Biotechnologies from Marine Bivalves

The razor clam, Sinonovacula constricta is a commercially important bivalve in the western Pacific Ocean, yet little is known about the mechanisms of sex determination/differentiation and gametogenesis. In the present study, the comparative transcriptome analysis of adult gonads (female gonads and male gonads) was conducted to identify potential sex-related genes in S. constricta. The number of reads generated for each target library (three females and three males) ranged from 31,853,422 to 37,750,848, and 20,489,472 to 26,152,448 could be mapped to the reference genome of S. constricta (the map percentage ranging from 63.71 to 71.48%). A total of 8,497 genes were identified to be differentially expressed between the female and male gonads, of which 4,253 were female-biased (upregulated in females), and 4,244 were male-biased. Forty-five genes were identified as potential sex-related genes, including DmrtA2, Sox9, Fem-1b, and Fem-1c involved in sex determination/differentiation and Vg, CYP17A1, SOHLH2, and TSSK involved in gametogenesis. The expression profiles of 12 genes were validated by qRT-PCR, which further confirmed the reliability and accuracy of the RNA-Seq results. Our results provide basic information about the genes involved in sex determination/differentiation and gametogenesis, and pave the way for further studies on reproduction and breeding in S. constricta and other marine bivalves.

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Allozyme and RFLP heterozygosities as correlates of growth rate in the scallop Placopecten magellanicus: a test of the associative overdominance hypothesis.

Genetics ◽

10.1093/genetics/137.1.221 ◽

1994 ◽

Vol 137 (1) ◽

pp. 221-231 ◽

Cited By ~ 3

Author(s):

G H Pogson ◽

E Zouros

Keyword(s):

Growth Rate ◽

Placopecten Magellanicus ◽

Functional Differences ◽

Enzyme Loci ◽

Length Polymorphisms ◽

Marine Bivalves ◽

Causative Agents ◽

Recessive Genes ◽

Positive Correlations ◽

Allozyme Loci

Abstract Several studies have reported positive correlations between the degree of enzyme heterozygosity and fitness-related traits. Notable among these are the correlations between heterozygosity and growth rate in marine bivalves. Whether the correlation is the result of intrinsic functional differences between enzyme variants at the electrophoretic loci scored or arises from non-random genotypic associations between these loci and others segregating for deleterious recessive genes (the associative overdominance hypothesis) is a matter of continuing debate. A prediction of the associative overdominance hypothesis, not shared by explanations that treat the enzyme loci as causative agents of the correlation, is that the correlation is not specific to the type of genetic marker used. We have tested this prediction by scoring heterozygosity at single locus nuclear restriction fragment length polymorphisms (RFLPs) in a cohort of juvenile scallops (Placopecten magellanicus) in which growth rate was known to be positively correlated with an individual's degree of allozyme heterozygosity. A total of 222 individuals were scored for their genotypes at seven allozyme loci, two nonspecific protein loci of unknown function and eight nuclear RFLPs detected by anonymous cDNA probes. In contrast to the enzyme loci, no correlation was observed between growth rate and the degree of heterozygosity at the DNA markers. Furthermore, there was no relationship between the magnitude of heterozygote deficiency at a locus and its effect on the correlation. The differences observed between the effects of allozyme and RFLP heterozygosity on growth rate provide evidence against the associative overdominance hypothesis, but a strong case against this explanation must await corroboration from similar studies in different species.

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PERMIAN NON-MARINE BIVALVES FROM THE COLLIO AND GUNCINA FORMATIONS (SOUTHERN ALPS, ITALY): REVISED BIOSTRATIGRAPHY AND PALAEOBIOGEOGRAPHY

RIVISTA ITALIANA DI PALEONTOLOGIA E STRATIGRAFIA ◽

10.54103/2039-4942/17050 ◽

2022 ◽

Vol 128 (1) ◽

Author(s):

VLADIMIR SILANTIEV ◽

LORENZO MARCHETTI ◽

AUSONIO RONCHI ◽

PAOLO SCHIROLLI ◽

FRANK SCHOLZE ◽

...

Keyword(s):

Eastern Europe ◽

Global Scale ◽

Southern Alps ◽

Lower Permian ◽

Migration Routes ◽

Center Of Origin ◽

Marine Bivalves ◽

Radioisotopic Dating ◽

First Time ◽

Marine Basins

Non-marine bivalves are key fossils in Permian continental stratigraphy and palaeogeography. Although known since the end of 19th century, the occurrences from the continental basins of the Southern Alps have never been extensively studied. The non-marine bivalves from the Lower Permian Collio Formation (Brescian pre-Alps) are herein revised, and those from the Guncina Formation (Athesian District) are described for the first time. These two units yielded non-marine bivalves belonging to the genus Palaeomutela sensu lato, which is widespread in the Permian continental successions of eastern Euramerica. Three Palaeomutela morphotypes have been herein described: oval-subtriangular, subtrapezoidal and elongated. The latter includes several specimens herein assigned to Palaeomutela (Palaeanodonta) berrutii sp. nov. and dominates the Collio Formation association. The Guncina Formation yielded also the genus Redikorella, for the first time co-occurring on the same stratigraphic horizon of Palaeomutela, herein assigned to Palaeomutela (Palaeanodonta) guncinaensis sp. nov. To-date, it was generally accepted that the first members of the genera Palaeomutela and Redikorella occurred during the Ufimian (late Kungurian of the global scale) in the non-marine basins of the Cis-Ural Foredeep and of Angara, respectively. Such new finds in the early-middle Kungurian of southwestern Europe, well constrained by radioisotopic dating, suggest new global first appearance (First Appearance Datum) and a possible new center of origin of these genera. This fact raises new questions on biostratigraphy, palaeobiogeography and palaeoecology, which will require further research. If we assume that the genera Palaeomutela and Redikorella had only one center of origin, we need to hypothesise possible migration routes from SW Europe to the continental basins of Eastern Europe and Angara. Apparently, such migration could be better supported by a Pangaea B palaeogeographic configuration.

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