scholarly journals Epigenetic regulation of DAT gene promoter modulates the risk of Externalizing and Internalizing behaviors on a normative population: an explorative study

2021 ◽  
pp. 113246
Author(s):  
Valentina Carpentieri ◽  
Luca Cerniglia ◽  
Silvia Cimino ◽  
Mariangela Pucci ◽  
Esterina Pascale ◽  
...  
2007 ◽  
Vol 67 (6) ◽  
pp. 2577-2585 ◽  
Author(s):  
Inti A. De La Rosa-Velázquez ◽  
Héctor Rincón-Arano ◽  
Luis Benítez-Bribiesca ◽  
Félix Recillas-Targa

2010 ◽  
Vol 22 (9) ◽  
pp. 113
Author(s):  
X. Pan ◽  
C. Abou-Seif ◽  
M. Allars ◽  
Y. Chen ◽  
R. C. Nicholson

Corticotropin Releasing Hormone (CRH), is expressed in many regions of the central nervous system and in some peripheral tissues, and plays an important role in determining gestational length. In placenta, a cAMP regulatory site (CRE) is crucial for CRH gene regulation. The promoter of CRH gene has 9 CpG sites, which should be the targets of epigenetic regulation by DNA methylation. The BeWo cell line, derived from human gestational choriocarcinoma, has been widely used as an in vitro model for the placenta. BeWo cells only produce CRH after exposure to cAMP. The DNA methyl transferase (DNMT) inhibitor 5-aza-cytidine stimulates CRH expression 5-fold in camp treated BeWo cells, indicating the CRH promoter as a target of DNMTs. To evaluate methylation differences of the 9 CpG sites in CRH gene promoter in BeWo cells after treatment with cAMP. Genomic DNA was extracted from BeWo cells treated or not with cAMP. Sodium bisulfite conversion was used to modify the genomic DNA. PCR was used to amplify the CRH promoter region with primers that did not contain CpG sites. The PCR products were cloned and sequenced. The CpG methylation status of each sample was obtained by comparing the sequencing results with the original sequence. In non-stimulated cells (control) CpG -4 was methylated in 50% of the clones and CpG -6 was methylated in 75% of the clones, but the other 7 sites were methylated in every clone. In the cAMP treated cells however there was 100% methylation at CpG sites 6 through 9, but only partial methylation at CpG-1 and 3 (60%), CpG-4 and 5 (40%). Most interestingly, there was no methylation found at CpG-2 in any of the clones from cAMP treated cells, indicating that specific CpG de-methylation around the CRE is required for CRH gene expression.


2019 ◽  
Vol 58 (6) ◽  
pp. 887-897 ◽  
Author(s):  
Iván Meneses‐Morales ◽  
Eduardo Izquierdo‐Torres ◽  
Lucía Flores‐Peredo ◽  
Gabriela Rodríguez ◽  
Andrés Hernández‐Oliveras ◽  
...  

2008 ◽  
Vol 199 (6) ◽  
pp. S168
Author(s):  
Joel Larma ◽  
Begona Campos ◽  
Leslie Myatt

2011 ◽  
Vol 10 (11) ◽  
pp. 1465-1472 ◽  
Author(s):  
Dilrukshi Ekanayake ◽  
Robert Sabatini

ABSTRACT Very little is understood regarding how transcription is initiated/regulated in the early-diverging eukaryote Trypanosoma cruzi . Unusually for a eukaryote, genes transcribed by RNA polymerase (Pol) II in T. cruzi are arranged in polycistronic transcription units (PTUs). On the basis of this gene organization, it was previously thought that trypanosomes rely solely on posttranscriptional processes to regulate gene expression. We recently localized a novel glucosylated thymine DNA base, called base J, to potential promoter regions of PTUs throughout the trypanosome genome. Loss of base J, following the deletion of JBP1, a thymidine hydroxylase involved with synthesis, led to a global increase in the Pol II transcription rate and gene expression. In order to determine the mechanism by which base J regulates transcription, we have characterized changes in chromatin structure and Pol II recruitment to promoter regions following the loss of base J. The loss of base J coincides with a decrease in nucleosome abundance, increased histone H3/H4 acetylation, and increased Pol II occupancy at promoter regions, including the well-characterized spliced leader RNA gene promoter. These studies present the first direct evidence for epigenetic regulation of Pol II transcription initiation via DNA modification and chromatin structure in kinetoplastids as well as provide a mechanism for regulation of trypanosome gene expression via the novel hypermodified base J.


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