Control of RNA polymerase II-transcribed genes by direct binding of TOR kinase

2017 ◽  
Vol 64 (1) ◽  
pp. 131-135 ◽  
Author(s):  
Anne Grove
PLoS Genetics ◽  
2013 ◽  
Vol 9 (11) ◽  
pp. e1003914 ◽  
Author(s):  
Dominik M. Meinel ◽  
Cornelia Burkert-Kautzsch ◽  
Anja Kieser ◽  
Eoghan O'Duibhir ◽  
Matthias Siebert ◽  
...  

2017 ◽  
Vol 28 (18) ◽  
pp. 2449-2459 ◽  
Author(s):  
Arvind Panday ◽  
Ashish Gupta ◽  
Kavitha Srinivasa ◽  
Lijuan Xiao ◽  
Mathew D. Smith ◽  
...  

The mechanistic target of rapamycin complex 1 (mTORC1) senses nutrient sufficiency and cellular stress. When mTORC1 is inhibited, protein synthesis is reduced in an intricate process that includes a concerted down-regulation of genes encoding rRNA and ribosomal proteins. The Saccharomyces cerevisiae high-mobility group protein Hmo1p has been implicated in coordinating this response to mTORC1 inhibition. We show here that Tor1p binds directly to the HMO1 gene (but not to genes that are not linked to ribosome biogenesis) and that the presence of Tor1p is associated with activation of gene activity. Persistent induction of DNA double-strand breaks or mTORC1 inhibition by rapamycin results in reduced levels of HMO1 mRNA, but only in the presence of Tor1p. This down-regulation is accompanied by eviction of Ifh1p and recruitment of Crf1p, followed by concerted dissociation of Hmo1p and Tor1p. These findings uncover a novel role for TOR kinase in control of gene activity by direct association with an RNA polymerase II–transcribed gene.


2006 ◽  
Vol 73 ◽  
pp. 85-96 ◽  
Author(s):  
Richard J. Reece ◽  
Laila Beynon ◽  
Stacey Holden ◽  
Amanda D. Hughes ◽  
Karine Rébora ◽  
...  

The recognition of changes in environmental conditions, and the ability to adapt to these changes, is essential for the viability of cells. There are numerous well characterized systems by which the presence or absence of an individual metabolite may be recognized by a cell. However, the recognition of a metabolite is just one step in a process that often results in changes in the expression of whole sets of genes required to respond to that metabolite. In higher eukaryotes, the signalling pathway between metabolite recognition and transcriptional control can be complex. Recent evidence from the relatively simple eukaryote yeast suggests that complex signalling pathways may be circumvented through the direct interaction between individual metabolites and regulators of RNA polymerase II-mediated transcription. Biochemical and structural analyses are beginning to unravel these elegant genetic control elements.


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