Landscape genetic structure of Betula maximowicziana in the Chichibu mountain range, central Japan

2009 ◽  
Vol 6 (3) ◽  
pp. 377-387 ◽  
Author(s):  
Yoshiaki Tsuda ◽  
Haruo Sawada ◽  
Takafumi Ohsawa ◽  
Katsuhiro Nakao ◽  
Hiroki Nishikawa ◽  
...  
PeerJ ◽  
2019 ◽  
Vol 7 ◽  
pp. e6115 ◽  
Author(s):  
Angela M. Mendoza ◽  
Wilmar Bolívar-García ◽  
Ella Vázquez-Domínguez ◽  
Roberto Ibáñez ◽  
Gabriela Parra Olea

The complex geological history of Central America has been useful for understanding the processes influencing the distribution and diversity of multiple groups of organisms. Anurans are an excellent choice for such studies because they typically exhibit site fidelity and reduced movement. The objective of this work was to identify the impact of recognized geographic barriers on the genetic structure, phylogeographic patterns and divergence times of a wide-ranging amphibian species,Hyalinobatrachium fleischmanni. We amplified three mitochondrial regions, two coding (COI and ND1) and one ribosomal (16S), in samples collected from the coasts of Veracruz and Guerrero in Mexico to the humid forests of Chocó in Ecuador. We examined the biogeographic history of the species through spatial clustering analyses (Geneland and sPCA), Bayesian and maximum likelihood reconstructions, and spatiotemporal diffusion analysis. Our data suggest a Central American origin ofH. fleischmanniand two posterior independent dispersals towards North and South American regions. The first clade comprises individuals from Colombia, Ecuador, Panama and the sister speciesHyalinobatrachium tatayoi; this clade shows little structure, despite the presence of the Andes mountain range and the long distances between sampling sites. The second clade consists of individuals from Costa Rica, Nicaragua, and eastern Honduras with no apparent structure. The third clade includes individuals from western Honduras, Guatemala, and Mexico and displays deep population structure. Herein, we synthesize the impact of known geographic areas that act as barriers to glassfrog dispersal and demonstrated their effect of differentiatingH. fleischmanniinto three markedly isolated clades. The observed genetic structure is associated with an initial dispersal event from Central America followed by vicariance that likely occurred during the Pliocene. The southern samples are characterized by a very recent population expansion, likely related to sea-level and climatic oscillations during the Pleistocene, whereas the structure of the northern clade has probably been driven by dispersal through the Isthmus of Tehuantepec and isolation by the Motagua–Polochic–Jocotán fault system and the Mexican highlands.


2019 ◽  
Vol 9 (6) ◽  
pp. 3059-3074 ◽  
Author(s):  
Mei Yang ◽  
Chengyuan Xu ◽  
Pierre Duchesne ◽  
Qiang Ma ◽  
Ganqiang Yin ◽  
...  

2010 ◽  
Vol 11 (2) ◽  
pp. 583-599 ◽  
Author(s):  
Nadia Mucci ◽  
Johanna Arrendal ◽  
Hermann Ansorge ◽  
Michael Bailey ◽  
Michaela Bodner ◽  
...  

Biologia ◽  
2012 ◽  
Vol 67 (4) ◽  
Author(s):  
Ladislav Jedlička ◽  
Matúš Kúdela ◽  
Tomáš Szemes ◽  
Peter Celec

AbstractSimulium degrangei Dorier & Grenier, 1960 was recorded in southern and central Europe and in the Crimea and Caucasus. Its distribution pattern is scattered. The variability of the mtDNA gene encoding cytochrome oxidase I was studied in populations of S. degrangei from the Western Carpathians in Slovakia and in the northern Hellenides of Greece. In the analyzed samples, 21 haplotypes were recorded, of which twenty were private and occurred in only one mountain range, but one haplotype was found in all three studied populations from the Western Carpathians. Both haplotypes from the Hellenides were private, but these were not isolated and they fit into the haplotype network of the Western Carpathians. Statistics of genetic variability, different designs of analysis of molecular variation with non-significant differences and the pair-wise genetic distances support the hypothesis that there are no differences between the analyzed populations. Similarly, using nested clade phylogeographical analysis, no genetic-geographical structure was found.


2020 ◽  
Vol 63 (2) ◽  
pp. 15-26
Author(s):  
Mihai Fedorca ◽  
◽  
Ovidiu Ionescu ◽  
Neculae Șofletea ◽  
Ancuța Fedorca ◽  
...  

Romania holds the most extensive mountain range with oldgrowth forests, in which both habitat surface and capercaillie (Tetrao urogallus) numbers are ones of the highest in Central and Eastern Europe. While previous genetic studies have found that the individuals located in different European mountain ranges are isolated and have highlighted that the species is declining. Here, we are aiming to assess the genetic structure of capercaillie in Romania by genotyping 137 samples collected in the field with 9 STR markers. Expected heterozygosity was 0.586, whereas observed heterozygosity values were 0.859. Population structure analyses indicated weak population differentiation and suggested that sufficient gene flow exists among individuals sampled in different mountain regions. We did not find evidence for a past genetic bottleneck. Our findings contain important information to wildlife managers to focus conservation efforts in areas such as Curvature Carpathians, which serve as a connectivity corridor to avoid eroding the extent or quality of habitat and to prevent further fragmentation.


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