Genetic parameters and genotype-environment interaction for growth traits of North African catfish, Clarias gariepinus (Burchell, 1822)

Aquaculture ◽  
2019 ◽  
Vol 501 ◽  
pp. 104-110 ◽  
Author(s):  
Witsanu Srimai ◽  
Skorn Koonawootrittriron ◽  
Wiroon Manee-aphai ◽  
Satid Chatchaiphan ◽  
Urai Koolboon ◽  
...  
Keyword(s):  
Genetic Parameters ◽  
Growth Traits ◽  
Clarias Gariepinus ◽  
African Catfish ◽  
Environment Interaction ◽  
North African ◽  
Genotype Environment Interaction

Genetic parameters of reproductive traits in male and female North African catfish, Clarias gariepinus (Burchell, 1822)

Aquaculture ◽  
2019 ◽  
Vol 513 ◽  
pp. 734431 ◽  
Author(s):  
Witsanu Srimai ◽  
Skorn Koonawootrittriron ◽  
Wiroon Manee-aphai ◽  
Prapaiphan Chaivichoo ◽  
Anake Phu-onnim ◽  
...  
Keyword(s):  
Genetic Parameters ◽  
Clarias Gariepinus ◽  
Reproductive Traits ◽  
African Catfish ◽  
North African ◽  
Male And Female

Genetic components of growth traits of the hybrid between ♂North African catfish (Clarias gariepinus Burchell, 1822) and ♀bighead catfish (C. macrocephalus Günther, 1864)

Aquaculture ◽  
2020 ◽  
Vol 521 ◽  
pp. 735082
Author(s):  
Prapaiphan Chaivichoo ◽  
Skorn Koonawootrittriron ◽  
Satid Chatchaiphan ◽  
Witsanu Srimai ◽  
Uthairat Na-Nakorn
Keyword(s):  
Growth Traits ◽  
Clarias Gariepinus ◽  
African Catfish ◽  
North African ◽  
Genetic Components

Selection response and genetic parameters for growth in North African catfish, Clarias gariepinus (Burchell, 1822)

Aquaculture ◽  
2020 ◽  
Vol 518 ◽  
pp. 734843 ◽  
Author(s):  
Witsanu Srimai ◽  
Skorn Koonawootrittriron ◽  
Prapaiphan Chaivichoo ◽  
Wiroon Manee-aphai ◽  
Anake Phu-onnim ◽  
...  
Keyword(s):  
Genetic Parameters ◽  
Clarias Gariepinus ◽  
Selection Response ◽  
African Catfish ◽  
North African

Genetic parameters and genotype–environment interactions of Chinese fir (Cunninghamia lanceolata) in Fujian Province

2014 ◽  
Vol 44 (6) ◽  
pp. 582-592 ◽  
Author(s):  
Liming Bian ◽  
Jisen Shi ◽  
Renhua Zheng ◽  
Jinhui Chen ◽  
Harry X. Wu
Keyword(s):  
Genetic Parameters ◽  
Breeding Strategy ◽  
Chinese Fir ◽  
Breeding Program ◽  
Cunninghamia Lanceolata ◽  
Environment Interaction ◽  
Fujian Province ◽  
The Third ◽  
Genotype Environment Interaction ◽  
Sib Families

Chinese fir (Cunninghamia lanceolata (Lamb.) Hook) is the most commercially important conifer in China, and the Nanjing Forestry University – Fujian Province Chinese fir Cooperation (NJFU – Fujian Cooperation) breeding program has advanced it into the third cycle of selection and breeding. In this paper, we estimated genetic parameters from four sites for 80 half-sib families and summarized previous estimates of genetic parameters in Chinese fir with an objective to propose optimal breeding strategy. Heritability averaged 0.20 and 0.14 for height and diameter at breast height (DBH), respectively, for the four sites. A significant genotype–environment interaction (G × E) for growth was also observed among the four sites, with the greatest interactions between a marginal site and the three central sites in the Fujian Province Chinese fir plantation region. The average estimated type-B genetic correlation between the marginal site and the three central sites was 0.08 for height and –0.09 for DBH. However, the highly productive families were among the most stable across the four sites. The results from this study in combination with summarized genetic parameters from literature were used to discuss and propose an optimal breeding strategy for the third generation of the breeding program for Chinese firs in Fujian Province.

scholarly journals Genetic variability for girth growth and rubber yield in Hevea brasiliensis

2006 ◽  
Vol 63 (3) ◽  
pp. 246-254 ◽  
Author(s):  
Paulo de Souza Gonçalves ◽  
Marcelo de Almeida Silva ◽  
Ligia Regina Lima Gouvêa ◽  
Erivaldo José Scaloppi Junior
Keyword(s):  
Hevea Brasiliensis ◽  
Genetic Parameters ◽  
Genetic Correlations ◽  
Basic Knowledge ◽  
Environment Interaction ◽  
Genetic Characteristics ◽  
Genotype Environment Interaction ◽  
Genetic And Phenotypic Correlations ◽  
High Heritability ◽  
Selection Intensities

Basic knowledge of genetic characteristics of populations is necessary to conduct effective breeding and selection. The objective of this paper is describing the genetic variation of rubber yield and the correlation with other traits, and estimating the genetic parameters for girth growth and total number of latex vessels. Sixty seven clones of Hevea brasiliensis (Willd. ex Adr. de Juss.) Muell.-Arg. were tested at five sites during 10 years. Characters girth growth at panel opening and rubber yield, showed broad sense heritability on plot mean level, from 0.32 to 0.66 and 0.59 to 0.92, respectively. Predicted genetic gains equal to 0.73 cm and 0.79 g increase respectively on girth and yield in the opening panel and mature phases seems realistic, even with moderate selection intensities. Genetic correlations with rubber yield, bark thickness and total number of latex vessels were very large, and almost no genotype-environment interaction was present for girth growth. High genotype-environment interaction was present for rubber yield with genetic and phenotypic correlations across the sites, ranging from 0.64 to 0.92 (genetic) and 0.63 to 0.89 (phenotypic). Total number of latex vessels rings had a high heritability, ranging from 20.0% to 64.0% in the sites E and B, respectively.

scholarly journals Genotype-environment interaction, genetic trends, and performance dissimilarity of Nellore herds raised in three different environmental gradients

2018 ◽  
Vol 39 (1) ◽  
pp. 349
Author(s):  
Julio Cesar de Souza ◽  
Fabio Rafael Leão Fialho ◽  
Marcos Paulo Gonçalves Rezende ◽  
Carlos Henrique Cavallari Machado ◽  
Mariana Pereira Alencar ◽  
...  
Keyword(s):  
Weight Gain ◽  
Fixed Effects ◽  
Genetic Parameters ◽  
Environmental Gradients ◽  
Superior Performance ◽  
Environment Interaction ◽  
Genotype Environment Interaction ◽  
And Performance ◽  
Main Components ◽  
Genetic Trends

The objectives of this work were to evaluate the genotype-environment interaction, and estimate genetic parameters, genetic trends, and performance dissimilarity-weight gain from birth to weaning (WGBW), adjusted weight to 205 days (W205), weight gain from weaning to 18 months of age (WG18), and adjusted weight to 550 days (W550)-in Nellore animals born between 1986 and 2012, and raised in pasture-based system in three different environmental gradients in Brazil. Data of 62,001 animals-11,729 raised in the Alto Taquari/Bolsão region (ATBR), 21,143 raised in the Campo Grande/Dourados region (CGDR) and 29,129 raised in the western São Paulo/Paraná region (SPPR) in Brazil-were used. The contemporary groups were defined by sex, location, and birth year and season, with at least nine individuals, two different environments, and breeding bulls with at least five progenies. The statistical model contained the direct additive and residual genetic effects (random effects), and environmental and contemporary group effects (fixed effects). Genetic parameters, genotype-environment interaction and genetic trends were estimates using animal model (uni- and/or bi- traits). The level of similarity between regions was evaluated using principal components. The animals raised in the CGDR had superior performance regarding the traits evaluated. The direct heritability estimates ranged from 0.39 to 0.44 (WGBW), 0.41 to 0.45 (W205), 0.42 to 0.55 (WG18) and 0.60 to 0.62 (W550). The maternal heritability of the traits ranged from 0.20 (WGBW), 0.12 to 0.18 (W205), 0.00 to 0.06 (WG18) and 0.02 to 0.22 (W550). According to the Spearman correlation, the ranking of the breeding bulls in the regions evaluated were different. The mean of Euclidean distance indicated low similarity between ATBR and CGDR (43.20), and ATBR and SPPR (29.24). CGDR and SPPR presented similarity of 17.84. The breed values increased over the years in the traits evaluated. The cumulative variance percentage of the first two main components explained 99.99% variation among the regions, and the weight gains of the animals were the most important to differentiate the regions. A genotype-environment interaction was found for the traits evaluated, thus, the breeding bull selected with superior genetic merit for one region might not be the best for others.

scholarly journals An Investigation of ZZ/ZW and XX/XY Sex Determination Systems in North African Catfish (Clarias gariepinus, Burchell, 1822)

2021 ◽  
Vol 11 ◽  
Author(s):  
Dung Ho My Nguyen ◽  
Thitipong Panthum ◽  
Jatupong Ponjarat ◽  
Nararat Laopichienpong ◽  
Ekaphan Kraichak ◽  
...  
Keyword(s):  
Sex Determination ◽  
Clarias Gariepinus ◽  
African Catfish ◽  
Nucleotide Polymorphisms ◽  
North African ◽  
The North ◽  
Determination System ◽  
Commercial Breeding ◽  
Sex Determination System ◽  
Sex Determination Mechanisms

An investigation of sex-specific loci may provide important insights into fish sex determination strategies. This may be useful for biotechnological purposes, for example, to produce all-male or all-female fish for commercial breeding. The North African catfish species, Clarias gariepinus, has been widely adopted for aquaculture because its superior growth and disease resistance render the species suitable for hybridization with other catfish to improve the productivity and quality of fish meat. This species has either a ZZ/ZW or XX/XY sex determination system. Here, we investigate and characterize these systems using high-throughput genome complexity reduction sequencing as Diversity Arrays Technology. This approach was effective in identifying moderately sex-linked loci with both single-nucleotide polymorphisms (SNPs) and restriction fragment presence/absence (PA) markers in 30 perfectly sexed individuals of C. gariepinus. However, SNPs based markers were not found in this study. In total, 41 loci met the criteria for being moderately male-linked (with male vs. female ratios 80:20 and 70:30), while 25 loci were found to be moderately linked to female sex. No strictly male- or female-linked loci were detected. Seven moderately male-linked loci were partially homologous to some classes of transposable elements and three moderately male-linked loci were partially homologous to functional genes. Our data showed that the male heterogametic XX/XY sex determination system should co-exist with the ZZ/ZW system in C. gariepinus. Our finding of the co-existence of XX/XY and ZZ/ZW systems can be applied to benefit commercial breeding of this species in Thailand. This approach using moderately sex-linked loci provides a solid baseline for revealing sex determination mechanisms and identify potential sex determination regions in catfish, allowing further investigation of genetic improvements in breeding programs.

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