Complete genome characterization of three enterovirus C96 isolates in China

2019 ◽  
Vol 164 (8) ◽  
pp. 2183-2186
Author(s):  
Qian Wang ◽  
Feng Ji ◽  
Suting Wang ◽  
Xiaojuan Lin ◽  
Zexin Tao ◽  
...  
Keyword(s):  
Complete Genome ◽  
Genome Characterization

scholarly journals Identification and complete genome characterization of a novel picornavirus in turkey (Meleagris gallopavo)

2012 ◽  
Vol 93 (10) ◽  
pp. 2171-2182 ◽  
Author(s):  
Ákos Boros ◽  
Csaba Nemes ◽  
Péter Pankovics ◽  
Beatrix Kapusinszky ◽  
Eric Delwart ◽  
...  
Keyword(s):  
Amino Acid ◽  
Complete Genome ◽  
Bird Species ◽  
Entry Site ◽  
Pathogenic Potential ◽  
Genome Characterization ◽  
Genome Region ◽  
Faecal Samples ◽  
The Usa

Members of the family Picornaviridae are important pathogens of humans and animals, although compared with the thousands of known bird species (>10 000), only a few (n = 11) picornaviruses have been identified from avian sources. This study reports the metagenomic detection and complete genome characterization of a novel turkey picornavirus from faecal samples collected from eight turkey farms in Hungary. Using RT-PCR, both healthy (two of three) and affected (seven of eight) commercial turkeys with enteric and/or stunting syndrome were shown to be shedding viruses in seven (88 %) of the eight farms. The viral genome sequence (turkey/M176/2011/HUN; GenBank accession no. JQ691613) shows a high degree of amino acid sequence identity (96 %) to the partial P3 genome region of a picornavirus reported recently in turkey and chickens from the USA and probably belongs to the same species. In the P1 and P2 regions, turkey/M176/2011/HUN is related most closely to, but distinct from, the kobuviruses and turdivirus 1. Complete genome analysis revealed the presence of characteristic picornaviral amino acid motifs, a potential type II-like 5′ UTR internal ribosome entry site (first identified among avian-origin picornaviruses) and a conserved, 48 nt long ‘barbell-like’ structure found at the 3′ UTR of turkey/M176/2011/HUN and members of the picornavirus genera Avihepatovirus and Kobuvirus. The general presence of turkey picornavirus – a novel picornavirus species – in faecal samples from healthy and affected turkeys in Hungary and in the USA suggests the worldwide occurrence and endemic circulation of this virus in turkey farms. Further studies are needed to investigate the aetiological role and pathogenic potential of this picornavirus in food animals.

scholarly journals Complete Genome Characterization of Chinese Porcine Deltacoronavirus Strain CHN/Tianjin/2016

2017 ◽  
Vol 5 (16) ◽  
Author(s):  
Feng Zhao ◽  
Ying Sun ◽  
Bingxu Qian ◽  
Xiaorong Zhang ◽  
Yantao Wu
Keyword(s):  
Hong Kong ◽  
Genome Sequence ◽  
Complete Genome Sequence ◽  
Complete Genome ◽  
Fecal Samples ◽  
Genome Characterization

ABSTRACT As we all know, porcine deltacoronavirus was first detected in Hong Kong, China. Here, we report the complete genome sequence of the Chinese porcine deltacoronavirus strain CHN/Tianjin/2016, which was collected and amplified from clinical fecal samples in March of 2016.

Experimental pathogenicity and complete genome characterization of a pig origin Pasteurella multocida serogroup F isolate HN07

2017 ◽  
Vol 198 ◽  
pp. 23-33 ◽  
Author(s):  
Zhong Peng ◽  
Wan Liang ◽  
Yuanguo Wang ◽  
Wenjing Liu ◽  
Hongfeng Zhang ◽  
...  
Keyword(s):  
Complete Genome ◽  
Pasteurella Multocida ◽  
Genome Characterization ◽  
Experimental Pathogenicity

scholarly journals Complete Genome Characterization of a Novel Enterovirus Type EV-B106 Isolated in China, 2012

2014 ◽  
Vol 4 (1) ◽  
Author(s):  
Jingjing Tang ◽  
Zexin Tao ◽  
Zhengrong Ding ◽  
Yong Zhang ◽  
Jie Zhang ◽  
...  
Keyword(s):  
Complete Genome ◽  
Genome Characterization ◽  
Enterovirus Type

scholarly journals Detection and complete genome characterization of human enterovirus 118 from children with acute respiratory disease in China

Virus Genes ◽  
2014 ◽  
Vol 48 (3) ◽  
pp. 534-537 ◽  
Author(s):  
Qing-Bin Lu ◽  
Ying Wo ◽  
Hong-Yu Wang ◽  
Xiao-Ai Zhang ◽  
Dou-Dou Huang ◽  
...  
Keyword(s):  
Respiratory Disease ◽  
Complete Genome ◽  
Human Enterovirus ◽  
Acute Respiratory Disease ◽  
Genome Characterization

Complete genome characterization of porcine epidemic diarrhea virus in Vietnam

2015 ◽  
Vol 160 (8) ◽  
pp. 1931-1938 ◽  
Author(s):  
Dam Thi Vui ◽  
To Long Thanh ◽  
Nguyen Tung ◽  
Anchalee Srijangwad ◽  
Thitima Tripipat ◽  
...  
Keyword(s):  
Porcine Epidemic Diarrhea Virus ◽  
Complete Genome ◽  
Genome Characterization ◽  
Diarrhea Virus ◽  
Porcine Epidemic Diarrhea

Complete genome characterization of a East European Type 1 subtype 3 porcine reproductive and respiratory syndrome virus

Virus Genes ◽  
2011 ◽  
Vol 44 (1) ◽  
pp. 51-54 ◽  
Author(s):  
J. Van Doorsselaere ◽  
M. S. Brar ◽  
M. Shi ◽  
U. Karniychuk ◽  
F. C.-C. Leung ◽  
...  
Keyword(s):  
Complete Genome ◽  
Respiratory Syndrome Virus ◽  
Genome Characterization ◽  
East European ◽  
Subtype 3

scholarly journals Molecular Epidemiology and Complete Genome Characterization of H1N1pdm Virus from India

PLoS ONE ◽  
2013 ◽  
Vol 8 (2) ◽  
pp. e56364 ◽  
Author(s):  
Shashi Sharma ◽  
Gaurav Joshi ◽  
Paban K. Dash ◽  
Maria Thomas ◽  
Thimmasandra N. Athmaram ◽  
...  
Keyword(s):  
Molecular Epidemiology ◽  
Complete Genome ◽  
Genome Characterization
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