NAC transcription factor genes: genome-wide identification, phylogenetic, motif and cis-regulatory element analysis in pigeonpea (Cajanus cajan (L.) Millsp.)

2014 ◽  
Vol 41 (12) ◽  
pp. 7763-7773 ◽  
Author(s):  
Viswanathan Satheesh ◽  
P. Tej Kumar Jagannadham ◽  
Parameswaran Chidambaranathan ◽  
P. K. Jain ◽  
R. Srinivasan
Keyword(s):  
Transcription Factor ◽  
Cajanus Cajan ◽  
Regulatory Element ◽  
Nac Transcription Factor ◽  
Element Analysis ◽  
Genome Wide ◽  
Transcription Factor Genes

scholarly journals Genome-wide identification and expression profiling of MYB transcription factor genes in radish (Raphanus sativus L.)

2021 ◽  
Vol 20 (1) ◽  
pp. 120-131
Author(s):  
Everlyne M’mbone MULEKE ◽  
Yan WANG ◽  
Wan-ting ZHANG ◽  
Liang XU ◽  
Jia-li YING ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Expression Profiling ◽  
Raphanus Sativus ◽  
Myb Transcription Factor ◽  
Genome Wide ◽  
Raphanus Sativus L ◽  
Transcription Factor Genes

scholarly journals Genome-Wide Identification and Expression Analysis of the NAC Transcription Factor Family in Cassava

PLoS ONE ◽  
2015 ◽  
Vol 10 (8) ◽  
pp. e0136993 ◽  
Author(s):  
Wei Hu ◽  
Yunxie Wei ◽  
Zhiqiang Xia ◽  
Yan Yan ◽  
Xiaowan Hou ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Expression Analysis ◽  
Nac Transcription Factor ◽  
Transcription Factor Family ◽  
Genome Wide

Genome-Wide Identification and Expression Analysis of the NAC Transcription Factor Family in Pineapple

2019 ◽  
Vol 12 (4) ◽  
pp. 255-267
Author(s):  
Qing He ◽  
Yanhui Liu ◽  
Man Zhang ◽  
Mengyan Bai ◽  
S. V. G. N. Priyadarshani ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Expression Analysis ◽  
Nac Transcription Factor ◽  
Transcription Factor Family ◽  
Genome Wide

scholarly journals Genome-Wide Survey and Expression Analysis of the Plant-Specific NAC Transcription Factor Family in Soybean During Development and Dehydration Stress

DNA Research ◽  
2011 ◽  
Vol 18 (4) ◽  
pp. 263-276 ◽  
Author(s):  
D. T. Le ◽  
R. Nishiyama ◽  
Y. Watanabe ◽  
K. Mochida ◽  
K. Yamaguchi-Shinozaki ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Expression Analysis ◽  
Nac Transcription Factor ◽  
Dehydration Stress ◽  
Transcription Factor Family ◽  
Genome Wide ◽  
Genome Wide Survey

scholarly journals Genome-wide characterization and expression profiling of NAC transcription factor genes under abiotic stresses in radish (Raphanus sativus L.)

PeerJ ◽  
2017 ◽  
Vol 5 ◽  
pp. e4172 ◽  
Author(s):  
Bernard Kinuthia Karanja ◽  
Liang Xu ◽  
Yan Wang ◽  
Everlyne M’mbone Muleke ◽  
Bashir Mohammed Jabir ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Abiotic Stresses ◽  
Expression Patterns ◽  
Hormone Signaling ◽  
Preferential Expression ◽  
Genome Wide ◽  
Raphanus Sativus L ◽  
Transcription Factor Genes ◽  
Membrane Bound ◽  
Polymerase Chain

NAC (NAM, no apical meristem; ATAF, Arabidopsis transcription activation factor and CUC, cup-shaped cotyledon) proteins are among the largest transcription factor (TF) families playing fundamental biological processes, including cell expansion and differentiation, and hormone signaling in response to biotic and abiotic stresses. In this study, 172 RsNACs comprising 17 membrane-bound members were identified from the whole radish genome. In total, 98 RsNAC genes were non-uniformly distributed across the nine radish chromosomes. In silico analysis revealed that expression patterns of several NAC genes were tissue-specific such as a preferential expression in roots and leaves. In addition, 21 representative NAC genes were selected to investigate their responses to heavy metals (HMs), salt, heat, drought and abscisic acid (ABA) stresses using real-time polymerase chain reaction (RT-qPCR). As a result, differential expressions among these genes were identified where RsNAC023 and RsNAC080 genes responded positively to all stresses except ABA, while RsNAC145 responded more actively to salt, heat and drought stresses compared with other genes. The results provides more valuable information and robust candidate genes for future functional analysis for improving abiotic stress tolerances in radish.

scholarly journals Genome-wide RNA-seq Analysis of Differentially Expressed Transcription Factor Genes Against Bacterial Leaf Pustule in Soybean

2015 ◽  
Vol 3 (3) ◽  
pp. 197-207 ◽  
Author(s):  
Kil Hyun Kim ◽  
Yang Jae Kang ◽  
Sangrea Shim ◽  
Min-Jung Seo ◽  
Seong-Bum Baek ◽  
...  
Keyword(s):  
Transcription Factor ◽  
Differentially Expressed ◽  
Rna Seq ◽  
Genome Wide ◽  
Transcription Factor Genes
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