3-Phosphoglycerate dehydrogenase from Corynebacterium glutamicum : the C-terminal domain is not essential for activity but is required for inhibition by L -serine

2002 ◽  
Vol 60 (4) ◽  
pp. 437-441 ◽  
Author(s):  
Peters-Wendisch P. ◽  
Netzer R. ◽  
Eggeling L. ◽  
Sahm H.
2016 ◽  
Vol 1858 (1) ◽  
pp. 130-138 ◽  
Author(s):  
Yoshitaka Nakayama ◽  
Michael Becker ◽  
Haleh Ebrahimian ◽  
Tomoyuki Konishi ◽  
Hisashi Kawasaki ◽  
...  

2009 ◽  
Vol 390 (8) ◽  
Author(s):  
Reinhard Krämer ◽  
Christine Ziegler

Abstract Activation of the osmoregulated trimeric betaine transporter BetP from Corynebacterium glutamicum was shown to depend mainly on the correct folding and integrity of its 55 amino acid long, partly α-helical C-terminal domain. Reorientation of the three C-terminal domains in the BetP trimer indicates different lipid-protein and protein-protein interactions of the C-terminal domain during osmoregulation. A regulation mechanism is suggested where this domain switches the transporter from the inactive to the active state. Interpretation of recently obtained electron and X-ray crystallography data of BetP led to a structure-function based model of C-terminal molecular switching involved in osmoregulation.


2005 ◽  
Vol 71 (11) ◽  
pp. 7139-7144 ◽  
Author(s):  
Petra Peters-Wendisch ◽  
Michael Stolz ◽  
Helga Etterich ◽  
Nicole Kennerknecht ◽  
Hermann Sahm ◽  
...  

ABSTRACT Although l-serine proceeds in just three steps from the glycolytic intermediate 3-phosphoglycerate, and as much as 8% of the carbon assimilated from glucose is directed via l-serine formation, previous attempts to obtain a strain producing l-serine from glucose have not been successful. We functionally identified the genes serC and serB from Corynebacterium glutamicum, coding for phosphoserine aminotransferase and phosphoserine phosphatase, respectively. The overexpression of these genes, together with the third biosynthetic serA gene, serA Δ 197, encoding an l-serine-insensitive 3-phosphoglycerate dehydrogenase, yielded only traces of l-serine, as did the overexpression of these genes in a strain with the l-serine dehydratase gene sdaA deleted. However, reduced expression of the serine hydroxymethyltransferase gene glyA, in combination with the overexpression of serA Δ 197, serC, and serB, resulted in a transient accumulation of up to 16 mM l-serine in the culture medium. When sdaA was also deleted, the resulting strain, C. glutamicum ΔsdaA::pK18mobglyA′(pEC-T18mob2serA Δ197 CB), accumulated up to 86 mM l-serine with a maximal specific productivity of 1.2 mmol h−1 g (dry weight)−1. This illustrates a high rate of l-serine formation and also utilization in the C. glutamicum wild type. Therefore, metabolic engineering of l-serine production from glucose can be achieved only by addressing the apparent key position of this amino acid in the central metabolism.


1997 ◽  
Vol 323 (2) ◽  
pp. 365-370 ◽  
Author(s):  
Younes ACHOURI ◽  
Mark H. RIDER ◽  
Emile VAN SCHAFTINGEN ◽  
Mariette ROBBI

Rat liver d-3-phosphoglycerate dehydrogenase was purified to homogeneity and digested with trypsin, and the sequences of two peptides were determined. This sequence information was used to screen a rat hepatoma cDNA library. Among 11 positive clones, two covered the whole coding sequence. The deduced amino acid sequence (533 residues; Mr 56493) shared closer similarity with Bacillus subtilis 3-phosphoglycerate dehydrogenase than with the enzymes from Escherichia coli, Haemophilus influenzae and Saccharomyces cerevisiae. In all cases the similarity was most apparent in the substrate- and NAD+-binding domains, and low or insignificant in the C-terminal domain. A corresponding 2.1 kb mRNA was present in rat tissues including kidney, brain and testis, whatever the dietary status, and also in livers of animals fed a protein-free, carbohydrate-rich diet, but not in livers of control rats, suggesting transcriptional regulation. The full-length rat 3-phosphoglycerate dehydrogenase was expressed in E. coli and purified. The recombinant enzyme and the protein purified from liver displayed hyperbolic kinetics with respect to 3-phosphoglycerate, NAD+ and NADH, but substrate inhibition by 3-phosphohydroxypyruvate was observed; this inhibition was antagonized by salts. Similar properties were observed with a truncated form of 3-phosphoglycerate dehydrogenase lacking the C-terminal domain, indicating that the latter is not implicated in substrate inhibition or in salt effects. By contrast with the bacterial enzyme, rat 3-phosphoglycerate dehydrogenase did not catalyse the reduction of 2-oxoglutarate, indicating that this enzyme is not involved in human d- or l-hydroxyglutaric aciduria.


2016 ◽  
Vol 110 (3) ◽  
pp. 92a-93a
Author(s):  
Yoshitaka Nakayama ◽  
Michael Becker ◽  
Haleh Ebrahimian ◽  
Tomoyuki Konishi ◽  
Hisashi Kawasaki ◽  
...  

2020 ◽  
Vol 114 (1) ◽  
pp. 1-16 ◽  
Author(s):  
Christiane Dietrich ◽  
Ines Li de la Sierra‐Gallay ◽  
Muriel Masi ◽  
Eric Girard ◽  
Nathalie Dautin ◽  
...  

2021 ◽  
Vol 9 (2) ◽  
pp. 409
Author(s):  
Yutaro Kumagai ◽  
Takashi Hirasawa ◽  
Masaaki Wachi

The ltsA gene of Corynebacterium glutamicum encodes a purF-type glutamine-dependent amidotransferase, and mutations in this gene result in increased susceptibility to lysozyme. Recently, it was shown that the LtsA protein catalyzes the amidation of diaminopimelate residues in the lipid intermediates of peptidoglycan biosynthesis. In this study, intracellular localization of wild-type and mutant LtsA proteins fused with green fluorescent protein (GFP) was investigated. The GFP-fused wild-type LtsA protein showed a peripheral localization pattern characteristic of membrane-associated proteins. The GFP-fusions with a mutation in the N-terminal domain of LtsA, which is necessary for the glutamine amido transfer reaction, exhibited a similar localization to the wild type, whereas those with a mutation or a truncation in the C-terminal domain, which is not conserved among the purF-type glutamine-dependent amidotransferases, did not. These results suggest that the C-terminal domain is required for peripheral localization. Differential staining of cell wall structures with fluorescent dyes revealed that formation of the mycolic acid-containing layer at the cell division planes was affected in the ltsA mutant cells. This was also confirmed by observation that bulge formation was induced at the cell division planes in the ltsA mutant cells upon lysozyme treatment. These results suggest that the LtsA protein function is required for the formation of a mycolic acid-containing layer at the cell division planes and that this impairment results in increased susceptibility to lysozyme.


2014 ◽  
Vol 65 (2) ◽  
pp. 929-935 ◽  
Author(s):  
Guoqiang Xu ◽  
Xuexia Jin ◽  
Wen Guo ◽  
Wenfang Dou ◽  
Xiaomei Zhang ◽  
...  

2020 ◽  
Author(s):  
Ekaterina A. Shmonova ◽  
Olga V. Voloshina ◽  
Maksim V. Ovsienko ◽  
Sergey V. Smirnov ◽  
Vera G. Doroshenko

AbstractThe dehydroshikimate dehydratase (DSD) from Corynebacterium glutamicum encoded by the qsuB gene is related to the previously described QuiC1 protein (39.9% identity) from Pseudomonas putida. QuiC1 and QsuB are both two-domain bacterial DSDs. The N-terminal domain provides dehydratase activity, while the C-terminal domain has sequence identity with 4-hydroxyphenylpyruvate dioxygenase. Here, the QsuB protein and its DSD domain (N-QsuB) were expressed in the T7 system, purified and characterized. QsuB was present mainly in octameric form (60%), while N-QsuB had a predominantly monomeric structure (80%) in solution. Both proteins possessed DSD activity with one of the following cofactors (listed in order of decreasing activity): Co2+, Mg2+, Mn2+ or Ca2+. The Km and kcat values for QsuB were two and three times higher, respectively (Km ~ 1 mM, kcat ~ 61 s−1) than those for N-QsuB. Notably, 3,4-DHBA inhibited both enzymes via an uncompetitive mechanism. QsuB and N-QsuB were tested for 3,4-DHBA production from glucose in E. coli. MG1655ΔaroE Plac–qsuB produced at least two times more 3,4-DHBA than MG1655ΔaroE Plac–n-qsuB in the presence of isopropyl β-D-1-thiogalactopyranoside.


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