Genome‐wide characterization and expression analysis of TOPP-type protein phosphatases in soybean (Glycine max L.) reveal the role of GmTOPP13 in drought tolerance

2021 ◽  
Author(s):  
Sibo Wang ◽  
Jingsong Guo ◽  
Ying Zhang ◽  
Yushuang Guo ◽  
Wei Ji
Keyword(s):  
Glycine Max ◽  
Drought Tolerance ◽  
Expression Analysis ◽  
Protein Phosphatases ◽  
Type Protein ◽  
Genome Wide ◽  
Glycine Max L

Genome-wide identification and expression analysis of the YUCCA gene family in soybean (Glycine max L.)

2016 ◽  
Vol 81 (2) ◽  
pp. 265-275 ◽  
Author(s):  
Yuange Wang ◽  
Huaihua Liu ◽  
Shuping Wang ◽  
Hongjie Li
Keyword(s):  
Glycine Max ◽  
Gene Family ◽  
Expression Analysis ◽  
Genome Wide ◽  
Glycine Max L

scholarly journals Genome-Wide Sequence Characterization and Expression Analysis of Major Intrinsic Proteins in Soybean (Glycine max L.)

PLoS ONE ◽  
2013 ◽  
Vol 8 (2) ◽  
pp. e56312 ◽  
Author(s):  
Da Yong Zhang ◽  
Zulfiqar Ali ◽  
Chang Biao Wang ◽  
Ling Xu ◽  
Jin Xin Yi ◽  
...  
Keyword(s):  
Glycine Max ◽  
Expression Analysis ◽  
Sequence Characterization ◽  
Major Intrinsic Proteins ◽  
Genome Wide ◽  
Glycine Max L

scholarly journals Genome-Wide Identification and Expression Analysis of NRAMP Family Genes in Soybean (Glycine Max L.)

2017 ◽  
Vol 8 ◽  
Author(s):  
Lu Qin ◽  
Peipei Han ◽  
Liyu Chen ◽  
Thomas C. Walk ◽  
Yinshui Li ◽  
...  
Keyword(s):  
Glycine Max ◽  
Expression Analysis ◽  
Genome Wide ◽  
Glycine Max L

scholarly journals Prioritization and Evaluation of Flooding Tolerance Genes in Soybean [Glycine max (L.) Merr.]

2021 ◽  
Vol 11 ◽  
Author(s):  
Mu-Chien Lai ◽  
Zheng-Yuan Lai ◽  
Li-Hsin Jhan ◽  
Ya-Syuan Lai ◽  
Chung-Feng Kao
Keyword(s):  
Glycine Max ◽  
Genome Wide Association Study ◽  
Meta Analysis ◽  
Soybean Seeds ◽  
Flooding Tolerance ◽  
Big Data Mining ◽  
Genome Wide ◽  
Glycine Max L ◽  
Mapping Gene ◽  
Selection Of

Soybean [Glycine max (L.) Merr.] is one of the most important legume crops abundant in edible protein and oil in the world. In recent years there has been increasingly more drastic weather caused by climate change, with flooding, drought, and unevenly distributed rainfall gradually increasing in terms of the frequency and intensity worldwide. Severe flooding has caused extensive losses to soybean production and there is an urgent need to breed strong soybean seeds with high flooding tolerance. The present study demonstrates bioinformatics big data mining and integration, meta-analysis, gene mapping, gene prioritization, and systems biology for identifying prioritized genes of flooding tolerance in soybean. A total of 83 flooding tolerance genes (FTgenes), according to the appropriate cut-off point, were prioritized from 36,705 test genes collected from multidimensional genomic features linking to soybean flooding tolerance. Several validation results using independent samples from SoyNet, genome-wide association study, SoyBase, GO database, and transcriptome databases all exhibited excellent agreement, suggesting these 83 FTgenes were significantly superior to others. These results provide valuable information and contribution to research on the varieties selection of soybean.

scholarly journals Genome-wide identification and expression analysis of dormancy-associated gene 1/auxin repressed protein (DRM1/ARP) gene family in Glycine max

2019 ◽  
Vol 146 ◽  
pp. 134-141 ◽  
Author(s):  
Gilza Barcelos de Souza ◽  
Tiago Antônio de Oliveira Mendes ◽  
Patrícia Pereira Fontes ◽  
Vanessa de Almeida Barros ◽  
Amanda Bonoto Gonçalves ◽  
...  
Keyword(s):  
Glycine Max ◽  
Gene Family ◽  
Expression Analysis ◽  
Genome Wide
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