Activation Tagging Using the Maize En-I Transposon System for the Identification of Abiotic Stress Resistance Genes in Arabidopsis

Author(s):  
Amal Harb ◽  
Andy Pereira
2014 ◽  
Vol 79 (4) ◽  
pp. 362-375 ◽  
Author(s):  
T. V. Savchenko ◽  
O. M. Zastrijnaja ◽  
V. V. Klimov

Author(s):  
Roderic Gilles C. Diabankana ◽  
Daniel M. Afordoanyi ◽  
Radik I. Safin ◽  
Rustam M. Nizamov ◽  
Lilia Z. Karimova ◽  
...  

Author(s):  
Ali Raza ◽  
Sundas Saher Mehmood ◽  
Javaria Tabassum ◽  
Raufa Batool

Author(s):  
Cassandria Tay Fernandez ◽  
Jacob Marsh ◽  
Mônica Furaste Danilevicz ◽  
Clémentine Mercé ◽  
David Edwards

Abstract This chapter discusses the application of pangenomics for molecular breeding of wheat. Pangenomes can be used by both researchers and breeders alike to develop elite wheat cultivars through the discovery and integration of genetic variations associated with agronomically beneficial traits. By providing a reference that accommodates for variation in individuals, variants whose presence and/or absence control abiotic stress resistance and yield can be identified. This tool has only become more informative as more wheat varieties are sequenced, new sequencing approaches such as long-read sequencing and genome mapping are utilized, and tools for pangenomic analysis are developed. With pangenomics, variable genes from wild wheat relatives and related species can be used to optimize wheat molecular breeding and develop improved varieties tailored for the changing global environment.


Genes ◽  
2019 ◽  
Vol 11 (1) ◽  
pp. 25 ◽  
Author(s):  
Xue Yang ◽  
Jinchi Wei ◽  
Zhihai Wu ◽  
Jie Gao

Glutathione S-transferases (GSTs)—an especially plant-specific tau class of GSTs—are key enzymes involved in biotic and abiotic stress responses. To improve the stress resistance of crops via the genetic modification of GSTs, we predicted the amino acids present in the GSH binding site (G-site) and hydrophobic substrate-binding site (H-site) of OsGSTU17, a tau class GST in rice. We then examined the enzyme activity, substrate specificity, enzyme kinetics and thermodynamic stability of the mutant enzymes. Our results showed that the hydrogen bonds between Lys42, Val56, Glu68, and Ser69 of the G-site and glutathione were essential for enzyme activity and thermal stability. The hydrophobic side chains of amino acids of the H-site contributed to enzyme activity toward 4-nitrobenzyl chloride but had an inhibitory effect on enzyme activity toward 1-chloro-2,4-dinitrobenzene and cumene hydroperoxide. Different amino acids of the H-site had different effects on enzyme activity toward a different substrate, 7-chloro-4-nitrobenzo-2-oxa-1,3-diazole. Moreover, Leu112 and Phe162 were found to inhibit the catalytic efficiency of OsGSTU17 to 7-chloro-4-nitrobenzo-2-oxa-1,3-diazole, while Pro16, Leu112, and Trp165 contributed to structural stability. The results of this research enhance the understanding of the relationship between the structure and function of tau class GSTs to improve the abiotic stress resistance of crops.


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