild ◽  
Lizhen Wang ◽  
...  

Abstract For many species several similar QTL mapping populations have been produced and analyzed independently. Joint analysis of such data could be used to increase power to detect QTL and evaluate population differences. In this study, data were collated on almost 3000 pigs from seven different F2 crosses between Western commercial breeds and either the European wild boar or the Chinese Meishan breed. Genotypes were available for 31 markers on chromosome 4 (on average 8.3 markers per population). Data from three traits common to all populations (birth weight, mean backfat depth at slaughter or end of test, and growth rate from birth to slaughter or end of test) were analyzed for individual populations and jointly. A QTL influencing birth weight was detected in one individual population and in the combined data, with no significant interaction of the QTL effect with population. A QTL affecting backfat that had a significantly greater effect in wild boar than in Meishan crosses was detected. Some evidence for a QTL affecting growth rate was detected in all populations, with no significant differences between populations. This study is the largest F2 QTL analysis achieved in a livestock species and demonstrates the potential of joint analysis.


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