Miyazawa-Jernigan Contact Potentials and Carter-Wolfenden Vapor-to-Cyclohexane and Water-to-Cyclohexane Scales as Parameters for Calculating Amino Acid Pair Distances

2016 ◽  
pp. 358-365 ◽  
Author(s):  
Nikola Štambuk ◽  
Paško Konjevoda ◽  
Zoran Manojlović
Keyword(s):  
Amino Acid ◽  
Amino Acid Pair

Prediction of linear B-cell epitopes using amino acid pair antigenicity scale

Amino Acids ◽  
2007 ◽  
Vol 33 (3) ◽  
pp. 423-428 ◽  
Author(s):  
J. Chen ◽  
H. Liu ◽  
J. Yang ◽  
K.-C. Chou
Keyword(s):  
Amino Acid ◽  
B Cell ◽  
Amino Acid Pair ◽  
B Cell Epitopes ◽  
Linear B

scholarly journals PET and FRET utility of an amino acid pair: tryptophan and 4-cyanotryptophan

2019 ◽  
Vol 21 (24) ◽  
pp. 12843-12849 ◽  
Author(s):  
Ismail A. Ahmed ◽  
Jeffrey M. Rodgers ◽  
Christina Eng ◽  
Thomas Troxler ◽  
Feng Gai
Keyword(s):  
Amino Acids ◽  
Amino Acid ◽  
Biological Applications ◽  
Amino Acid Pair

The amino acids tryptophan and 4-cyanotryptophan constitute a dual FRET and PET pair, useful for various biological applications.

Amino Acid Pair Interchanges at Spatially Conserved Locations

1996 ◽  
Vol 256 (5) ◽  
pp. 924-938 ◽  
Author(s):  
Dalit Naor ◽  
Daniel Fischer ◽  
Robert L. Jernigan ◽  
Haim J. Wolfson ◽  
Ruth Nussinov
Keyword(s):  
Amino Acid ◽  
Amino Acid Pair

scholarly journals Structural and Kinetic Insights Reveal That the Amino Acid Pair Gln-228/Asn-254 Modulates the Transfructosylating Specificity ofSchwanniomyces occidentalisβ-Fructofuranosidase, an Enzyme That Produces Prebiotics

2012 ◽  
Vol 287 (23) ◽  
pp. 19674-19686 ◽  
Author(s):  
Miguel Álvaro-Benito ◽  
M. Angela Sainz-Polo ◽  
David González-Pérez ◽  
Beatriz González ◽  
Francisco J. Plou ◽  
...  
Keyword(s):  
Amino Acid ◽  
Amino Acid Pair

The external gate of the human and Drosophila serotonin transporters requires a basic/acidic amino acid pair for 3,4-methylenedioxymethamphetamine (MDMA) translocation and the induction of substrate efflux

2016 ◽  
Vol 120 ◽  
pp. 46-55 ◽  
Author(s):  
Natalie R. Sealover ◽  
Bruce Felts ◽  
Charles P. Kuntz ◽  
Rachel E. Jarrard ◽  
Gregory H. Hockerman ◽  
...  
Keyword(s):  
Amino Acid ◽  
Acidic Amino Acid ◽  
Amino Acid Pair ◽  
Serotonin Transporters

scholarly journals Scale-Free Behaviour of Amino Acid Pair Interactions in Folded Proteins

PLoS ONE ◽  
2012 ◽  
Vol 7 (7) ◽  
pp. e41322 ◽  
Author(s):  
Steffen B. Petersen ◽  
Maria Teresa Neves-Petersen ◽  
Svend B. Henriksen ◽  
Rasmus J. Mortensen ◽  
Henrik M. Geertz-Hansen
Keyword(s):  
Amino Acid ◽  
Amino Acid Pair ◽  
Scale Free ◽  
Folded Proteins ◽  
Pair Interactions
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